BAC Information

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BAC

Clone NameB6Ng01-067H02
Chromosome6 (Build37)
Map Location 33,671,618 - 33,814,200
singlet/doubletdoublet
Overlap geneExoc4
Upstream geneChchd3, LOC100039118, Gm1401
Downstream geneLrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067H02.bB6Ng01-067H02.g
ACCDH886332DH886333
length1,084795
definitionDH886332|Mus musculus domesticus DNA, BAC clone: B6Ng01-067H02, 5' end.DH886333|Mus musculus domesticus DNA, BAC clone: B6Ng01-067H02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,671,618 - 33,672,714)(33,813,405 - 33,814,200)
sequence
gaattcatcaatcctgactactagttatttgtcaaaatgctacattagga
aataaaatgtttctgcatatctaggtttcctaaaataaatgtaacctctg
agggtatgcaagcattctaggattcatactagttagatgcttgggcccct
gggcttacaaataagcaaatatccttccttggttttggaaaactgttgga
ttatttcagatcacacacatacacccatctttggggccttgagggcatta
acattaatggaagtgatgcaaaattcaattaaaaattatctgatgctccc
tgcatgtcgatttcactctacaaggagcctcttctgcagaatctgcctga
acagatgagactcggcacaggcagggagaaagctgtcagaggagaaattt
caaataagggcagaaaaatgatcccaacatgggagccctcttcacaacat
tacccttagcagaagtagagcctagggcaagtcacattataatagaccta
aaatattttaaatgaatgccaaggaagactgctactttagattaaatgtt
cctaggactagagtaaataaccataattgaacatgcagagagactatagt
gatatcaaagtctgattgcattgtgtggactatacaggacaaaataaggt
tctggagacctatttcctggcttaaagggcatgacactaatggattctac
cctagtcacaagcctgaggcatgggagagaatcatgccagagtggaaaga
ctcaaatatcaagacagaccagggtttaaattcaagctgtgtccttcaat
tccctactggctttcagcaactactgtacttcatctataaaatgagaata
atgtgattgggccttgtgggacatgtctgtaatcccacacttacaagact
aaaacaggagtaatgtaagagtcctgcaaataacgcaaaacccttcttgg
aaaattgatatcattctcatagaggtctaggaagactgaaatgaaactca
tttcatctgatggtacgtggtatctagcatacgcaaagtattttaattta
tttacttatttaaggatatggctgttttacctac
gaattcatgcagtgactagctttagaggttacaaattgttttgtctcatg
aaacccactgagaatggacagactataagtccaatatgctgtaccactcg
aaatttaaaaaatgtatataaaatgttagatattacacatataatatgta
tgtatatataaatatatatgtgtatatatttatagctataaatccaacta
tagctctgccacaaaacaaaaagatcccttctaaacatcactgagaaata
tacctgtattcacaggagccaaaagaaaccaggaaaagcgggacctggtc
cctattcagagcagtttgcatttattaaagagaaaattagctctgaattt
ttagagagaggaaggacagagtgggtctaggagagaaaaggttgattcca
gtggctgcttgagacagaactgtgattatgaaattgtatagctggagtag
cctttcacagacagctcttgatgcagactgctcaaatgtaataccatgcc
caaactaccccaaaccgggacagtttctatttgtgcagacttctgagaat
taacatgtgtaattttatagttagataaaaatattttacataaagtgtaa
gtgactctttgacagaattgccaaccacactctttgtccgcaccctcttc
tgctctgcatcagctgtggagaggggaaagtgcccagcctagagggcaca
agcaatgagccttcccgggaacacacagactctgcctctgcgcatgtgtt
tcaaggaaaattttagtgaattttgacctttccttatccacttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_33671618_33672714
seq2: B6Ng01-067H02.b_41_1124

seq1  GAATTCATCAATCCTGACTACTAGTTATTTGTCAAAATGCTACATTAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAATCCTGACTACTAGTTATTTGTCAAAATGCTACATTAGGA  50

seq1  AATAAAATGTTTCTGCATATCTAGGTTTCCTAAAATAAATGTAACCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGTTTCTGCATATCTAGGTTTCCTAAAATAAATGTAACCTCTG  100

seq1  AGGGTATGCAAGCATTCTAGGATTCATACTAGTTAGATGCTTGGGCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATGCAAGCATTCTAGGATTCATACTAGTTAGATGCTTGGGCCCCT  150

seq1  GGGCTTACAAATAAGCAAATATCCTTCCTTGGTTTTGGAAAACTGTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTACAAATAAGCAAATATCCTTCCTTGGTTTTGGAAAACTGTTGGA  200

seq1  TTATTTCAGATCACACACATACACCCATCTTTGGGGCCTTAAGGGCATTA  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTATTTCAGATCACACACATACACCCATCTTTGGGGCCTTGAGGGCATTA  250

seq1  ACATTAATGGAAGTGATGCAAAATTCAATTAGAAATTATCTGATGCTCCC  300
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACATTAATGGAAGTGATGCAAAATTCAATTAAAAATTATCTGATGCTCCC  300

seq1  TGCATGTCGATTTCACTCTACAAGGAGCCTCTTCTGCAGAATCTGCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTCGATTTCACTCTACAAGGAGCCTCTTCTGCAGAATCTGCCTGA  350

seq1  ACAGATGAGACTCGGCACAGGCAGGGAGAAAGCTGTCAGAGGAGAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGAGACTCGGCACAGGCAGGGAGAAAGCTGTCAGAGGAGAAATTT  400

seq1  CAAATAAGGGCAGAAAAATGATCCCAACATGGGAGCCCTCTTCACAGCAT  450
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAATAAGGGCAGAAAAATGATCCCAACATGGGAGCCCTCTTCACAACAT  450

seq1  TACCCTTAGCAGAAGTAGAGCCTAGGGCAAGTCACATTATAATAGACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTAGCAGAAGTAGAGCCTAGGGCAAGTCACATTATAATAGACCTA  500

seq1  AAATATTTTAAATGAATGCCAAGGAAGACTGCTACTTTAGATTAAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTAAATGAATGCCAAGGAAGACTGCTACTTTAGATTAAATGTT  550

seq1  CCTAGGACTAGAGTAAATAACCATAATTGAACATGCAGAGAGACTATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGACTAGAGTAAATAACCATAATTGAACATGCAGAGAGACTATAGT  600

seq1  GATATCAAAGTCTGATTGCATTGTGTGGACTATACAGGACAAAATAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAAAGTCTGATTGCATTGTGTGGACTATACAGGACAAAATAAGGT  650

seq1  TCTGGAGACCTATTTCCTGGCTTAAAGGGCATGACACTAATGGATTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGACCTATTTCCTGGCTTAAAGGGCATGACACTAATGGATTCTAC  700

seq1  CCTAGTCACAAGCCTGAGGCATGGGAGAGAATCATGCCAGAGTGGAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCACAAGCCTGAGGCATGGGAGAGAATCATGCCAGAGTGGAAAGA  750

seq1  CTCAAATATCAAGACAGACCAGGGTTTAAATTCAAGCTGTGTCCTTCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATATCAAGACAGACCAGGGTTTAAATTCAAGCTGTGTCCTTCAAT  800

seq1  TCCCTAGTGGCTTTCAGCAAACTACTGTACTTCATCTTTAAAATGAGAAT  850
      |||||| ||||||||||| |||||||||||||||||| ||||||||||||
seq2  TCCCTACTGGCTTTCAGC-AACTACTGTACTTCATCTATAAAATGAGAAT  849

seq1  AATGTGATTGGGCCTTGTGGTACATGTCTGTAATCCCAACACTTAGAAGA  900
      |||||||||||||||||||| |||||||||||||||| ||||||| ||||
seq2  AATGTGATTGGGCCTTGTGGGACATGTCTGTAATCCC-ACACTTACAAGA  898

seq1  CTAAAACAGGAGTAATGTAAGAGTACATACAAATAAACACAAAAACACAT  950
      |||||||||||||||||||||||| | | ||||| ||| |||||   | |
seq2  CTAAAACAGGAGTAATGTAAGAGT-CCTGCAAAT-AACGCAAAA--CCCT  944

seq1  ACATAGAAAAGTGATATCAGTCTCATAGAGGTTCTAGGAAGACTAGAAGT  1000
       | | ||||| |||||||| ||||||||||| |||||||||||| ||| |
seq2  TCTTGGAAAATTGATATCATTCTCATAGAGG-TCTAGGAAGACT-GAAAT  992

seq1  GAAGCTCATATTCATTCTGATGGTACTTGATATCATAGCATTCAGCAAAG  1050
      ||| ||||| |||| ||||||||||| || |||| |||||| | ||||||
seq2  GAAACTCAT-TTCA-TCTGATGGTACGTGGTATC-TAGCATAC-GCAAAG  1038

seq1  TATTTTTATTTATTTACTTATTTAATGTATATGGCTGTTTTACCTAC  1097
      |||||| |||||||||||||||||| | |||||||||||||||||||
seq2  TATTTTAATTTATTTACTTATTTAA-GGATATGGCTGTTTTACCTAC  1084

seq1: chr6_33813405_33814200
seq2: B6Ng01-067H02.g_66_860 (reverse)

seq1  AGAAGTGGAAAAGGAATGGATAAAAATCACTAAATTGTTCCTTGAAACAC  50
      ||||||||| |||||| ||  |||| |||||||| | |||||||||||||
seq2  AGAAGTGGATAAGGAAAGGTCAAAATTCACTAAAATTTTCCTTGAAACAC  50

seq1  AGGCGCAGAGGCAGAGTCTGTGAGATCCCGGGAAGGCTCATTGCTTGTGC  100
      | |||||||||||||||||||| | |||||||||||||||||||||||||
seq2  ATGCGCAGAGGCAGAGTCTGTGTGTTCCCGGGAAGGCTCATTGCTTGTGC  100

seq1  CCTCTAGTGCTGGGCACTTTCCCCTCTCCACAGCTGATGCAGAGCAGAAG  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAG-GCTGGGCACTTTCCCCTCTCCACAGCTGATGCAGAGCAGAAG  149

seq1  AGGGTGCGGACAAAGAGTGTGGTTGGCAATTCTGTCAAAGAGTCACTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCGGACAAAGAGTGTGGTTGGCAATTCTGTCAAAGAGTCACTTAC  199

seq1  ACTTTATGTAAAATATTTTTATCTAACTATAAAATTACACATGTTAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGTAAAATATTTTTATCTAACTATAAAATTACACATGTTAATTC  249

seq1  TCAGAAGTCTGCACAAATAGAAACTGTACCGGTTTGGGGTAGTTTGGGCA  300
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCAGAAGTCTGCACAAATAGAAACTGTCCCGGTTTGGGGTAGTTTGGGCA  299

seq1  TGGTATTACATTTGAGCAGTCTGCATCAAGAGCTGTCTGTGAAAGGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTACATTTGAGCAGTCTGCATCAAGAGCTGTCTGTGAAAGGCTAC  349

seq1  TCCAGCTCTACAATTTCATAATCACAGTTCTGTCTCAAGCAGCCACTGGA  400
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTATACAATTTCATAATCACAGTTCTGTCTCAAGCAGCCACTGGA  399

seq1  ATCAACCTTTTCTCTCCTAGACCCACTCTGTCCTTCCTCTCTCTAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCTTTTCTCTCCTAGACCCACTCTGTCCTTCCTCTCTCTAAAAAT  449

seq1  TCAGAGCTAATTTTCTCTTTAATAACTGCAAACTGCTCTGAATAGGGACC  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCAGAGCTAATTTTCTCTTTAATAAATGCAAACTGCTCTGAATAGGGACC  499

seq1  AGGTGCCGCTTTTCCTGGTTTCTTTTGGCTCCTGTGAATACAGGTATATT  550
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCGCTTTTCCTGGTTTCTTTTGGCTCCTGTGAATACAGGTATATT  549

seq1  TCTCAGTGATGTTTAGAAGGGATCTGTTTGTTTTGTGGCAGAGCTATAGC  600
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  TCTCAGTGATGTTTAGAAGGGATCTTTTTGTTTTGTGGCAGAGCTATAGT  599

seq1  TGGATCTATAGCTATAAATATATACACATATATATTTATATATACATACA  650
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTATAGCTATAAATATATACACATATATATTTATATATACATACA  649

seq1  TATTATATGTGTAATATCTAACATTTTATATACATTTTTTAAATTTCGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATGTGTAATATCTAACATTTTATATACATTTTTTAAATTTCGAG  699

seq1  TGGTACAGCATATTGGACTTATAGTCTGTCCATTCTCAGTGGGTTTCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAGCATATTGGACTTATAGTCTGTCCATTCTCAGTGGGTTTCATG  749

seq1  AGACAAAACAATTTGTAACCTCTAAAGCTAGTCACTGCATGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAACAATTTGTAACCTCTAAAGCTAGTCACTGCATGAATTC  795