BAC Information

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BAC

Clone NameB6Ng01-067D02
Chromosome6 (Build37)
Map Location 22,400,318 - 22,401,140
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnd2, Tspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948
Downstream geneLOC100040959, LOC668018, LOC668022, Ptprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067D02.bB6Ng01-067D02.g
ACCDH886158DH886159
length1,086824
definitionDH886158|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D02, 5' end.DH886159|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaagattaagacagggagatctctgagttcaaggtcatctgg
aaataaaggtgtggtggcaccttctgctggagacatacataaggacattg
gaagaaggaaggctctctctctctctccctcaactgcttgccgtgttgga
ctgggcaactgctagatccttggacttccattcacagttgctactgacca
ttgttgggagttagactgcagactgtaagtcatcaacaagttcctttact
atatagagactactcataagttctgtgactctagagaacactgactaata
caataattgagagttttgctgggtatagtagcctgggctggcatttatgt
tcccttagagtctgtatgacatctgtccaggatcttctaactttcatagt
ctctgttaagaagtctggtggaattcttataggtttgcctttatatttta
cttgaccttttccccttactgcttttaaaaatctttctttgtttagtgca
tttagtgttttgattattatatgatgggagaaatttcttttatggtccag
tctatttggacttctgtagatttcttgtatgttcatgggcatctctttct
ttaggtttgggaagttttcttctataattttgttgaagatatttactggc
cctttagtttgggaatctttcttcttctatacctattatccttagctttc
atctcctcattgtgtcctggatttcctggatattttgtgttaggagcttt
ttgctttttgcattttctttgttgtgtcaatgttttctatggtatcttct
gcactcttctatctcttgtactctgttggtgatgcttgcatctatgactc
ctgatctctttcctaggttttctaactccaggttgtctccctttgtgatt
tctttattgtttctgtttcatttttagatcttggatggtttgtttatttc
tttgcctgtttgattgtgttttcctgtaatcttaaaggatttttgtgttt
ctctttagggctttactgtttactgggctctcctgatttctttagaaagt
atttatgtcctcgaaagtccctcatccccatcatga
gaattccttaagcttttagctagcagcaccagcagcttgagagagtggct
tcttctataaagtctatgggtataggcagccagtttttctttccaggttc
aggtcagagataaacagaaaaggatctcagatgatagggtccttaaattg
agttcttaaggcaagcctgggtgcaaggagttggagatacaacagcaact
cacagtaagagcaaattccttgcatgtatgaattttagaaggtggatatc
tctgagcttagaggggaagggcatcaaattaagaagattagtgaaagtag
gtactagataagataccaagcagtggtttaactgttccattccccataga
gactgttacagagtaggctaagctttaaggaaagctctagataggatata
gagtgtgctctcctctccttggggcaacctctgtggtctaacagttctga
taagaaagatattctaggagatatttgaaggcttcaggctgagtggagca
gggtggccaagtgtgcacactggcagatgaaactcaaggcactccattgg
cccacctaaggactcagatattgcttttgttttctgggtagatttccctt
ttcatgctcttccgggtgcagtagctactgacagtaggggtgggggtggg
actctagttccaggcagcttcacttcattcccccaggtatgccagatatt
tatctctggacagtattaatgcatgaggtcctttcaagtggaaatcaggg
aggaccttcctgtttgactgtccctcattcagcctgttgaggctgagacc
caatgactcactctcattctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22400318_22401140
seq2: B6Ng01-067D02.g_68_891

seq1  GAATTCCTTAAGCTTTTAGCTAGCAGCACCAGCAGCTTGAGAGAGTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGCTTTTAGCTAGCAGCACCAGCAGCTTGAGAGAGTGGCT  50

seq1  TCTTCTATAAAGTCTATGGGTATAGGCAGCCAGTTTTTCTTTCCAGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTATAAAGTCTATGGGTATAGGCAGCCAGTTTTTCTTTCCAGGTTC  100

seq1  AGGTCAGAGATAAACAGAAAAGGATCTCAGATGATAGGGTCCTTAAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAGATAAACAGAAAAGGATCTCAGATGATAGGGTCCTTAAATTG  150

seq1  AGTTCTTAAGGCAAGCCTGGGTGCAAGGAGTTGGAGATACAACAGCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAAGGCAAGCCTGGGTGCAAGGAGTTGGAGATACAACAGCAACT  200

seq1  CACAGTAAGAGCAAATTCCTTGCATGTATGAATTTTAGAAGGTGGATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAGAGCAAATTCCTTGCATGTATGAATTTTAGAAGGTGGATATC  250

seq1  TCTGAGCTTAGAGGGGAAGGGCATCAAATTAAGAAGATTAGTGAAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTTAGAGGGGAAGGGCATCAAATTAAGAAGATTAGTGAAAGTAG  300

seq1  GTACTAGATAAGATACCAAGCAGTGGTTTAACTGTTCCATTCCCCATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGATAAGATACCAAGCAGTGGTTTAACTGTTCCATTCCCCATAGA  350

seq1  GACTGTTACAGAGTAGGCTAAGCTTTAAGGAAAGCTCTAGATAGGATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTACAGAGTAGGCTAAGCTTTAAGGAAAGCTCTAGATAGGATATA  400

seq1  GAGTGTGCTCTCCTCTCCTTGGGGCAACCTCTGTGGTCTAACAGTTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCTCTCCTCTCCTTGGGGCAACCTCTGTGGTCTAACAGTTCTGA  450

seq1  TAAGAAAGATATTCTAGGAGATATTTGAAGGCTTCAGGCTGAGTGGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGATATTCTAGGAGATATTTGAAGGCTTCAGGCTGAGTGGAGCA  500

seq1  GGGTGGCCAAGTGTGCACACTGGCAGATGAAACTCAAGGCACTCCATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCCAAGTGTGCACACTGGCAGATGAAACTCAAGGCACTCCATTGG  550

seq1  CCCACCTAAGGACTCAGATATTGCTTTTGTTTTCTGGGTAGATTTCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTAAGGACTCAGATATTGCTTTTGTTTTCTGGGTAGATTTCCCTT  600

seq1  TTCATGCTCTTCCGGGTGCAGTAGCTACTGACAGTAGGGGTGGGGGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCTCTTCCGGGTGCAGTAGCTACTGACAGTAGGGGTGGGGGTGGG  650

seq1  ACTCTAGTTCCAGGCAGCTTCACTTCATTCCCCCAGGTATGCCAGATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGTTCCAGGCAGCTTCACTTCATTCCCCCAGGTATGCCAGATATT  700

seq1  TATCTCTGGACAGTATTAATGCATGAGGTCCTTTCAAGTGGAAATCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGGACAGTATTAATGCATGAGGTCCTTTCAAGTGGAAATCAGGG  750

seq1  AGGACCTTCCTGTTTGACTGTCCCTCAGTCAGCCTGTTGAGGCTGAGACC  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGACCTTCCTGTTTGACTGTCCCTCATTCAGCCTGTTGAGGCTGAGACC  800

seq1  CAATGACTCACTCTCA-TCTCCCT  823
      |||||||||||||||| |||||||
seq2  CAATGACTCACTCTCATTCTCCCT  824