BAC Information

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BAC

Clone NameB6Ng01-067B05
Chromosome6 (Build37)
Map Location 142,699,802 - 142,804,353
singlet/doubletdoublet
Overlap geneCmas, Gm766, EG665037, St8sia1
Upstream geneEG435927, Slco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik
Downstream geneLOC665056, 5730419I09Rik, Etnk1, D6Ertd474e, Sox5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067B05.bB6Ng01-067B05.g
ACCDH886074DH886075
length850449
definitionDH886074|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B05, 5' end.DH886075|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,699,802 - 142,700,651)(142,803,899 - 142,804,353)
sequence
gaattcttcctcatccaagccaggcaaatatcacaagaaactagagatgc
aagatgtcagttcgggaactttagaaaattccactggaattttctcccct
cctggaagcgaaaggtcataaagaccataggcacctctcctgtccggaag
ggaggggctagttacagtcctcagaccacgaggaggaggggccaaccacc
agagctcatagactcattcggataccattggccacccacctctttcccta
taggccaatcagtttaaacgtcacactgctctgccaatcacattgtgcct
aatgggtgctgcctggagaactgtataatggctcaacggacaggctgtgc
gtgctcattctctctctccatgtgcagggcgactccaacatgttggaaca
ataaattcctcttgctttttgcatcagttcccagctctcactcagggagt
ccccagtaagctaaagctctccagcgtcttacaagaccactagaccccat
ggcagtgattctcaaccatcctaaggctgaggctttaatacagttcttca
tgttgttgtgacccccaaccataaaattggctttattgctacttcataac
tgtaatgctgctgctgttatgaatcacaatggtaacgtgtgtgttttctg
ttgttcttagacgacccctgtgaaaggatcattaaacctccacagggatc
ggcacccacagattgcaaaccattgccttctgtccttctctgtccccttg
ctttctctgcctcttctcccttcgccagacctccttcccatgtcccagat
aagcttccttttatactggacccatcattgggctaagatggggggggggg

aaagtcctcggctacataactataaccaggttaggtggtggattgcagtg
tgtgtgggtgagagagagagagagagagagagagagagagaccttgttta
cacatatatatacctacaaagaaatcaagagaaagaccaaatacatgaaa
ggaaaagggaaagaagaaaggaagaaagaaagaacagataggcagatgga
cggacagacggatggacagatgacctcagggaccttttctctatgagtaa
tttgtaagggaccaatggtaggatggaatggaatgtaagttgttgcttct
tacattcctttaactaggaaagtgctcaatggcaggaatctcctggggtt
tgtatgtaacatcgtctttttttttcccccctaaagatttgatttatttt
atgttagtatactgtcattgtcttcagagacaccataatagggcatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_142699802_142700651
seq2: B6Ng01-067B05.b_47_896

seq1  GAATTCTTCCTCATCCAAGCCAGGCAAATATCACAAGAAACTAGAGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTCATCCAAGCCAGGCAAATATCACAAGAAACTAGAGATGC  50

seq1  AAGATGTCAGTTCGGGAACTTTAGAAAATTCCACTGGAATTTTCTCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCAGTTCGGGAACTTTAGAAAATTCCACTGGAATTTTCTCCCCT  100

seq1  CCTGGAAGCGAAAGGTCATAAAGACCATAGGCACCTCTCCTGTCCGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGCGAAAGGTCATAAAGACCATAGGCACCTCTCCTGTCCGGAAG  150

seq1  GGAGGGGCTAGTTACAGTCCTCAGACCACGAGGAGGAGGGGCCAACCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGCTAGTTACAGTCCTCAGACCACGAGGAGGAGGGGCCAACCACC  200

seq1  AGAGCTCATAGACTCATTCGGATACCATTGGCCACCCACCTCTTTCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCATAGACTCATTCGGATACCATTGGCCACCCACCTCTTTCCCTA  250

seq1  TAGGCCAATCAGTTTAAACGTCACACTGCTCTGCCAATCACATTGTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCAATCAGTTTAAACGTCACACTGCTCTGCCAATCACATTGTGCCT  300

seq1  AATGGGTGCTGCCTGGAGAACTGTATAATGGCTCAACGGACAGGCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTGCTGCCTGGAGAACTGTATAATGGCTCAACGGACAGGCTGTGC  350

seq1  GTGCTCATTCTCTCTCTCCATGTGCAGGGCGACTCCAACATGTTGGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATTCTCTCTCTCCATGTGCAGGGCGACTCCAACATGTTGGAACA  400

seq1  ATAAATTCCTCTTGCTTTTTGCATCAGTTCCCAGCTCTCACTCAGGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCCTCTTGCTTTTTGCATCAGTTCCCAGCTCTCACTCAGGGAGT  450

seq1  CCCCAGTAAGCTAAAGCTCTCCAGCGTCTTACAAGACCACTAGACCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTAAGCTAAAGCTCTCCAGCGTCTTACAAGACCACTAGACCCCAT  500

seq1  GGCAGTGATTCTCAACCATCCTAAGGCTGAGGCTTTAATACAGTTCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGATTCTCAACCATCCTAAGGCTGAGGCTTTAATACAGTTCTTCA  550

seq1  TGTTGTTGTGACCCCCAACCATAAAATTGGCTTTATTGCTACTTCATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTGACCCCCAACCATAAAATTGGCTTTATTGCTACTTCATAAC  600

seq1  TGTAATGCTGCTGCTGTTATGAATCACAATGGTAACGTGTGTGTTTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGCTGCTGCTGTTATGAATCACAATGGTAACGTGTGTGTTTTCTG  650

seq1  TTGTTCTTAGACGACCCCTGTGAAAGGATCATTAAACCTCCACAGGGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTAGACGACCCCTGTGAAAGGATCATTAAACCTCCACAGGGATC  700

seq1  GGCACCCACAGATTGCAAACCATTGCCTTCTGTCCTTCTCTGTCCCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCACAGATTGCAAACCATTGCCTTCTGTCCTTCTCTGTCCCCTTG  750

seq1  CTTTCTCTGCCTCTTCTCCCTTCGCCAGACCTCCTTCCCATGTCCCAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTGCCTCTTCTCCCTTCGCCAGACCTCCTTCCCATGTCCCAGAT  800

seq1  AAGCTTCCTTTTATACTGGACCCATCATTGGGCTAAGATGGGGGGGGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCTTTTATACTGGACCCATCATTGGGCTAAGATGGGGGGGGGGG  850

seq1: chr6_142803899_142804353
seq2: B6Ng01-067B05.g_69_523 (reverse)

seq1  GTCATGCCCTCTTCTGGTGTCTCTGAAGACAATGACAGTATACTAACATA  50
      |||||||||| || ||||||||||||||||||||||||||||||||||||
seq2  GTCATGCCCTATTATGGTGTCTCTGAAGACAATGACAGTATACTAACATA  50

seq1  AAATAAATCAAATCTTTAGGGGGGAAAAAAAAAGACGATGTTACATCCAA  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATAAATCAAATCTTTAGGGGGGAAAAAAAAAGACGATGTTACATACAA  100

seq1  ACCCCAGGAGATTCCTGCCATTGCGCACTTTCCTAGTTAAAGGAATGTAA  150
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACCCCAGGAGATTCCTGCCATTGAGCACTTTCCTAGTTAAAGGAATGTAA  150

seq1  GAAGCAACAACTTACATTCCATTCCATCCTACCATTGGTCCCTTACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAACAACTTACATTCCATTCCATCCTACCATTGGTCCCTTACAAAT  200

seq1  TACTCATAGAGAAAAGGTCCCTGAGGTCATCTGTCCATCCGTCTGTCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATAGAGAAAAGGTCCCTGAGGTCATCTGTCCATCCGTCTGTCCGT  250

seq1  CCATCTGCCTATCTGTTCTTTCTTTCTTCCTTTCTTCTTTCCCTTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCCTATCTGTTCTTTCTTTCTTCCTTTCTTCTTTCCCTTTTCCT  300

seq1  TTCATGTATTTGGTCTTTCTCTTGATTTCTTTGTAGGTATATATTTGTGT  350
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCATGTATTTGGTCTTTCTCTTGATTTCTTTGTAGGTATATATATGTGT  350

seq1  AAACAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCACACAC  400

seq1  ACTGCAATCCACCACCTAACCTGGTTATAGTTATGTAGCCGAGGACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAATCCACCACCTAACCTGGTTATAGTTATGTAGCCGAGGACTTTG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455