BAC Information

Click to search

BAC

Clone NameB6Ng01-069H08
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,442 - 18,835,96884,676,431 - 84,677,571
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H08.bB6Ng01-069H08.g
ACCDH887762DH887763
length1,0191,128
definitionDH887762|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H08, 5' end.DH887763|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(84,676,431 - 84,677,571)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggatagataaagatcctttcccaatctgttggtggtct
ctttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttaagagtcacgccgagatattttatattc
tttgtgactattgaaacgtgttgtttccctaatttcttttctcagcctgt
ttattctttgtgtagagaa
gaattccaggacagccagggctacacagagaaaccctgtcctgaaaaaca
aaataaaataaaatgaaatacccaaaagcatgaaatgcttcatcagcctc
attccctataccatccccaatatcccttggctcttaaattagttctaaca
aaaatagaatgtaagcaataatggttatttcattatttatcatttttctt
ccctgttaactaattcaatgtaatactgatcactatgttgcatacagaca
gaacttgaagactaaccaacagaagtaaacatttattaactatcagaaaa
atgagcataatactgttctggagggaaaaagacagtgcatatttaatcaa
gtctacctacaggcccttttaaaaagtagagaaaacattatttattaata
atttatcaataataagttaaaagtatgatttttctttcctgtgtgatgct
aaggatggaacccagggctttaagcatggtaagcaaggaatataccgttg
tcttagttactgttctactgcactgaggacataaggaccaaaacaacttt
ttagaagaacttaactggaggcttgcttagtttcaggtggtgagctcata
actactacaacatgaagcatggcagcaggcaggcatggccctggaaaagg
agctgacagattatatcttgtcaacaggtttgaggcagagagagacactg
gtcctagtcttggcttttgaaacctcagagcccaacccctagtgacagct
ccttcaacaaaacccacaccacctaacccttcctaagcagtttcacctac
taaggaccaaactttcaaatatatgaatcattgggggccattctcattca
agccatcataaccacatccccagccctcatgattactttcaataaagtaa
ctagtttctttcttaactataagtaactcaatgtcaaattcttcctttga
gaagttaaatactgtatgtagtagaggtcttgagtgtttgcctagcatga
cagggcttggtagatctcagctccctcccctgctccctcatccacccatc
ttttcatcagtcaatcatcatcctcagaaatctacaacacactggtggca
ggacattctttggccattttatcttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-069H08.b_44_571 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| ||||||||||||  |||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCAAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACTGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTATCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr3_84676431_84677571
seq2: B6Ng01-069H08.g_70_1197 (reverse)

seq1  TACACAGATAAAAATGGGCCAAAGAATGTCCTGCCACAAAGTTGTGT-TT  49
      |||| ||||||||   ||||||||||||||||||||| |    |||| ||
seq2  TACA-AGATAAAA--TGGCCAAAGAATGTCCTGCCACCA----GTGTGTT  43

seq1  GTAGTTTTCTGAGGATGGATGAATGGACTGATGGACAGATGGGTGGATGG  99
      |||| ||||||||||| |||| || |||||||| | |||||||||||| |
seq2  GTAGATTTCTGAGGAT-GATG-ATTGACTGATGAAAAGATGGGTGGAT-G  90

seq1  AGGGAGCAGGGGAGGGAGCTGGAGATCTAACCAAGGCCCTTGTTCATGCT  149
      |||||||||||||||||||| ||||||| ||||| |||||   |||||||
seq2  AGGGAGCAGGGGAGGGAGCT-GAGATCT-ACCAA-GCCCT--GTCATGCT  135

seq1  AGGCAAACACTCAAGACCTCTACTACATACAGTATTTAACTTCTCAAAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACACTCAAGACCTCTACTACATACAGTATTTAACTTCTCAAAGG  185

seq1  AAGAATTTGACATTGAGTTACTTATAGTTAAGAAGGAAACTAGTTACTTT  249
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGAATTTGACATTGAGTTACTTATAGTTAAGAAAGAAACTAGTTACTTT  235

seq1  ATTG-AAGTAATCATGAGGGCTGGGGATGTGGTTATGATGGCTTGAATGA  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTAATCATGAGGGCTGGGGATGTGGTTATGATGGCTTGAATGA  285

seq1  GAATGGCCCCCAATGATTCATATATTTGAAAGTTTGGTCCTTAGTAGGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCCCCCAATGATTCATATATTTGAAAGTTTGGTCCTTAGTAGGTG  335

seq1  AAACTGCTTAGGAAGGGTTAGGTGGTGTGGGTTTTGTTGAAGGAGCTGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTTAGGAAGGGTTAGGTGGTGTGGGTTTTGTTGAAGGAGCTGTC  385

seq1  ACTAGGGGTTGGGCTCTGAGGTTTCAAAAGCCAAGACTAGGACCAGTGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGGTTGGGCTCTGAGGTTTCAAAAGCCAAGACTAGGACCAGTGTC  435

seq1  TCTCTCTGCCTCAAACCTGTTGACAAGATATAATCTGTCAGCTCCTTTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGCCTCAAACCTGTTGACAAGATATAATCTGTCAGCTCCTTTTC  485

seq1  CAGGGCCATGCCTGCCTGCTGCCATGCTTCATGTTGTAGTAGTTATGAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCATGCCTGCCTGCTGCCATGCTTCATGTTGTAGTAGTTATGAGC  535

seq1  TCACCACCTGAAACTAAGCAAGCCTCCAGTTAAGTTCTTCTAAAAAGTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACCTGAAACTAAGCAAGCCTCCAGTTAAGTTCTTCTAAAAAGTTG  585

seq1  TTTTGGTCCTTATGTCCTCAGTGCAGTAGAACAGTAACTAAGACAACGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTCCTTATGTCCTCAGTGCAGTAGAACAGTAACTAAGACAACGGT  635

seq1  ATATTCCTTGCTTACCATGCTTAAAGCCCTGGGTTCCATCCTTAGCATCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCTTGCTTACCATGCTTAAAGCCCTGGGTTCCATCCTTAGCATCA  685

seq1  CACAGGAAAGAAAAATCATACTTTTAACTTATTATTGATAAATTATTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAAAGAAAAATCATACTTTTAACTTATTATTGATAAATTATTAAT  735

seq1  AAATAATGTTTTCTCTACTTTTTAAAAGGGCCTGTAGGTAGACTTGATTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTTTTCTCTACTTTTTAAAAGGGCCTGTAGGTAGACTTGATTA  785

seq1  AATATGCACTGTCTTTTTCCCTCCAGAACAGTATTATGCTCATTTTTCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCACTGTCTTTTTCCCTCCAGAACAGTATTATGCTCATTTTTCTG  835

seq1  ATAGTTAATAAATGTTTACTTCTGTTGGTTAGTCTTCAAGTTCTGTCTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAATAAATGTTTACTTCTGTTGGTTAGTCTTCAAGTTCTGTCTGT  885

seq1  ATGCAACATAGTGATCAGTATTACATTGAATTAGTTAACAGGGAAGAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACATAGTGATCAGTATTACATTGAATTAGTTAACAGGGAAGAAAA  935

seq1  ATGATAAATAATGAAATAACCATTATTGCTTACATTCTATTTTTGTTAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAATAATGAAATAACCATTATTGCTTACATTCTATTTTTGTTAGA  985

seq1  ACTAATTTAAGAGCCAAGGGATATTGGGGATGGTATAGGGAATGAGGCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTAAGAGCCAAGGGATATTGGGGATGGTATAGGGAATGAGGCTG  1035

seq1  ATGAAGCATTTCATGCTTTTGGGTATTTCATTTTATTTTATTTTGTTTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCATTTCATGCTTTTGGGTATTTCATTTTATTTTATTTTGTTTTT  1085

seq1  CAGGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1128