BAC Information

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BAC

Clone NameB6Ng01-069E21
Chromosome6 (Build37)
Map Location 143,140,540 - 143,266,965
singlet/doubletdoublet
Overlap geneEtnk1, D6Ertd474e
Upstream geneSlco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik, Cmas, Gm766, EG665037, St8sia1, LOC665056, 5730419I09Rik
Downstream geneSox5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069E21.bB6Ng01-069E21.g
ACCDH887653DH887654
length1651,076
definitionDH887653|Mus musculus domesticus DNA, BAC clone: B6Ng01-069E21, 5' end.DH887654|Mus musculus domesticus DNA, BAC clone: B6Ng01-069E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,266,801 - 143,266,965)(143,140,540 - 143,141,640)
sequence
gaattccatatacactggacacacctgccaccgttcatcctggataccat
gaagagagctggatcaagcagccaaggactgagtagaacaggactttagc
tgtcattcagacaaattcagaaggaaggaagaaaagaaggaaggaggaag
gaagggagggaggaa
gaattcctgtgaactttcctcaccgctgtttctccatgtctaagagctgg
gctggaaagggtccgactctcaaataggtgacttttcttttcatttgtaa
taagataaggtcaagacatgtgtcttgttataattatatagccttgttta
gttcgtttttggctttaacatgctttaataaatggaagactagttttctt
gcattgagatttgaccagtttaactggatttttcctacagtggtgagggc
ttcaagcagtagtaaaaaaaatcaaaaatatttttgaaaattcaaattca
tccattatttgctttgtgttgtgtgtcactggtgcaattatttaaagatt
ataaaaatcaatgctagcctttaagctgatcattttttttaaaggttaag
gatgccctgagaatctggatgatctagaagcccctccttgggaagtgagt
gtgcacatcagattctagggtgtgttttcattatctgttcacctttgaga
cctcaaggagaaattcttgtctgaaggaattagttattaagagtaatgga
cattattaatactgggaaatattaaaaaaaattaaactcacggtgaaaag
aaacaacatgttctgttgctaggagaatatttcccagtgctgtaatttga
tttttctggcaccctaaagatcataagacctctttaattttacattgttg
cagaatcttaaatttaaggttgagttccactttgttaatgatttgaaaca
gattagttaatgcagattttaaacattttctttcctttaaagctttgtgt
cttgtacaatgtgagtttgccaaattctcttcatctgctacagataggta
tgccattgctgctgccatgtggcggccccccgtgcttcttaaacgcactg
actggagcttttcgccctcacttgtcacatgcacgagcctggtaacagcc
ccatctgtattttgtagcttcatttctatcttagattcatataactcaca
tagcttttaaacgtaagcagtgtatgagttacgctactcaagtcactcta
aacttttcagtgaacgatttaacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_143266801_143266965
seq2: B6Ng01-069E21.b_43_207 (reverse)

seq1  TTCCTCCCTCCCTTCCTTCCTCCTTCCTTCTTTTCTTCCTTCCTTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCTCCCTTCCTTCCTCCTTCCTTCTTTTCTTCCTTCCTTCTGAA  50

seq1  TTTGTCTGAATGACAGCTAAAGTCCTGTTCTACTCAGTCCTTGGCTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGAATGACAGCTAAAGTCCTGTTCTACTCAGTCCTTGGCTGCTT  100

seq1  GATCCAGCTCTCTTCATGGTATCCAGGATGAACGGTGGCAGGTGTGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGCTCTCTTCATGGTATCCAGGATGAACGGTGGCAGGTGTGTCCA  150

seq1  GTGTATATGGAATTC  165
      |||||||||||||||
seq2  GTGTATATGGAATTC  165

seq1: chr6_143140540_143141640
seq2: B6Ng01-069E21.g_69_1144

seq1  GAATTCCTGTGAACTTTCCTCACCGCTGTTTCTCCATGTCTAAGAGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGAACTTTCCTCACCGCTGTTTCTCCATGTCTAAGAGCTGG  50

seq1  GCTGGAAAGGGTCCGACTCTCAAATAGGTGACTTTTCTTTTCATTTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAGGGTCCGACTCTCAAATAGGTGACTTTTCTTTTCATTTGTAA  100

seq1  TAAGATAAGGTCAAGACATGTGTCTTGTTATAATTATATAGCCTTGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAAGGTCAAGACATGTGTCTTGTTATAATTATATAGCCTTGTTTA  150

seq1  GTTCGTTTTTGGCTTTAACATGCTTTAATAAATGGAAGACTAGTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTTTTTGGCTTTAACATGCTTTAATAAATGGAAGACTAGTTTTCTT  200

seq1  GCATTGAGATTTGACCAGTTTAACTGGATTTTTCCTACAGTGGTGAGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAGATTTGACCAGTTTAACTGGATTTTTCCTACAGTGGTGAGGGC  250

seq1  TTCAAGCAGTAGTAAAAAAAATCAAAAATATTTTTGAAAATTCAAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCAGTAGTAAAAAAAATCAAAAATATTTTTGAAAATTCAAATTCA  300

seq1  TCCATTATTTGCTTTGTGTTGTGTGTCACTGGTGCAATTATTTAAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTTGCTTTGTGTTGTGTGTCACTGGTGCAATTATTTAAAGATT  350

seq1  ATAAAAATCAATGCTAGCCTTTAAGCTGATCATTTTTTTTAAAGGTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATCAATGCTAGCCTTTAAGCTGATCATTTTTTTTAAAGGTTAAG  400

seq1  GATGCCCTGAGAATCTGGATGATCTAGAAGCCCCTCCTTGGGAAGTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCTGAGAATCTGGATGATCTAGAAGCCCCTCCTTGGGAAGTGAGT  450

seq1  GTGCACATCAGATTCTAGGGTGTGTTTTCATTATCTGTTCACCTTTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATCAGATTCTAGGGTGTGTTTTCATTATCTGTTCACCTTTGAGA  500

seq1  CCTCAAGGAGAAATTCTTGTCTGAAGGAATTAGTTATTAAGAGTAATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGGAGAAATTCTTGTCTGAAGGAATTAGTTATTAAGAGTAATGGA  550

seq1  CATTATTAATACTGGGAAATATTAAAAAAAATTAAACTCACGGTGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTAATACTGGGAAATATTAAAAAAAATTAAACTCACGGTGAAAAG  600

seq1  AAACAACATGTTCTGTTGCTAGGAGAATATTTCCCAGTGCTGTAATTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACATGTTCTGTTGCTAGGAGAATATTTCCCAGTGCTGTAATTTGA  650

seq1  TTTTTCTGGCACCCTAAAGATCATAAGACCTCTTTAATTTTACATTGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGCACCCTAAAGATCATAAGACCTCTTTAATTTTACATTGTTG  700

seq1  CAGAATCTTAAATTTAAGGTTGAGTTCCACTTTG-TAATGATTTGAAACA  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGAATCTTAAATTTAAGGTTGAGTTCCACTTTGTTAATGATTTGAAACA  750

seq1  GAATAGTTAATGCAGATTTTAAACA-TTTCTTTCCTTTAAAGCTTTGTGT  798
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GATTAGTTAATGCAGATTTTAAACATTTTCTTTCCTTTAAAGCTTTGTGT  800

seq1  CTTGTACAATGTGAGTTTGCCAAATTCTCTTCATCTGCTACAGATTAGGT  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTGTACAATGTGAGTTTGCCAAATTCTCTTCATCTGCTACAGA-TAGGT  849

seq1  ATGCCATTGCTGCTGCCATGTGGCGGCGCCCCGTGCTTCTTAAACGCACT  898
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGCCATTGCTGCTGCCATGTGGCGGCCCCCCGTGCTTCTTAAACGCACT  899

seq1  GACTGGAGCTTTGTCG-CCTCACTTGTTCACATGCACGGAGCCTGGTAAC  947
      |||||||||||| ||| ||||||||| |||||||||| ||||||||||||
seq2  GACTGGAGCTTT-TCGCCCTCACTTG-TCACATGCAC-GAGCCTGGTAAC  946

seq1  AGCCCCATCTGTATTTTGTTAGCTTCATTTTCTTATCTTTAGATTTCATT  997
      |||||||||||||||||| |||||||||||   |||| ||||| |||| |
seq2  AGCCCCATCTGTATTTTG-TAGCTTCATTT--CTATC-TTAGA-TTCA-T  990

seq1  ATAAACTCAACATAGCTTTTAAACGTAAAGGCCAGTGTTAATGAGTTAAC  1047
      || ||||| |||||||||||||||||||    ||||||  ||||||| ||
seq2  AT-AACTC-ACATAGCTTTTAAACGTAA---GCAGTGT--ATGAGTT-AC  1032

seq1  GCTACTACAAAAGTCACTGCTAAAACTTTTCATGTTGAAACAGATTTTAA  1097
      ||||||    |||||||| || ||||||||||   ||||  |   |||||
seq2  GCTACT---CAAGTCACT-CT-AAACTTTTCA--GTGAACGA---TTTAA  1072

seq1  CTTT  1101
      ||||
seq2  CTTT  1076