BAC Information

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BAC

Clone NameB6Ng01-069D23
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,442 - 18,835,96897,421,085 - 97,421,790
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069D23.bB6Ng01-069D23.g
ACCDH887614DH887615
length951706
definitionDH887614|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D23, 5' end.DH887615|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(97,421,085 - 97,421,790)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagttttatcatac
agatctttcacctccttagttagagtcacgccaagatattttatattatt
t
gaattcatgaataagcatttgagtgagtgaaaggctcactgcctctactt
tcacagtgcaataaagcatctctgctaacagataaatttattttgctgtt
cacagttacaacttatctttgcatttatttcatatataaagtattataaa
aattaatggttagcataataatcattatgactgtatttagactttatgac
tcacttttaattgtattaagtggtagacttaaaattaaatatatatgaga
aactttattaactaatcacacaaactaattttttttcttttgtgacttgt
tctctgatgtttgggaaaatctattattcactgtggctgatctcactcct
tcaagtatggaaatgagttcatgctttggtgaataatctcaaaagaaagc
tatgaaaatagaatacttaagaaactctgagccatattatatgaacagga
tcacaggcacaacttttgacacatgtgtaacttatatgtagataaacttg
gcatgcgtatagctggcagaaatccaaaagaccctcaccatggaaattat
attagttatattaggtttctcttgtcttctcttgtcttctctctctctct
ctctctctatatatatatatatatatatatatatacatatatgtgtgtat
atatatacatatatgtatatatatatatatgtatatatatatatgtatag
atatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-069D23.b_47_574 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| |||||||| |||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || |  ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACTGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr12_97421085_97421790
seq2: B6Ng01-069D23.g_67_772 (reverse)

seq1  ATATATACATACATATATATATATACATATATATATATATACATATATGT  50
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTATACATATATATATATACATATATATATATATACATATATGT  50

seq1  ATATATATACACACATATATGTATATATATATATATATATATATATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATATATATACACACATATATGTATATATATATATATATATATATATATAG  100

seq1  AGAGAGAGAGAGAGAGAGAAGACAAGAGAAGACAAGAGAAACCTAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAAGACAAGAGAAGACAAGAGAAACCTAATATA  150

seq1  ACTAATATAATTTCCATGGTGAGGGTCTTTTGGATTTCTGCCAGCTATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATAATTTCCATGGTGAGGGTCTTTTGGATTTCTGCCAGCTATAC  200

seq1  GCATGCCAAGTTTATCTACATATAAGTTACACATGTGTCAAAAGTTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCAAGTTTATCTACATATAAGTTACACATGTGTCAAAAGTTGTGC  250

seq1  CTGTGATCCTGTTCATATAATATGGCTCAGAGTTTCTTAAGTATTCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCCTGTTCATATAATATGGCTCAGAGTTTCTTAAGTATTCTATT  300

seq1  TTCATAGCTTTCTTTTGAGATTATTCACCAAAGCATGAACTCATTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCTTTCTTTTGAGATTATTCACCAAAGCATGAACTCATTTCCAT  350

seq1  ACTTGAAGGAGTGAGATCAGCCACAGTGAATAATAGATTTTCCCAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGGAGTGAGATCAGCCACAGTGAATAATAGATTTTCCCAAACAT  400

seq1  CAGAGAACAAGTCACAAAAGAAAAAAAATTAGTTTGTGTGATTAGTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACAAGTCACAAAAGAAAAAAAATTAGTTTGTGTGATTAGTTAAT  450

seq1  AAAGTTTCTCATATATATTTAATTTTAAGTCTACCACTTAATACAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCTCATATATATTTAATTTTAAGTCTACCACTTAATACAATTAA  500

seq1  AAGTGAGTCATAAAGTCTAAATACAGTCATAATGATTATTATGCTAACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTCATAAAGTCTAAATACAGTCATAATGATTATTATGCTAACCA  550

seq1  TTAATTTTTATAATACTTTATATATGAAATAAATGCAAAGATAAGTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTATAATACTTTATATATGAAATAAATGCAAAGATAAGTTGTA  600

seq1  ACTGTGAACAGCAAAATAAATTTATCTGTTAGCAGAGATGCTTTATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAACAGCAAAATAAATTTATCTGTTAGCAGAGATGCTTTATTGCA  650

seq1  CTGTGAAAGTAGAGGCAGTGAGCCTTTCACTCACTCAAATGCTTATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAAGTAGAGGCAGTGAGCCTTTCACTCACTCAAATGCTTATTCAT  700

seq1  GAATTC  706
      ||||||
seq2  GAATTC  706