BAC Information

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BAC

Clone NameB6Ng01-067M07
Chromosome6 (Build37)
Map Location 54,350,708 - 54,351,850
singlet/doubletsinglet
Overlap genenone
Upstream geneCreb5, LOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926
Downstream geneWipf3, Scrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik, Znrf2, Nod1, A030007L17Rik, Gars, Crhr2, Inmt, C330043M08Rik, Aqp1, Ghrhr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067M07.bB6Ng01-067M07.g
ACCDH886552DH886553
length1,133219
definitionDH886552|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M07, 5' end.DH886553|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgtaggtatagacaaagtcaaataaaaagcaaaggtttct
agaatatgattccaaaatcactggagataacaatgatgatgcatctagaa
atgaaccttgctgtcttcctgaactttatggatgaaacagctgacccagc
cacctatacaatgttcctcctatgttagaaaaaccagagatacaggactg
gggacaagaggcagatatgtattaggtatatattgcctttgggtttggag
agaggaccacactcctaccccaactctcggtctctaacacgtcctttgac
attgcacatacacaaacagcagaagtggggatgcttcataaggaaacagg
acatccgtggaagcataaatgttcaggagttgtgaaacagccagggggac
tcctgactgcactgactgagttatgtctttgtgtgtttcatcagagaacc
aggcaggaaaggtcttcagtgtctcctggggagagaaaagcatatgtaaa
gtacacagctcagctggatcctagggtttcagcagggaatgcctgaaagt
gggtaaaagaaaatgaggtcttcagtataaagtcataagaagggcacagc
aagggaatgaagacagaatcagctctctgtggtccacattcacagactca
attaaacatgggctcaaagggtgtgtagggtgttagtatgcaacaatagc
aaacatgtacagactttttcatatatgtctctaaacagctgtctatgtca
cctgtccattgtgcttaatataagcaatctagagatgattttaaaagata
aaagtgaaggttctaatatatatgcaatactacacatatttatacaaaac
actgggagcgtctacagatttgaataccaatggcattccttgtgccactc
ctcccacagacaccaaagaaccacttaccacttcttatgagtcaggcagc
aggctccctttggctaagctgacatgaccagaaaggaaaagcacgagtct
ccatcccactccctgtctctctccatccatggaggaaggtatgctctctg
tccactgtacattcatagctaataggaggcttggctagaatcttgtggct
tccacttacatgcaatatgagaacctttattcc
taagatgatgggggaaaataggtagatggtaatggaatattatttgccaa
taaaaaaaggattaaatactgctgtgtgttacaaattggatctcgagaac
ttgataaaacctaagtgaaagacacagatacaaaagccatttgtgtgaat
caccgaagttatagaggcagaaagtagagggatgcttctgcggggttggg
atgggatagggaagtggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_54350708_54351850
seq2: B6Ng01-067M07.b_46_1178

seq1  GAATTCTCTCTGTAGGTATAGACAAAGTCAAATAAAAAGCAAAGGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAGGTATAGACAAAGTCAAATAAAAAGCAAAGGTTTCT  50

seq1  AGAATATGATTCCAAAATCACTGGAGATAACAATGATGATGCATCTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGATTCCAAAATCACTGGAGATAACAATGATGATGCATCTAGAA  100

seq1  ATGAACCTTGCTGTCTTCCTGAACTTTATGGATGAAACAGCTGACCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTTGCTGTCTTCCTGAACTTTATGGATGAAACAGCTGACCCAGC  150

seq1  CACCTATACAATGTTCCTCCTATGTTAGAAAAACCAGAGATACAGGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATACAATGTTCCTCCTATGTTAGAAAAACCAGAGATACAGGACTG  200

seq1  GGGACAAGAGGCAGATATGTATTAGGTATATATTGCCTTTGGGTTTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAGAGGCAGATATGTATTAGGTATATATTGCCTTTGGGTTTGGAG  250

seq1  AGAGGACCACACTCCTACCCCAACTCTCGGTCTCTAACACGTCCTTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCACACTCCTACCCCAACTCTCGGTCTCTAACACGTCCTTTGAC  300

seq1  ATTGCACATACACAAACAGCAGAAGTGGGGATGCTTCATAAGGAAACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACATACACAAACAGCAGAAGTGGGGATGCTTCATAAGGAAACAGG  350

seq1  ACATCCGTGGAAGCATAAATGTTCAGGAGTTGTGAAACAGCCAGGGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCGTGGAAGCATAAATGTTCAGGAGTTGTGAAACAGCCAGGGGGAC  400

seq1  TCCTGACTGCACTGACTGAGTTATGTCTTTGTGTGTTTCATCAGAGAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACTGCACTGACTGAGTTATGTCTTTGTGTGTTTCATCAGAGAACC  450

seq1  AGGCAGGAAAGGTCTTCAGTGTCTCCTGGGGAGAGAAAAGCATATGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAAAGGTCTTCAGTGTCTCCTGGGGAGAGAAAAGCATATGTAAA  500

seq1  GTACACAGCTCAGCTGGATCCTAGGGTTTCAGCAGGGAATGCCTGAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGCTCAGCTGGATCCTAGGGTTTCAGCAGGGAATGCCTGAAAGT  550

seq1  GGGTAAAAGAAAATGAGGTCTTCAGTATAAAGTCATAAGAAGGGCACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAAGAAAATGAGGTCTTCAGTATAAAGTCATAAGAAGGGCACAGC  600

seq1  AAGGGAATGAAGACAGAATCAGCTCTCTGTGGTCCACATTCACAGACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATGAAGACAGAATCAGCTCTCTGTGGTCCACATTCACAGACTCA  650

seq1  ATTAAACATGGGCTCAAAGGGTGTGTAGGGTGTTAGTATGCAACAATAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACATGGGCTCAAAGGGTGTGTAGGGTGTTAGTATGCAACAATAGC  700

seq1  AAACATGTACAGAC-TTTTCATATATGTCTCTAAACAGCTGTCTATGTCA  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAACATGTACAGACTTTTTCATATATGTCTCTAAACAGCTGTCTATGTCA  750

seq1  CCTGTCCATTGTGCTTAATATAAGCAATCTAGAGATGA-TTTAAAAGATA  798
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTGTCCATTGTGCTTAATATAAGCAATCTAGAGATGATTTTAAAAGATA  800

seq1  AAAGTGAAGGTTCTAATATATATGCAATACTACACATATTTATACAAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAGGTTCTAATATATATGCAATACTACACATATTTATACAAAAC  850

seq1  ACT-GGAGCGTCTACAGATTTGAATACCAATGGCATTCCTTGTGCCACTC  897
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAGCGTCTACAGATTTGAATACCAATGGCATTCCTTGTGCCACTC  900

seq1  CTCCCACAGACACCAAAGAACCACTTACCACTTCTTATGAGTCAGGCAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAGACACCAAAGAACCACTTACCACTTCTTATGAGTCAGGCAGC  950

seq1  AGGCTCCCTTTGGCTAAGCTGACATGACCAGAAAGGAAAAGCACAGAGTC  997
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGCTCCCTTTGGCTAAGCTGACATGACCAGAAAGGAAAAGCAC-GAGTC  999

seq1  TCCATCCCACTCCCTGTCTTCTCTCCATCCATGGAGAAAGGCTATGCTCT  1047
      |||||||||||||||||| ||||||||||||||||| |||| ||||||||
seq2  TCCATCCCACTCCCTGTC-TCTCTCCATCCATGGAGGAAGG-TATGCTCT  1047

seq1  CGGGCACACTGCACATTCATAGCTAGAGAGGAGGCTGGGCTAGACATCTT  1097
      | | | ||||| ||||||||||||| | |||||||| ||||||| |||||
seq2  CTGTC-CACTGTACATTCATAGCTA-ATAGGAGGCTTGGCTAGA-ATCTT  1094

seq1  TGTGCTTCCACCTTTTTACAATGCAAATATGAGAACATTTTATTCC  1143
         ||||||||    |||| |||| |||||||||||  ||||||||
seq2  GTGGCTTCCAC----TTAC-ATGC-AATATGAGAAC-CTTTATTCC  1133