BAC Information

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BAC

Clone NameB6Ng01-068G24
Chromosome6 (Build37)
Map Location 73,440,504 - 73,570,501
singlet/doubletdoublet
Overlap geneLOC100043338
Upstream geneSh2d6, Capg, Rbed1, Retsat, Tgoln1, LOC100038890, Tcf3, Kcmf1, Tmsb10, Dnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068G24.bB6Ng01-068G24.g
ACCDH887025DH887026
length1,1001,059
definitionDH887025|Mus musculus domesticus DNA, BAC clone: B6Ng01-068G24, 5' end.DH887026|Mus musculus domesticus DNA, BAC clone: B6Ng01-068G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,440,504 - 73,441,609)(73,569,865 - 73,570,501)
sequence
gaattctcttctcatttcagggtctgggaactgactcaagacccctgcta
ggaataacaggaggactgtgttagtcaggacaggatgcttcacttcttag
taacaaatcttacccaggccttacaggagtattgcacttaaggctttttc
ctgccacatgatctatttttctagctttggcatttgttccagagcttctt
gatggttgaacacctgctgctgagtttccagcattagtcatcaaatgctc
actatttattggtcagagctggtgcacccagcttccgaagaaccagagat
gagctagaatactactttgtgctctgaatacagagattttggaatatttc
atggacagctttaagaatctgaagttactgcagaatctggagaaaggagt
cagctactacagaggaagagatgatcctctgctcagcagcaggaaaaaat
gttgagagcaaacaaatgaacatagaaagggtcaaagcgcaaatactcag
attcaaatctcaacttggcagcctacccaacaggtctgaattagtttctt
tattaagacgacgtttctttaagccttgttgatacttttcttatacatgt
gtgtatgtgtgtgtgcatgtatgtttgagtaaagtatatgtgcaatatgt
gcaaatgggtgtgtagacgaatggacaaactcaagtgttgtatgggatcc
gccttgcttttttgagacaggatctatcactagcctggagctttctgggt
tggctaggctagctagccagtgagccccaaggttctgctttcccctgcat
ccccagtgcggagagtgctagcatcacaaaggcatgccactttccttggc
atttctatacgggttctggggcagaattcatgcccccatctttacaggca
agcactttatcaaaggtactctctccccagctctcatgactacttctgac
caccaaattgtaagcattcaatgctcagtttcatgagtgtgttctgaaaa
tgcctcaaatgtacgtgataataagaactagggatttgaattaagcatgt
gtgatcacctagaatcccagtacctcagagcaagacctgtacctcttata

gaattccaaagcataagcaaaatttgtaaatataggtgactgggttaggt
tgaactaaatgtcatccttttaacaaagaaaatgagagtgaaaaaaaatg
aagaatttaagatcaactgaagtggaaaaaaatgtttgcaaactacacag
ggtattgtcttattaaactccaaaatatgtaaaaagcctaactaaagaac
aagaaagtaattcaatttatcaaaaaaatgggcaaagactctaaaatgat
agttctcataggacactgaaatggctagcctctacattccccacccccaa
gagctgctaaacagcactgaaaaaatatgaaggaaatgaaaaccagaacc
acaatgagctttaggatagatttttatcaacccagaaagtattgagtggg
ctgtagaggatagaggcacctcaagtggtagtgataaaataaattacccc
aggtatggttgaaaagggtataaacgttccttaaaaacctaaaaataaaa
ctactgggctgaagagatggctcaggggaaaggtgcttttctctgaagcc
tggaaacttgattcaattcctggagccccaagacagatagagagagccca
cagtaggctgaaatctcaactctgtgtataaagccaaaggaatgagaaca
atctgataaaaagattatcagacaccaatggtcacagaacagtaaccaag
gtagacagttatcctaggaatccatggatggatggatggatggagggctg
gagggctggagggctgggagggctggatgcatggatgcatggatgcatgg
atggaagtattcttgtgctatgtatagatagaaaaaagtaccagttcacc
ttttatacttgtttgcacatactttatttgttgaataaatgaatatttta
atgtgtatatagccacaaaaagtaaaactagatgaaagcaaagtattggg
ttctacatgtaaagctgcttacagatgcagagctcagatgaaactggaac
ctgaattagctcttcaactgaagaacggctggtcattccccatgtttcct
ttgatggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_73440504_73441609
seq2: B6Ng01-068G24.b_46_1145

seq1  GAATTCTCTTCTCATTTCAGGGTCTGGGAACTGACTCAAGACCCCTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTCATTTCAGGGTCTGGGAACTGACTCAAGACCCCTGCTA  50

seq1  GGAATAACAGGAGGACTGTGTTAGTCAGGACAGGATGCTTCACTTCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAACAGGAGGACTGTGTTAGTCAGGACAGGATGCTTCACTTCTTAG  100

seq1  TAACAAATCTTACCCAGGCCTTACAGGAGTATTGCACTTAAGGCTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATCTTACCCAGGCCTTACAGGAGTATTGCACTTAAGGCTTTTTC  150

seq1  CTGCCACATGATCTATTTTTCTAGCTTTGGCATTTGTTCCAGAGCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACATGATCTATTTTTCTAGCTTTGGCATTTGTTCCAGAGCTTCTT  200

seq1  GATGGTTGAACACCTGCTGCTGAGTTTCCAGCATTAGTCATCAAATGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGAACACCTGCTGCTGAGTTTCCAGCATTAGTCATCAAATGCTC  250

seq1  ACTATTTATTGGTCAGAGCTGGTGCACCCAGCTTCCGAAGAACCAGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTATTGGTCAGAGCTGGTGCACCCAGCTTCCGAAGAACCAGAGAT  300

seq1  GAGCTAGAATACTACTTTGTGCTCTGAATACAGAGATTTTGGAATATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGAATACTACTTTGTGCTCTGAATACAGAGATTTTGGAATATTTC  350

seq1  ATGGACAGCTTTAAGAATCTGAAGTTACTGCAGAATCTGGAGAAAGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGCTTTAAGAATCTGAAGTTACTGCAGAATCTGGAGAAAGGAGT  400

seq1  CAGCTACTACAGAGGAAGAGATGATCCTCTGCTCAGCAGCAGGAAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACTACAGAGGAAGAGATGATCCTCTGCTCAGCAGCAGGAAAAAAT  450

seq1  GTTGAGAGCAAACAAATGAACATAGAAAGGGTCAAAGCGCAAATACTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGCAAACAAATGAACATAGAAAGGGTCAAAGCGCAAATACTCAG  500

seq1  ATTCAAATCTCAACTTGGCAGCCTACCCAACAGGTCTGAATTAGTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCTCAACTTGGCAGCCTACCCAACAGGTCTGAATTAGTTTCTT  550

seq1  TATTAAGACGACGTTTCTTTAAGCCTTGTTGATACTTTTCTTATACATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGACGACGTTTCTTTAAGCCTTGTTGATACTTTTCTTATACATGT  600

seq1  GTGTATGTGTGTGTGCATGTATGTTTGAGTAAAGTATATGTGCAATATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTGTGTGTGCATGTATGTTTGAGTAAAGTATATGTGCAATATGT  650

seq1  GCAAATGGGTGTGTAGACGAATGGACAAACTCAAGTGTTGTATGGGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGGTGTGTAGACGAATGGACAAACTCAAGTGTTGTATGGGATCC  700

seq1  GCCTTGCTTTTTTGAGACAGGATCTATCACTAGCCTGGAGCTTTCTGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTTTTTTGAGACAGGATCTATCACTAGCCTGGAGCTTTCTGGGT  750

seq1  TGGCTAGGCTAGCTAGCCAGTGAGCCCCAAGGTTCTGCTTTCCCCTGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGGCTAGCTAGCCAGTGAGCCCCAAGGTTCTGCTTTCCCCTGCAT  800

seq1  CCCCAGTGCGGAGAGTGCTAGCATCACAAAGGCATGCCACTTTCCTTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGCGGAGAGTGCTAGCATCACAAAGGCATGCCACTTTCCTTGGC  850

seq1  ATTTCTATACGGGTTCTGGGGCAGAATTCAGGCCCCCATCTTTACAGGGC  900
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  ATTTCTATACGGGTTCTGGGGCAGAATTCATGCCCCCATCTTTACA-GGC  899

seq1  AAGCACTTTATCAAAGGTACTCTCTCCCCAGCTCTCATGACTACTTCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTTATCAAAGGTACTCTCTCCCCAGCTCTCATGACTACTTCTGA  949

seq1  CCACCAAATTGTAAGCATTCAATGCTCAGTTTCATGAGTGTGTTCTGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAATTGTAAGCATTCAATGCTCAGTTTCATGAGTGTGTTCTGAAA  999

seq1  ATG-CTCAAATGTTACGTGATAATAAGAACTAGGGATATGAATTAGGCAT  1049
      ||| |||||||| |||||||||||||||||||||||| ||||||| ||||
seq2  ATGCCTCAAATG-TACGTGATAATAAGAACTAGGGATTTGAATTAAGCAT  1048

seq1  GGTGGTGATCACCTAGAATCCCAGTA-CTCAGGAGGCAAAGACCTGTAAC  1098
      |   |||||||||||||||||||||| |||| |||   |||||||||| |
seq2  G--TGTGATCACCTAGAATCCCAGTACCTCA-GAG--CAAGACCTGTACC  1093

seq1  TCTATATA  1106
      ||| ||||
seq2  TCT-TATA  1100

seq1: chr6_73569865_73570501
seq2: B6Ng01-068G24.g_502_1126 (reverse)

seq1  AGCCATCAAAGAAAACATGGGGGGATGTACAGCCTGTTCTTACAGTTGAG  50
      ||||||||||| |||||| |||| |||  ||||| |||||| ||||||| 
seq2  AGCCATCAAAGGAAACAT-GGGGAATGACCAGCC-GTTCTT-CAGTTGAA  47

seq1  GAAGCTGAACTCAGGTTCAGGTTTTCATCTGAGCTCTCGCATCTGGTAAG  100
      | |||| || ||||||||  | ||||||||||||||| |||||| |||||
seq2  G-AGCT-AATTCAGGTTCCAG-TTTCATCTGAGCTCT-GCATCT-GTAAG  92

seq1  CAGCTTTACATGTTAGAACCCAAATACTTTGCTTTCAATCTAGTTTTCAC  150
      |||||||||||| |||||||| |||||||||||||| |||||||||| ||
seq2  CAGCTTTACATG-TAGAACCC-AATACTTTGCTTTC-ATCTAGTTTT-AC  138

seq1  TTTTTGTGGCTATATACACATTAAAATATTCATTTATTCAACAAATAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGGCTATATACACATTAAAATATTCATTTATTCAACAAATAAAG  188

seq1  TTATGTGCAAAC-AGTATAAAAGGTTGAACTGGTACTTTTTTCTATCTAT  249
       ||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  -TATGTGCAAACAAGTATAAAAGG-TGAACTGGTACTTTTTTCTATCTAT  236

seq1  ACATAGCACAAGAATACTTCCATCCATGCATCCATGCATCCATGCATCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCACAAGAATACTTCCATCCATGCATCCATGCATCCATGCATCCA  286

seq1  GCCCT-CCAGCCCTCCAGCCCTCCAGCCCTCCATCCATCCATCCATCCAT  348
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCCAGCCCTCCAGCCCTCCAGCCCTCCATCCATCCATCCATCCAT  336

seq1  GGATTCCTAGGATAACTGTCTACCTTGGTTACTGTTCTGTGACCATTGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCTAGGATAACTGTCTACCTTGGTTACTGTTCTGTGACCATTGGT  386

seq1  GTCTGATAATCTTTTTATCAGATTGTTCTCATTCCTTTGGCTTTATACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATAATCTTTTTATCAGATTGTTCTCATTCCTTTGGCTTTATACAC  436

seq1  AGAGTTGAGATTTCAGCCTACTGTGGGCTCTCTCTATCTGTCTTGGGGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGAGATTTCAGCCTACTGTGGGCTCTCTCTATCTGTCTTGGGGCT  486

seq1  CCAGGAATTGAATCAAGTTTCCAGGCTTCAGAGAAAAGCACCTTTCCCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATTGAATCAAGTTTCCAGGCTTCAGAGAAAAGCACCTTTCCCCT  536

seq1  GAGCCATCTCTTCAGCCCAGTAGTTTTATTTTTAGGTTTTTAAGGAACGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCTTCAGCCCAGTAGTTTTATTTTTAGGTTTTTAAGGAACGT  586

seq1  TTATACCCTTTTCAACCATACCTGGGGTAATTTATTTTA  637
      |||||||||||||||||||||||||||||||||||||||
seq2  TTATACCCTTTTCAACCATACCTGGGGTAATTTATTTTA  625