BAC Information

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BAC

Clone NameB6Ng01-068I13
Chromosome6 (Build37)
Map Location 86,819,383 - 86,941,615
singlet/doubletdoublet
Overlap geneAak1
Upstream geneLOC665177, 1700019G17Rik, Cml1, Tprkb, EG434057, LOC665213, Dusp11, Figla, Add2, Tgfa, LOC665233, LOC100043094, LOC100043527, 2010309E21Rik, Snrpg, Pcyox1, Tia1, C87436, 2310040G24Rik, Pcbp1, Asprv1, Mxd1, 2610209M04Rik, Gmcl1, Anxa4, 2610306M01Rik
Downstream geneLOC100043555, Nfu1, Gfpt1, D6Ertd527e, Antxr1, Gkn1, Gkn2, 1190003M12Rik, Bmp10, Arhgap25, Prokr1, 2010301N04Rik, 1810020O05Rik, AB041550, LOC100043118, EG545864, Gp9, Rab43, Isy1, Cnbp, Copg, 8430410A17Rik, LOC665416, H1fx, EG434064, LOC100043131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068I13.bB6Ng01-068I13.g
ACCDH887093DH887094
length1,0151,067
definitionDH887093|Mus musculus domesticus DNA, BAC clone: B6Ng01-068I13, 5' end.DH887094|Mus musculus domesticus DNA, BAC clone: B6Ng01-068I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,819,383 - 86,820,400)(86,940,541 - 86,941,615)
sequence
gaattcaaaagtcaacttaagagactggattctctgctgcctttctgtag
gtcgttgggcttgaactctggtcttggaagcaagatgcttggcaaggagt
gtcttaatgactgggccaggaaatttgtttgtttgtttgtttaaaggctt
tgggcatttgttttcttacttccttacactaactttctgaatgttaaatt
cctggctccaaagatgggcacgttttagttttcaattcaagctacaagcc
tttctccaggaaggttggtctgtaaggacgtctgtcttgtctgccatggt
tagaagattggatggatttccttccttttcccttccatacttatttttct
tttcatttgtttcttgtgttgaaattcttatgttccttggctcacattct
tgttaggatactcatcattgtttccatgtttaaggcattaatccttgttg
ggtagcatggtgatgcatatcttggctatgtagccactcacaaggcagag
gcaggtggatctctgtgagttcaaggccagcttggtagtttccagacagc
caggactacacacagaaaccatgtcaaaaaaccccaaaatgaaacaaaaa
gggaccaatccttggtgatatgcatggcaagttgtttggttttttttttt
ttttttctattttgttattcacatttgctaatggtgtgttttttgtggat
attttaaatttccgtacattcaaactttttttttccccctaaatgatctt
ttttgagagtaacaattggaaaggcctcaggaaaggcagggcctagtttc
cagagagctgtgggtctggaggctgtctgagaacactagaagcctttctg
agcttttctggtggatttgtggggttgagcatcagtgaccttagaaagct
gggagcttgaggagcagtctgacttaaggaagaacattaaaagctgtcgc
tgcgggctgggtagaagatgtaacagaaacagaggcgtgtccggagccgt
ctgagtcttactcat
gaattcaggacactgcagcatagtgagaagcaacgaaggacttccctcct
accaacctttgggaactctgcgtaaggtgacattacccaggcagccaaca
ggcctcaaccctcctctttagagaaaggaaacccaggggaaactacatag
gatatctctgttaaagactttgaaatggaggccaactgggactcattcag
ttcacaaaagccaaggacatccaacttggtaaccattattatcatggaaa
gaaacggtctaattttgcactggtaaaatggtctctagagagggctatga
atcagcttgcagtatctgaagtgtctcactcaacaacctcactgtaaccc
ttacgtcagcagcctctcaactgctgaagtgttctgggcgatgctgtcat
tccctagactctccatgtcaggggcagcagactgtgatcaacttacagag
caggaaggtagagactgtcagatgcctgccagagaagccttggcacagtg
actttagcttggcccaaggggtctacagcattctttttttcagctgagca
tggacccccagccccatctccaaggtctccttactcccacagtactgctg
aagacagaactgatcgcctgggggaaggctatgttggtctgcatcaaaat
aaacttatcaggaggagcataggaaatgagaattgcaaaccacaaagaca
tcaaattttcaatgatcaataatctaagttctagaattctgatctgatca
ggaagagccaagtccacacaaaatgtaagtgacaacctctttcagggatt
atcttaaatactccaagaccaggggactgcaaactgtgatggtgagatcc
ctcttggctatgaagtcttctttagaaattgcctgggctttctgtgtctt
gagcagtaactgctcttcatctcacccagtggtttctggaatagttcatt
atactcaaaggcagaggtgttgggaaacaggatccgaatatgctgtgagc
gagctactgggaattgcacaacatcttgctatctattctggtgatgttat
gtctagaaacaagagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_86819383_86820400
seq2: B6Ng01-068I13.b_51_1064

seq1  GAATTCAAAAGTCAACTTAAGAGACTGGATTCTCTGCTGCCTTTCTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGTCAACTTAAGAGACTGGATTCTCTGCTGCCTTTCTGTAG  50

seq1  GTCGTTGGGCTTGAACTCTGGTCTTGGAAGCAAGATGCTTGGCAAGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTTGGGCTTGAACTCTGGTCTTGGAAGCAAGATGCTTGGCAAGGAGT  100

seq1  GTCTTAATGACTGGGCCAGGAAATTTGTTTGTTTGTTTGTTTAAAGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAATGACTGGGCCAGGAAATTTGTTTGTTTGTTTGTTTAAAGGCTT  150

seq1  TGGGCATTTGTTTTCTTACTTCCTTACACTAACTTTCTGAATGTTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTTGTTTTCTTACTTCCTTACACTAACTTTCTGAATGTTAAATT  200

seq1  CCTGGCTCCAAAGATGGGCACGTTTTAGTTTTCAATTCAAGCTACAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTCCAAAGATGGGCACGTTTTAGTTTTCAATTCAAGCTACAAGCC  250

seq1  TTTCTCCAGGAAGGTTGGTCTGTAAGGACGTCTGTCTTGTCTGCCATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAGGAAGGTTGGTCTGTAAGGACGTCTGTCTTGTCTGCCATGGT  300

seq1  TAGAAGATTGGATGGATTTCCTTCCTTTTCCCTTCCATACTTATTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGATTGGATGGATTTCCTTCCTTTTCCCTTCCATACTTATTTTTCT  350

seq1  TTTCATTTGTTTCTTGTGTTGAAATTCTTATGTTCCTTGGCTCACATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTGTTTCTTGTGTTGAAATTCTTATGTTCCTTGGCTCACATTCT  400

seq1  TGTTAGGATACTCATCATTGTTTCCATGTTTAAGGCATTAATCCTTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGATACTCATCATTGTTTCCATGTTTAAGGCATTAATCCTTGTTG  450

seq1  GGTAGCATGGTGATGCATATCTTGGCTATGTAGCCACTCACAAGGCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCATGGTGATGCATATCTTGGCTATGTAGCCACTCACAAGGCAGAG  500

seq1  GCAGGTGGATCTCTGTGAGTTCAAGGCCAGCTTGGTAGTTTCCAGACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGATCTCTGTGAGTTCAAGGCCAGCTTGGTAGTTTCCAGACAGC  550

seq1  CAGGACTACACACAGAAACCATGTCAAAAAACCCCAAAATGAAACAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTACACACAGAAACCATGTCAAAAAACCCCAAAATGAAACAAAAA  600

seq1  GGGACCAATCCTTGGTGATATGCATGGCAAGTTGTTTGGTTTTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAATCCTTGGTGATATGCATGGCAAGTTGTTTGGTTTTTTTTTTT  650

seq1  TTTTTTCTATTTTGTTATTCACATTTGCTAATGGTGTG-TTTTTGTGGAT  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTTTCTATTTTGTTATTCACATTTGCTAATGGTGTGTTTTTTGTGGAT  700

seq1  ATTTTAAATTTCCGTACATTCAAACTTTTTTTTTCCCCCTAAATGATC-T  748
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTTAAATTTCCGTACATTCAAACTTTTTTTTTCCCCCTAAATGATCTT  750

seq1  TTTTGAGAGTAACAATTGGAAAGGCCTCAGGAAAGGCAGGGCCTAGTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGAGTAACAATTGGAAAGGCCTCAGGAAAGGCAGGGCCTAGTTTC  800

seq1  CAGAGAGCTGTGGGTCTGGAGGCTGTCTGAGAACACTAGAAGCCATTCTG  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGAGAGCTGTGGGTCTGGAGGCTGTCTGAGAACACTAGAAGCCTTTCTG  850

seq1  AGCTTTTCTGGTGGAGTTGTGGGGTTGAGCAGCAGTGACCTTAGAAGAGC  898
      ||||||||||||||| ||||||||||||||| |||||||||||||| |||
seq2  AGCTTTTCTGGTGGATTTGTGGGGTTGAGCATCAGTGACCTTAGAA-AGC  899

seq1  TGGGAGCCTGAGGAGCAGTCTGACTGAAGGAAGAGCATTTAGAAAGCTGT  948
      ||||||| ||||||||||||||||| |||||||| ||||   ||||||||
seq2  TGGGAGCTTGAGGAGCAGTCTGACTTAAGGAAGAACATT--AAAAGCTGT  947

seq1  CGCTGCGGGCTGGGTAGCAGAGTGGTAACAGAAACAGAGGCGTGTCCGTG  998
      ||||||||||||||||| |||   |||||||||||||||||||||||| |
seq2  CGCTGCGGGCTGGGTAGAAGA--TGTAACAGAAACAGAGGCGTGTCCG-G  994

seq1  AGCGTTCTGAGTCTTACTCA  1018
      |||  |||||||||||||||
seq2  AGCCGTCTGAGTCTTACTCA  1014

seq1: chr6_86940541_86941615
seq2: B6Ng01-068I13.g_68_1134 (reverse)

seq1  AACTCTTGTTCTTAGACATAACATCACCAGATATGATAGCAAGGATGTTG  50
      ||||||||||  |||||||||||||||||||   |||||||| |||||||
seq2  AACTCTTGTTTCTAGACATAACATCACCAGAATAGATAGCAA-GATGTTG  49

seq1  TTGCATTTCCCCAGTAGCCTCGCTCACAGCATATTC-GATCCTGTTTTCC  99
       |||| || |||||||| |||||||||||||||||| ||||||| |||||
seq2  -TGCAATT-CCCAGTAG-CTCGCTCACAGCATATTCGGATCCTG-TTTCC  95

seq1  CCACACCTCTGCCTTTGAGTAATATTGAACTATTCCAGAAACCACTGGGT  149
      | |||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  CAACACCTCTGCCTTTGAGT-ATAATGAACTATTCCAGAAACCACTGGGT  144

seq1  GAGATGAAGAGCAGTTACTGCTCAAGACACAGAAAGCCACAGGCAATTTC  199
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGATGAAGAGCAGTTACTGCTCAAGACACAGAAAGCC-CAGGCAATTTC  193

seq1  TAAAGAAGACTTCATAGCCAAGAGGGATCTCACCATCACAGTTTGCAGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGACTTCATAGCCAAGAGGGATCTCACCATCACAGTTTGCAGTC  243

seq1  CCCTGGTCTTGGAGTATTTAAAGATAATCCCTGAAAGAGGTTGTCACTTA  299
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCTGGTCTTGGAGTATTT-AAGATAATCCCTGAAAGAGGTTGTCACTTA  292

seq1  CATTTTGTGTTGGACTTGGCTCTTCCTGATCAGATCAGAATTCTAGAACT  349
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTG-TGGACTTGGCTCTTCCTGATCAGATCAGAATTCTAGAACT  341

seq1  TAGATTATTGATCATTGAAAATTTGATGTCTTTGTGGTTTGCAATTCTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTATTGATCATTGAAAATTTGATGTCTTTGTGGTTTGCAATTCTCA  391

seq1  TTTCCTATGCTCCTCCTGATAAGTTTATTTTGATGCAGACCAACATAGCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATGCTCCTCCTGATAAGTTTATTTTGATGCAGACCAACATAGCC  441

seq1  TTCCCCCAGGCGATCAGTTCTGTCTTCAGCAGTACTGTGGGAGTAAGGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCAGGCGATCAGTTCTGTCTTCAGCAGTACTGTGGGAGTAAGGAG  491

seq1  ACCTTGGAGATGGGGCTGGGGGTCCATGCTCAGCTGAAAAAAAGAATGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGAGATGGGGCTGGGGGTCCATGCTCAGCTGAAAAAAAGAATGCT  541

seq1  GTAGACCCCTTGGGCCAAGCTAAAGTCACTGTGCCAAGGCTTCTCTGGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCCCTTGGGCCAAGCTAAAGTCACTGTGCCAAGGCTTCTCTGGCA  591

seq1  GGCATCTGACAGTCTCTACCTTCCTGCTCTGTAAGTTGATCACAGTCTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTGACAGTCTCTACCTTCCTGCTCTGTAAGTTGATCACAGTCTGC  641

seq1  TGCCCCTGACATGGAGAGTCTAGGGAATGACAGCATCGCCCAGAACACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGACATGGAGAGTCTAGGGAATGACAGCATCGCCCAGAACACTT  691

seq1  CAGCAGTTGAGAGGCTGCTGACGTAAGGGTTACAGTGAGGTTGTTGAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTGAGAGGCTGCTGACGTAAGGGTTACAGTGAGGTTGTTGAGTG  741

seq1  AGACACTTCAGATACTGCAAGCTGATTCATAGCCCTCTCTAGAGACCATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTTCAGATACTGCAAGCTGATTCATAGCCCTCTCTAGAGACCATT  791

seq1  TTACCAGTGCAAAATTAGACCGTTTCTTTCCATGATAATAATGGTTACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGTGCAAAATTAGACCGTTTCTTTCCATGATAATAATGGTTACCA  841

seq1  AGTTGGATGTCCTTGGCTTTTGTGAACTGAATGAGTCCCAGTTGGCCTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGATGTCCTTGGCTTTTGTGAACTGAATGAGTCCCAGTTGGCCTCC  891

seq1  ATTTCAAAGTCTTTAACAGAGATATCCTATGTAGTTTCCCCTGGGTTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAGTCTTTAACAGAGATATCCTATGTAGTTTCCCCTGGGTTTCC  941

seq1  TTTCTCTAAAGAGGAGGGTTGAGGCCTGTTGGCTGCCTGGGTAATGTCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAAAGAGGAGGGTTGAGGCCTGTTGGCTGCCTGGGTAATGTCAC  991

seq1  CTTACGCAGAGTTCCCAAAGGTTGGTAGGAGGGAAGTCCTTCGTTGCTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGCAGAGTTCCCAAAGGTTGGTAGGAGGGAAGTCCTTCGTTGCTTC  1041

seq1  TCACTATGCTGCAGTGTCCTGAATTC  1075
      ||||||||||||||||||||||||||
seq2  TCACTATGCTGCAGTGTCCTGAATTC  1067