BAC Information

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BAC

Clone NameB6Ng01-067F12
Chromosome6 (Build37)5 (Build37)
Map Location 124,165,917 - 124,166,44651,610,192 - 51,610,756
singlet/doubletsingletsinglet
Overlap geneVmn2r27
Upstream genePpia-ps6_1344.1, Clec4n, Clec4d, Clec4e, EG232358, EG667180, LOC626436, EG546912, LOC100043511, Vmn2r-ps32, EG546913, LOC100043516, EG435916, EG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34
Downstream geneLOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s, LOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067F12.bB6Ng01-067F12.g
ACCDH886262DH886263
length972699
definitionDH886262|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F12, 5' end.DH886263|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(124,165,917 - 124,166,446)(51,610,192 - 51,610,756)
sequence
gaattcttctacatgataacaacaagttgtgcctgcaccatttgttgaaa
atgttgtcttttttccactggatggttttagctcccttgtcaaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtcactataccagtaccatgcagtttttatcacaatt
gctctgtagtacagctttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctaggttttttgttattccaga
tgaatttgcagattgccctttctaatttgttgaagaattgagttggaatt
ttgatggggattgcattgaatctgtagattgcttttggcaaaatacccat
ttttactatattgatcctgtcaatccatgagcatgggagatcttttcatc
ttctctgatcttctttaatttctttcttcagagacttgaagttcttatca
tacagatctttctcttccttagttaaagtcatgccaaggtattttatatt
atttgtgactattgagaagggtgttgtttccctaacttctttctcagcct
gtttattctttgtgtagagaaaggccattgacttctttgagttaatttta
tatccagctacttcactgaagctgtttatcaggcttaggagttctctggt
ggaatttttagggtcacttatatataatatcatatcatctgaaaagagtg
atatttttgacttcttcctttccaatttgtttccccttgatctccttttg
ttgtctaattgctctggctaggacttcaagtacaatgttgaaataggtag
ggagagagtggacagccttgtctagtccctgatttttgtgggattgtttc
cagcttcgcaccatatctttgatgtgggtactggttgctgtaattgcttt
tattatgtttaggtatgggcct
gaattcctgatctttccaagacttttatcatgaatgggtttggctcttgt
caaatgctttttctgcatctaaggagatgatcatgtggtttttgtctttg
agtttgtttatataatggattacattgatggattttcatatattaaacca
tccctgcatccctggaataaaacctacttggtgaggatggatgattgcct
taatgtgttcttggattcgggtagggagaattttattgaggatttttgca
tcgatattcataagagaaattggtctgaagttctctatctttgttgggtc
tttctgtggtttaggtatcagagtaatagtggcttaataaaatgagttgg
gtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaacctgtctgg
tcctggcctttttttggctgggagattactaataactgcttctatttctt
taggggatatgggactgtttagatggtcaacttgatcctgattcaacttt
gtacctggtatctgtccagaaatttgtccatttcgcccaggttttccagt
tttgttgagtatagcctttttgtagaaggatctgatggtgttttggattt
cttcaggctctgttgttatgtctccctttcatttctgattttgtaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124165917_124166446
seq2: B6Ng01-067F12.b_491_1018 (reverse)

seq1  AGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCA  50
      |||||||||||||||||| ||||||||||| |||||| |||||||| || 
seq2  AGGCCCATACCTAAACATAATAAAAGCAAT-TACAGC-AACCAGTA-CCC  47

seq1  ACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGG  100
      ||||||||| | |||| | |||||||||| ||||||||| ||||||||||
seq2  ACATCAAAG-ATATGGTGCGAAGCTGGAAACAATCCCACAAAAATCAGGG  96

seq1  ACTAGACAAGGCTGCCCACTTTCTCCCTACCT-TTTCAACATAGTACTTG  149
      |||||||||||||| ||||| ||||||||||| ||||||||| |||||||
seq2  ACTAGACAAGGCTGTCCACTCTCTCCCTACCTATTTCAACATTGTACTTG  146

seq1  AAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAA  199
      ||||  |||||||||||||| |||||||||||||||||||||||| ||||
seq2  AAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGAAACAA  196

seq1  ATTGGAAAGGAGGAAGTC-AAAATATCACTTTTTGCAGATGATATGATAG  248
      ||||||||||| |||||| ||||||||||| ||| |||||||||||||| 
seq2  ATTGGAAAGGAAGAAGTCAAAAATATCACTCTTTTCAGATGATATGATAT  246

seq1  TATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATA  298
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAGCCTGATA  296

seq1  AACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAAT  348
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  AACAGCTTCAGTGAAGTAGCTGGATATAAAATTAACTCAAAGAAGTCAAT  346

seq1  GGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAA  398
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAGTTAGGGAAA  396

seq1  CAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTCGGCATGACT  448
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  CAACACCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCATGACT  446

seq1  CTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAA  498
       |||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TTAACTAAGGAAGAGAAAGATCTGTATGATAAGAACTTCAAGTCTCTGAA  496

seq1  GAAAGAAATTAAAGAAGATCTCAGAAGATGGA  530
      ||||||||||||||||||||  |||||||| |
seq2  GAAAGAAATTAAAGAAGATCAGAGAAGATGAA  528

seq1: chr5_51610192_51610756
seq2: B6Ng01-067F12.g_204_767 (reverse)

seq1  AATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAG  50
      |||| ||||||||||||||| ||||||||||||||||||||| |||||||
seq2  AATTTACAAAATCAGAAATG-AAAGGGAGACATAACAACAGAGCCTGAAG  49

seq1  AAATCCAAAACACCATCAGATCCTTCTAC-AAAAGGCTATACTCAACAAA  99
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAATCCAAAACACCATCAGATCCTTCTACAAAAAGGCTATACTCAACAAA  99

seq1  ACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTAC  149
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  ACTGGAAAACCTGGGCGAAATGGACAAATTTCTGGACAGATACCAGGTA-  148

seq1  CAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCT  199
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCCCCT  198

seq1  AAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGG  249
      |||||||||||||||||||||| || |||||||||||||||||| |||||
seq2  AAAGAAATAGAAGCAGTTATTAGTAATCTCCCAGCCAAAAAAAGGCCAGG  248

seq1  ACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAAATCTAA  299
      ||||||| ||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCAGACAGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAA  298

seq1  TTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTA  348

seq1  CCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAA  399
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCAACTCATTTTATTAAGCCACTATTACTCTGATACCTAAACCACAGAA  398

seq1  AGACCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATCG  448

seq1  ATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAACACATT  499
      |||||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  ATGCAAAAATCCTCAATAAAATTCTCCCTACCCGAATCCAAGAACACATT  498

seq1  AAAGCAATCATCCATACTGACCAAGTAGGTTTTATTCCAGGGATGCAGGG  549
      || |||||||||||| || |||||||||||||||||||||||||||||||
seq2  AAGGCAATCATCCATCCTCACCAAGTAGGTTTTATTCCAGGGATGCAGGG  548

seq1  ATGGTTTAATATACGA  565
      ||||||||||||| ||
seq2  ATGGTTTAATATATGA  564