BAC Information

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BAC

Clone NameB6Ng01-068D07
Chromosome6 (Build37)
Map Location 79,660,414 - 79,661,474
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384440, LOC621815
Downstream geneLOC100043392, Lrrtm4, LOC100043390
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D07.bB6Ng01-068D07.g
ACCDH886864DH886865
length1,0581,070
definitionDH886864|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D07, 5' end.DH886865|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactaagtcctagataagcaatggagtacttctccctagggaaa
actatttttcctattctcggcattacttagctctccgtaatctttgtgga
aggttgaggacttgtgtctttccccatccactttggcatgtccattgtaa
tccttattcaggttatttagttacgtacgtgagactttaagagtgttctg
acattaccaggtgacacaatcccatatccaatctcctgatcctctggctc
ttacatgtttccgtcttctcatttataatgttatccaagccataggtgca
ggagtggtttgtagatggatgcaatgcaactgtgctccacaactttgcac
tttgtatcccccttacaccctcaggagctatttcccatgttccataataa
atctatctttgatcacttctggtcttaggatcctaatttgtcctgggcat
gaaacaacaaacttgatactattagcttagggatagctttttcttttttc
tttttctttttttcttttaaatctggatttgtcttttatttctttcccct
gttatttcttttttttaattttttattttttattagatattttatttatt
tacatttcaagtggtatccccttccctggttttccctctaaaaaccccct
aacccttcctcgcttcccctgatcatcaacccaccctctcccatttcctg
gctctggcattctcctgtactgggtcatagaaccttcacaggaccaaggg
cctctcctcccattgatgatcaactaggccatcctttgctacatattcag
gtagagctctgagtcccaccatgtgttttctttggttggtgatttagttt
ccagggagctctgaggatactggatagttcatattgttgttcctcctatg
gggctgcaaacccctcagctccttggatcctttctctagctccttcattg
gaaaccatgtgctccgttcaatgatggctgtgagcatccacttctgtatt
tttcagcactggcagatcctcccagagatagcatttcagtcttctttcag
caagcact
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttggagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaagacttttccccac
tttctcctctataagtttcagtgtctctagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacctagtactacgggaggatccagcaatacctctcttggg
catatatccagaagatgccccaactggtaagaaggaaacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagatcccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaacttatgaaattcctagcca
aatgggatggacctggagggcatcatcctgagtgaggaaacacattcaca
aaggaactcacacaatatgtactcactgataagtgaatattagcccaaaa
cctaggatacccaagatataagatacaattttgctaaacacatgaaactc
aagaaaatgaagactgaagtgtggacactatgcccctccttaaaattggg
aacaaacacccatgaaggagttacagagacaaagttggaggtgagagaaa
ggaggaccatgtagagactgcctatccgggatcctccccatatcagcttc
caacgctgaaccatgcatacaccagcagatttatcgaaaggaccaaatgt
ccgtctctttggaacatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79660414_79661474
seq2: B6Ng01-068D07.b_51_1108 (reverse)

seq1  AGTGCTTGCTGAAAGAAGACTGAAATGGCTATCTCTTGGGAGGCTCTGCC  50
      |||||||||||||||||||||||||| |||||||| ||||||| ||||||
seq2  AGTGCTTGCTGAAAGAAGACTGAAAT-GCTATCTC-TGGGAGGATCTGCC  48

seq1  AGTGCCTGAAAAATACAGAAGTGGATGCTCACAGCCATCCATTGAACGGA  100
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGTG-CTGAAAAATACAGAAGTGGATGCTCACAGCCAT-CATTGAACGGA  96

seq1  GCACATGGTTTCCAATGAAGGAGCTAGAGAAAGGATCCAAGGAGCTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGTTTCCAATGAAGGAGCTAGAGAAAGGATCCAAGGAGCTGAGG  146

seq1  GGTTTGCAGCCCCATAGGAGGAACAACAATATGAACTATCCAGTATCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCAGCCCCATAGGAGGAACAACAATATGAACTATCCAGTATCCTC  196

seq1  AGAGCTCCCTGG-AACTAAATCACCAACCAAAGAAAACACATGGTGGGAC  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCCTGGAAACTAAATCACCAACCAAAGAAAACACATGGTGGGAC  246

seq1  TCAGAGCTCTACCTGAATATGTAGCAAAGGATGGCCTAGTTGATCATCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTCTACCTGAATATGTAGCAAAGGATGGCCTAGTTGATCATCAA  296

seq1  TGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATGACCCAGTACAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATGACCCAGTACAGGA  346

seq1  GAATGCCAGAGCCAGGAAATGGGAGAGGGTGGGTTGATGATCAGGGGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCAGAGCCAGGAAATGGGAGAGGGTGGGTTGATGATCAGGGGAAG  396

seq1  CGAGGAAGGGTTAGGGGGTTTTTAGAGGGAAAACCAGGGAAGGGGATACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAAGGGTTAGGGGGTTTTTAGAGGGAAAACCAGGGAAGGGGATACC  446

seq1  ACTTGAAATGTAAATAAATAAAATATCTAATAAAAAATAAAAAATTAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATGTAAATAAATAAAATATCTAATAAAAAATAAAAAATTAAAA  496

seq1  AAAAGAAATAACAGGGGAAAGAAATAAAAGACAAATCCAGATTTAAAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATAACAGGGGAAAGAAATAAAAGACAAATCCAGATTTAAAAGA  546

seq1  AAAAAAGAAAAAGAAAAAAGAAAAAGCTATCCCTAAGCTAATAGTATCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAAGAAAAAAGAAAAAGCTATCCCTAAGCTAATAGTATCAA  596

seq1  GTTTGTTGTTTCATGCCCAGGACAAATTAGGATCCTAAGACCAGAAGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGTTTCATGCCCAGGACAAATTAGGATCCTAAGACCAGAAGTGA  646

seq1  TCAAAGATAGATTTATTATGGAACATGGGAAATAGCTCCTGAGGGTGTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGATAGATTTATTATGGAACATGGGAAATAGCTCCTGAGGGTGTAA  696

seq1  GGGGGATACAAAGTGCAAAGTTGTGGAGCACAGTTGCATTGCATCCATCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATACAAAGTGCAAAGTTGTGGAGCACAGTTGCATTGCATCCATCT  746

seq1  ACAAACCACTCCTGCACCTATGGCTTGGATAACATTATAAATGAGAAGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCACTCCTGCACCTATGGCTTGGATAACATTATAAATGAGAAGAC  796

seq1  GGAAACATGTAAGAGCCAGAGGATCAGGAGATTGGATATGGGATTGTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATGTAAGAGCCAGAGGATCAGGAGATTGGATATGGGATTGTGTC  846

seq1  ACCTGGTAATGTCAGAACACTCTTAAAGTCTCACGTACGTAACTAAATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTAATGTCAGAACACTCTTAAAGTCTCACGTACGTAACTAAATAA  896

seq1  CCTGAATAAGGATTACAATGGACATGCCAAAGTGGATGGGGAAAGACACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATAAGGATTACAATGGACATGCCAAAGTGGATGGGGAAAGACACA  946

seq1  AGTCCTCAACCTTCCACAAAGATTACGGAGAGCTAAGTAATGCCGAGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCAACCTTCCACAAAGATTACGGAGAGCTAAGTAATGCCGAGAAT  996

seq1  AGGAAAAATAGTTTTCCCTAGGGAGAAGTACTCCATTGCTTATCTAGGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAATAGTTTTCCCTAGGGAGAAGTACTCCATTGCTTATCTAGGAC  1046

seq1  TTAGTGGAATTC  1061
      ||||||||||||
seq2  TTAGTGGAATTC  1058