BAC Information

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BAC

Clone NameB6Ng01-069A24
ChromosomeX (Build37)6 (Build37)
Map Location 111,331,728 - 111,332,80518,835,426 - 18,835,975
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG664918, Dach2, LOC237016, EG664945, EG634881
Downstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069A24.bB6Ng01-069A24.g
ACCDH887476DH887477
length1,0771,018
definitionDH887476|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A24, 5' end.DH887477|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(111,331,728 - 111,332,805)(18,835,426 - 18,835,975)
sequence
gaattctcagttgggtctagaggaaaagaggtattgatgatcatttgatt
ggtagtagaggtcccgttctcacctggaaataatttgtaagccttattat
taattctccccctctcttttgtggtgaagagaatctataatagttgttga
caatcatttcaagtaggtcggtaagtaaaggttactgaacccaggagatc
tgtaagggtgctaagcctttttgaaaaattgggttctgcatcttccaaat
atacagatcactagtaggccagtattacattggttggttctcctggtcat
ctggggatcctgtggccttaatgtggagggccactatggtgtctggtatc
tcatgcttggcctgttccctagaaagcaaacccctcatatgtggaggtct
aattaagagttcagctgcccctcctgctccctcaggtgctgccaccactt
cagtaaactccagtgctagttttggggcaactgtagccattgaccagttc
tggtagagggtaagagaagagagaaggaaatctgtaactccactctgctg
caaaacagggtagaaggggcagtggagaaggcagttggtttaggtatatc
tgtcttgtattatttcacagccaggatgtgccttggaagaagtagtggtt
acagcaaatcttgtgggttgtccacaaagtctttccaggtgatgatatag
ggaatttggactaggtacccaggccaaccattgatgacattttcttttta
ttttaattttgtgaattaaattttatgaggcctacatgaaatactttcag
taaaataaatatattattattgtactccttgtagatagtcaagactttac
catgtaattatactttttaaaaattatttatttgttaccttccagtcatt
gcccctcctcccagttccagctcccacagtcctcatcccattcctcctcc
cccttgcattctgagagggtgcccccaccccagccctctacttccctggg
gcctcaagtctctcaagggttaggctaatctttcccacctatggccagag
caagcattaatttctatgagtatcttc
gaattcttttgtgattgtgttacctcactcaggatgatgccctccaggtc
caggttttttttgtatccattcctctgttgaggggcatctgggttctttc
cagcttctggatattataaataaggctgctctggacatagtagcgcatgt
gtccttcttaccggttgggacattttctggatatatgcccaggagaggta
ttgctggatcctccgatagtactatgtccaattttctgaggaactgccag
actgatttccagagtggttgtacaagcttgcgatcccaccaacaatggag
gagtctttctccacatcctcgccagcatcttctgtcacctgaatttttga
tcttagccattctcagtggtgtgagatggaatttcagggttgttttgatt
tgcatttctctgatgattaaggatgttgaacattttttcaggtgtttctc
agcctttcagtattcctcgggtgagaattctttgttcagttctgagtccc
atcatttaagggggttatttgattttctggagtccaccgtcttgagttct
ttatatatattggatattagtcctcaatctgatttaagataggtaaagat
cctttcccaatctgttggtggtctttttgtcttattgacggtgtcttttg
ccttgaagaagctttgcagtttcatgaggtcccatttgtcaatccttgat
cttacagcacaagccattgctgtaagatcgctggaattttttccctgttc
ccatatcttcgagacttttccccactttctcctctataagtttcagtgtc
tctggttttatgtgaagttccttgatccacttagatttgaccttaataca
aggagagaggaatgggtcaatttcacatttcttctacatgataacaacca
gttgtaccagcaccatttgttgaaaatgctgtcttcttccaccggatggt
tttagctcctgttgaagatcaagtgacctaaggtgtgtgggttcatttct
gggtcttaattcaattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_111331728_111332805
seq2: B6Ng01-069A24.b_44_1120 (reverse)

seq1  GAAGAATACTCATAGAAAATAATGCTTGCTCTGGCCATAGTGGGAAAAGA  50
      |||| ||||||||||||| |||||||||||||||||||||  || |||||
seq2  GAAG-ATACTCATAGAAATTAATGCTTGCTCTGGCCATAGGTGGGAAAGA  49

seq1  TTAGCCTAACCCTTGAGAGACTTGAGGCCCCAGGGAAGTAGAGGGCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTAACCCTTGAGAGACTTGAGGCCCCAGGGAAGTAGAGGGCTGGG  99

seq1  GTGGGGGCACCCTCTCAG-ATGCAAGGGGGAGGAGGAATGGGATGAGGAA  149
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  GTGGGGGCACCCTCTCAGAATGCAAGGGGGAGGAGGAATGGGATGAGG-A  148

seq1  CTGTGGGAGCTGGAACTGGGAGGAGGGGCAATGACTGGAAGGTAAACAAA  199
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGTGGGAGCTGGAACTGGGAGGAGGGGCAATGACTGGAAGGT-AACAAA  197

seq1  TAAATAATTTTTAAAAAGTATAATTACATGGTAAAGTCTTGACTATCTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATTTTTAAAAAGTATAATTACATGGTAAAGTCTTGACTATCTAC  247

seq1  AAGGAGTACAATAATAATATATTTATTTTACTG-AAGTATTTCATGTAGG  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAGGAGTACAATAATAATATATTTATTTTACTGAAAGTATTTCATGTAGG  297

seq1  CCTCATAAAATTTAATTCACAAAATTAAAATAAAAAGAAAATGTCATCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAAAATTTAATTCACAAAATTAAAATAAAAAGAAAATGTCATCAA  347

seq1  TGGTTGGCCTGGGTACCTAGTCCAAATTCCCTATATCATCACCTGGAAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGCCTGGGTACCTAGTCCAAATTCCCTATATCATCACCTGGAAAG  397

seq1  ACTTTGTGGACAACCCACAAGATTTGCTGTAACCACTACTTCTTCCAAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTGGACAACCCACAAGATTTGCTGTAACCACTACTTCTTCCAAGG  447

seq1  CACATCCTGGCTGTGAAATAATACAAGACAGATATACCTAAACCAACTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTGGCTGTGAAATAATACAAGACAGATATACCTAAACCAACTGC  497

seq1  CTTCTCCACTGCCCCTTCTACCCTGTTTTGCAGCAGAGTGGAGTTACAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCACTGCCCCTTCTACCCTGTTTTGCAGCAGAGTGGAGTTACAGA  547

seq1  TTTCCTTCTCTCTTCTCTTACCCTCTACCAGAACTGGTCAATGGCTACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTCTCTTCTCTTACCCTCTACCAGAACTGGTCAATGGCTACAG  597

seq1  TTGCCCCAAAACTAGCACTGGAGTTTACTGAAGTGGTGGCAGCACCTGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCAAAACTAGCACTGGAGTTTACTGAAGTGGTGGCAGCACCTGAG  647

seq1  GGAGCAGGAGGGGCAGCTGAACTCTTAATTAGACCTCCACATATGAGGGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGAGGGGCAGCTGAACTCTTAATTAGACCTCCACATATGAGGGG  697

seq1  TTTGCTTTCTAGGGAACAGGCCAAGCATGAGATACCAGACACCATAGTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCTAGGGAACAGGCCAAGCATGAGATACCAGACACCATAGTGG  747

seq1  CCCTCCACATTAAGGCCACAGGATCCCCAGATGACCAGGAGAACCAACCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCACATTAAGGCCACAGGATCCCCAGATGACCAGGAGAACCAACCA  797

seq1  ATGTAATACTGGCCTACTAGTGATCTGTATATTTGGAAGATGCAGAACCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATACTGGCCTACTAGTGATCTGTATATTTGGAAGATGCAGAACCC  847

seq1  AATTTTTCAAAAAGGCTTAGCACCCTTACAGATCTCCTGGGTTCAGTAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCAAAAAGGCTTAGCACCCTTACAGATCTCCTGGGTTCAGTAAC  897

seq1  CTTTACTTACCGACCTACTTGAAATGATTGTCAACAACTATTATAGATTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTACCGACCTACTTGAAATGATTGTCAACAACTATTATAGATTC  947

seq1  TCTTCACCACAAAAGAGAGGGGGAGAATTAATAATAAGGCTTACAAATTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCACAAAAGAGAGGGGGAGAATTAATAATAAGGCTTACAAATTA  997

seq1  TTTCCAGGTGAGAACGGGACCTCTACTACCAATCAAATGATCATCAATAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGTGAGAACGGGACCTCTACTACCAATCAAATGATCATCAATAC  1047

seq1  CTCTTTTCCTCTAGACCCAACTGAGAATTC  1078
      ||||||||||||||||||||||||||||||
seq2  CTCTTTTCCTCTAGACCCAACTGAGAATTC  1077

seq1: chr6_18835426_18835975
seq2: B6Ng01-069A24.g_531_1080 (reverse)

seq1  GAATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGA  50
      |||| ||||| |||||||||| ||||||||||||||||  ||||||||||
seq2  GAATTGAATT-AAGACCCAGAAATGAACCCACACACCTTAGGTCACTTGA  49

seq1  TCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTC  100
      ||||| |||  |||||||||||||||| ||||||| ||||||||||||||
seq2  TCTTCAACA--GGAGCTAAAACCATCCGGTGGAAG-AAGACAGCATTTTC  96

seq1  AACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAG-AATGTG-A  148
      ||||| ||||||||| |||||||||||||||| |||||||| |||||| |
seq2  AACAAATGGTGCTGGTACAACTGGTTGTTATCATGTAGAAGAAATGTGAA  146

seq1  ATCGATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAA  198
      || || |||| | | ||||| |||| ||||||||||||||||||||||||
seq2  ATTGACCCATTCCTCTCTCCTTGTATTAAGGTCAAATCTAAGTGGATCAA  196

seq1  GGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGG  246

seq1  GGAAAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTG-AACAGAAC  297
      ||||||| || ||||||||||| | |||| |||| |||| |  |    ||
seq2  GGAAAAGTCTCGAAGATATGGGAACAGGGAAAAAATTCCAGCGATCTTAC  296

seq1  AGCAATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGA  346
      ||||||||| |||||||| || |  || || |||||||||||||| ||||
seq2  AGCAATGGCTTGTGCTGTAAGATCAAGGATTGACAAATGGGACCTCATGA  346

seq1  AACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGA  396
      |||| ||||| |||| ||||||||||||||||||||||||||||||||||
seq2  AACTGCAAAGCTTCTTCAAGGCAAAAGACACCGTCAATAAGACAAAAAGA  396

seq1  CCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGG  446
      |||||||||||||||||||||||||||||||||| |||||||||| | ||
seq2  CCACCAACAGATTGGGAAAGGATCTTTACCTATCTTAAATCAGATTGAGG  446

seq1  ACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAAT  496
      |||||||||||| ||||||||||||||||||| |||||||| ||||||||
seq2  ACTAATATCCAATATATATAAAGAACTCAAGACGGTGGACTCCAGAAAAT  496

seq1  CAAATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTCTCA  546
      ||||||||||| ||||   ||||| |||||||||||||||||||||||||
seq2  CAAATAACCCCCTTAAATGATGGGACTCAGAACTGAACAAAGAATTCTCA  546

seq1  CCTG  550
      || |
seq2  CCCG  550