BAC Information

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BAC

Clone NameB6Ng01-068E20
Chromosome6 (Build37)
Map Location 24,655,863 - 24,656,560
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps2, Tas2r118, LOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl
Downstream gene4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358, Gpr37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068E20.bB6Ng01-068E20.g
ACCDH886928DH886929
length1,228698
definitionDH886928|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E20, 5' end.DH886929|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatattaacagcaatatacagcagacca
gtagccaacatcaaaataaatggagagaagtagaagaaatctcactaaaa
tcagggactagacaaggatgcccactttcttcctacctattccatatagt
actcaatgtcctagccagagcaattagacaacaaaaggaggtcaagggga
tataaattgaaaaggaagaagtcaaaatatcactatttgcagaagatatg
atagcatatataagcgatcctaaaaattctaccagagaactcctaaacct
gataaacagcttcagtgaagtagctggatataaaattaactcaaacaaat
cagtggtcattctctacacaaagggtaaacaggctgagaaagaaattagg
gaaataacacccttctcaataatcacaaataatataaaataccttggcgt
gactctatctaaggaagtgaaagatctgtatgataagaacttcaagtctc
tgaagaaagaaattgaagaagatctcagaagatgcacagatctcccatgc
tcatggattggcaggattaatatagtgaaaatggctttcttgccaaaagc
aatctacagattcaatgcaattcccatcaaaattacaactcagttcttca
ttgagttagaatgggcaatttgcaaattcatctggaataacaaaaaacct
aggatagcaaaaactattctcagcaataaaagaacctctagtagaaccac
catgcctgacattaaggtgtactacagagcaattgtgacaaaaaaaaaaa
aaaaaaaaaaaaaaaccaacaaccaaacaaaaaaactgcatgttactggt
acagagacagacaggtagatcaatagattagaattgaagacccagaaatg
aacccacacacctatggtcacttgatctttgacagggagtttaaaccata
tattggaaaaaaggaagcattttcaacaaatggtgctggcaatttggtgg
ttatcatgtagaagaataaaatgattcattcttatctcttgctcaagtct
agtgatagggactccattaaacaagaaccctgaacttataagagatttgg
gaaatcctcaagaattgcactggggaattcgacgaacacatgcctgggct
agactgattcacaaatgacttatatggaagctgtaggcaagactttatga
catgccagcatgggagaattaccatcta
gaattctttgccatctggaccctcaggtacgagaatgtggacatcagaaa
aggcttgcctttgggtcttctgggtggtgtaaaagaaagattctgtttga
attgcagtgagactgacgaaatcaccagcttcaagttctatcagcagcca
atttggaatctcatcagggatgggccaaacctgtacaagcctctggcggt
ctatttctgggttccactaaggacaggcatgcaggcttagataagcaagg
ataacatgcctggaaggaagatgtggctctcggtaggctaatcagaggat
actgaagggctatgacttaccagtacctgtgcctgaagggaaatgacttc
acaaacaagacaactggagcgttttatggaacacagccacaggctgaagg
tatataaggaggctgaagttcctggctaaccaggtggacactccaagcat
ctaaaatccagccacatggtgaggagcctgtgtcagtccctgagtctgaa
ttactgtgactactaagtatttgggattaaacaagcttaaggggaagaaa
gcttgcctcacagttcatatggtttcgggccatagtcactgagatccact
gatttgggaaatgaggtaaaagagaaccatagtggggacacttgatggag
cagagctgggttagctaatggtggataaggcgtggggggggggtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24655863_24656560
seq2: B6Ng01-068E20.g_68_765

seq1  GAATTCTTTGCCATCTGGACCCTCAGGTACGAGAATGTGGACATCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCCATCTGGACCCTCAGGTACGAGAATGTGGACATCAGAAA  50

seq1  AGGCTTGCCTTTGGGTCTTCTGGGTGGTGTAAAAGAAAGATTCTGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCCTTTGGGTCTTCTGGGTGGTGTAAAAGAAAGATTCTGTTTGA  100

seq1  ATTGCAGTGAGACTGACGAAATCACCAGCTTCAAGTTCTATCAGCAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGTGAGACTGACGAAATCACCAGCTTCAAGTTCTATCAGCAGCCA  150

seq1  ATTTGGAATCTCATCAGGGATGGGCCAAACCTGTACAAGCCTCTGGCGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAATCTCATCAGGGATGGGCCAAACCTGTACAAGCCTCTGGCGGT  200

seq1  CTATTTCTGGGTTCCACTAAGGACAGGCATGCAGGCTTAGATAAGCAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTGGGTTCCACTAAGGACAGGCATGCAGGCTTAGATAAGCAAGG  250

seq1  ATAACATGCCTGGAAGGAAGATGTGGCTCTCGGTAGGCTAATCAGAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATGCCTGGAAGGAAGATGTGGCTCTCGGTAGGCTAATCAGAGGAT  300

seq1  ACTGAAGGGCTATGACTTACCAGTACCTGTGCCTGAAGGGAAATGACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGGCTATGACTTACCAGTACCTGTGCCTGAAGGGAAATGACTTC  350

seq1  ACAAACAAGACAACTGGAGCGTTTTATGGAACACAGCCACAGGCTGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGACAACTGGAGCGTTTTATGGAACACAGCCACAGGCTGAAGG  400

seq1  TATATAAGGAGGCTGAAGTTCCTGGCTAACCAGGTGGACACTCCAAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGGAGGCTGAAGTTCCTGGCTAACCAGGTGGACACTCCAAGCAT  450

seq1  CTAAAATCCAGCCACATGGTGAGGAGCCTGTGTCAGTCCCTGAGTCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCCAGCCACATGGTGAGGAGCCTGTGTCAGTCCCTGAGTCTGAA  500

seq1  TTACTGTGACTACTAAGTATTTGGGATTAAACAAGCTTAAGGGGAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGACTACTAAGTATTTGGGATTAAACAAGCTTAAGGGGAAGAAA  550

seq1  GCTTGCCTCACAGTTCATATGGTTTCGGGCCATAGTCACTGAGATCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTCACAGTTCATATGGTTTCGGGCCATAGTCACTGAGATCCACT  600

seq1  GATTTGGGAAATGAGGTAAAAGAGAACCATAGTGGGGACACTTGATGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGAAATGAGGTAAAAGAGAACCATAGTGGGGACACTTGATGGAG  650

seq1  CAGAGCTGGGTTAGCTAATGGTGGATAAGGCGTGGGGGGGGGGTGGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGGGTTAGCTAATGGTGGATAAGGCGTGGGGGGGGGGTGGCT  698