BAC Information

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BAC

Clone NameB6Ng01-067I03
Chromosome1 (Build37)6 (Build37)
Map Location 64,335,887 - 64,336,86734,073,227 - 34,073,293
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1
Downstream geneLOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067I03.bB6Ng01-067I03.g
ACCDH886373DH886374
length971436
definitionDH886373|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I03, 5' end.DH886374|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,335,887 - 64,336,867)(34,073,227 - 34,073,293)
sequence
gaattccactgtggatcaaatcagtctgaatgctccagccactgtatcag
ccccatctgccctgtcatttaagaagtgaaacttaggacctgtgctgtgt
gctgtcagcggacatgtgccgcgctatctagggagagggtagttggatgt
actcactgttctgaaaagttctgagaacacggtgggtcagcacatccaac
aagaaagttttattgttctatctatctatctatctatctatctatctatc
tatctatctatctatctatcgcttttgtcctaaatagttgatttttcccc
cccaaatgggagggctttgacaagaaaagaaaaaaaaaaaagaaaagaaa
agtgctacggtctgcactgagaatattttggggttcctgaagaagaatga
gggtttttccaggggcctaaggctttgctctcttcacccctaactctctg
agaactcagatccttctttctttgggaggcttgggttgtggagcaggcaa
ttggccaggccgtgggtagttcacaaatttgttcgtttgaaccaggagca
tagacatccccagtactatgtaaagcttccttcaaccccagcctatcttc
cagaacagaagctcatttctatccaacaggcttccctgagaacagccgct
gtccactgaggcagctgactactaagtcatgttttaatatcactaattcg
tttgtctgcgctcttggtctggctttctctatcttcatagaaacgaggga
gggaaaggaaacagtcgatgctgatgcagccggggaggctggagactcaa
cgtagagttggcgaatagttatgtttgagcaacagagtcacaccttgtcc
tgcctgtctccccagcctgtcccccaccccaccggcagtgcctcttcaca
attcccagcttgacagcttgctacctgcctggtctggcggttagctccca
ctgctccctgggctttgtctg
agtgatgagatctgaaggctgtactaatctgtgggtatagacatgcaaaa
tcagatgaaaatttgatattacatccatttagcaaacaaccatagaagat
ttacccctgggatctatggacagatgtattgtacaagtgtgcttctcctc
ctcctgcagaagagtctttaaatccaatcagaaagaagttggttacccct
attatagtcatgccactactgtatccatgtgcatctattcccatgagggc
caaagcaactcttaaaaaagaatttaattgggagcttactcacagtttca
aaggtggtgcacattgtcatcatgacaatgaacttagagctggagcagta
gctactcctgctcccctacagagagagagagaaagagagagagagagaga
gagagagagagagagagagagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64335887_64336867
seq2: B6Ng01-067I03.b_43_1013 (reverse)

seq1  CAGACAGAGGCCCAGGGGAGCAGCTGGGAGCTGAGCCGCCAGAGCCAGGC  50
      |||||| | ||||| |||||||| |||||||| | |||||||| ||||||
seq2  CAGACA-AAGCCCA-GGGAGCAG-TGGGAGCT-AACCGCCAGA-CCAGGC  45

seq1  AGGTAGCAAGCTGTCAAGCTGGGGAATTGTGAAGAGGCACTGCCGGTGGG  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGTAGCAAGCTGTCAAGCT-GGGAATTGTGAAGAGGCACTGCCGGTGGG  94

seq1  GTGGGGGACAGGCTGGGGAGACAGGCAGGACAAGGTGTGACTCTGTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGACAGGCTGGGGAGACAGGCAGGACAAGGTGTGACTCTGTTGCT  144

seq1  CAAACATAACTATTCGCCAACTCTACGTTGAGTCTCCAGCCTCCCCGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATAACTATTCGCCAACTCTACGTTGAGTCTCCAGCCTCCCCGGCT  194

seq1  GCATCAGCATCGACTGTTTCCTTTCCCTCCCTCGTTTCTATGAAGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGCATCGACTGTTTCCTTTCCCTCCCTCGTTTCTATGAAGATAGA  244

seq1  GAAAGCCAGACCAAGAGCGCAGACAAACGAATTAGTGATATTAAAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAGACCAAGAGCGCAGACAAACGAATTAGTGATATTAAAACATG  294

seq1  ACTTAGTAGTCAGCTGCCTCAGTGGACAGCGGCTGTTCTCAGGGAAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAGTCAGCTGCCTCAGTGGACAGCGGCTGTTCTCAGGGAAGCCT  344

seq1  GTTGGATAGAAATGAGCTTCTGTTCTGGAAGATAGGCTGGGGTTGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATAGAAATGAGCTTCTGTTCTGGAAGATAGGCTGGGGTTGAAGGA  394

seq1  AGCTTTACATAGTACTGGGGATGTCTATGCTCCTGGTTCAAACGAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTACATAGTACTGGGGATGTCTATGCTCCTGGTTCAAACGAACAAA  444

seq1  TTTGTGAACTACCCACGGCCTGGCCAATTGCCTGCTCCACAACCCAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAACTACCCACGGCCTGGCCAATTGCCTGCTCCACAACCCAAGCC  494

seq1  TCCCAAAGAAAGAAGGATCTGAGTTCTCAGAGAGTTAGGGGTGAAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGAAAGAAGGATCTGAGTTCTCAGAGAGTTAGGGGTGAAGAGAG  544

seq1  CAAAGCCTTAGGCCCCTGGAAAAACCCTCATTCTTCTTCAGGAACCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTTAGGCCCCTGGAAAAACCCTCATTCTTCTTCAGGAACCCCAA  594

seq1  AATATTCTCAGTGCAGACCGTAGCACTTTTCTTTTCTTTTTTTTTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTCAGTGCAGACCGTAGCACTTTTCTTTTCTTTTTTTTTTTTCT  644

seq1  TTTCTTGTCAAAGCCCTCCCATTTGGGGGGGAAAAATCAACTATTTAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTCAAAGCCCTCCCATTTGGGGGGGAAAAATCAACTATTTAGGA  694

seq1  CAAAAGCGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  750
      |||||||    |||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGC----GATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  740

seq1  AGATAGATAGATAGAACAATAAAACTTTCTTGTTGGATGTGCTGACCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGAACAATAAAACTTTCTTGTTGGATGTGCTGACCCAC  790

seq1  CGTGTTCTCAGAACTTTTCAGAACAGTGAGTACATCCAACTACCCTCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCTCAGAACTTTTCAGAACAGTGAGTACATCCAACTACCCTCTCC  840

seq1  CTAGATAGCGCGGCACATGTCCGCTGACAGCACACAGCACAGGTCCTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGCGCGGCACATGTCCGCTGACAGCACACAGCACAGGTCCTAAG  890

seq1  TTTCACTTCTTAAATGACAGGGCAGATGGGGCTGATACAGTGGCTGGAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTCTTAAATGACAGGGCAGATGGGGCTGATACAGTGGCTGGAGC  940

seq1  ATTCAGACTGATTTGATCCACAGTGGAATTC  981
      |||||||||||||||||||||||||||||||
seq2  ATTCAGACTGATTTGATCCACAGTGGAATTC  971

seq1: chr6_34073227_34073293
seq2: B6Ng01-067I03.g_444_510 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTTTCTCTCTCTCTCT  67
      |||||||||||||||||
seq2  TCTTTCTCTCTCTCTCT  67