BAC Information

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BAC

Clone NameB6Ng01-069H15
Chromosome6 (Build37)
Map Location 14,735,623 - 14,736,748
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797, Ppp1r3a
Downstream geneFoxp2, LOC100040568, Mdfic
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H15.bB6Ng01-069H15.g
ACCDH887776DH887777
length1,1211,204
definitionDH887776|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H15, 5' end.DH887777|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttaaaagtttaaaactaaatctactctatttcttggctgtaag
cactccttggtgtactcccaatgaacttagcatcctcctgggtagaaact
tactcaaccatgttccatgtttccctattcataatagctaggaaatggaa
acaagctaaaggttctttaactgacaaacgcatagtaaatgtatacttca
ttcacactatgcttggctgttgtcatgtaaatgcaagtaacatcattaac
tttgtgggtaagtgagtaagtagaacaaacaaagaacacattgaatgagg
taaacctgaccaaggaagacacacatcacaggttctctctcatctgatac
tcctggctccaaatcttcatatatgagcacatatttaagttacgcttggt
aacatttttagttttaatttgtttggttttctgcctgttctatctggaga
ggtaaaagtcagagtatcaatgaggtttcattcttatgccaactgcaaca
gatctccttagagaccatttgagaaaatttaatctggagtccacctccat
agaaaaagatgcactgagcatgttacataaaaggaagatggagatgatta
agtcatcatagatggtaatgcagcagatttaattagtgtttttctagcat
ctgctatgtggctccatatgtgaaattgcaagagatactgagataaagat
gagttttgagtctaataatgagaatgaaaatgagaatgtgagaagccaag
aaactataatgtattgagtgattataaaagatatttgaaggtccaaaata
aagctcattaaacttgagaaaaaaattattttagttcaaagtagttttgt
tgtttaggttaatttatttatttatttttataaagaattattttttttta
ctttatgtgtatgagtgtctgcgtgaaagtatttaagtgttccatatgaa
tgcctggtgcctgtggatgccagaagagaccatcatattcctagcactac
tactatctggaattacagatgtctaaaaaaaaaataccatagcagtttct
tcaattaggcctcaattccctcagaagcagccagggctttaatcctgagt
catcctcccagccctgaaatg
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggcttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
tcaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcaatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgtttttttga
gttcttcaggatctgttgttatgtctcccttttcatttctgattttgtta
attaggattttgtccctgtgacctttagtgagtctagctaagggtttatc
tatcttgtttgattttctcaaagaaccaactcctcgtttggttaattctt
tgaatagttctttcttgtttccacttggttgatttcacccctgagtttga
ttatttcctgccatctactcctcttgggtgaatttgctttcctttttttc
tagggcttttagatgtgttgtcagctgctagtatgtgctgtctctgtttc
ttcttggaggcactcagagctatgagtttccctcttagaaatgctttcat
tgtgtccaataggtttgggtacgttgtggcttcatttcattaacctctaa
aaagttttatattcttcctttatccctccttaccaaggtatctattgaga
agagggttgtcgttcccatgaaagttgctccattataagtgttatgagat
cggctaagcatgggtctgagtgaacacgggacattcaattttgtcttgaa
gccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_14735623_14736748
seq2: B6Ng01-069H15.b_46_1166

seq1  GAATTCCTTAAAAGTTTAAAACTAAATCTACTCTATTTCTTGGCTGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAAAGTTTAAAACTAAATCTACTCTATTTCTTGGCTGTAAG  50

seq1  CACTCCTTGGTGTACTCCCAATGAACTTAGCATCCTCCTGGGTAGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTGGTGTACTCCCAATGAACTTAGCATCCTCCTGGGTAGAAACT  100

seq1  TACTCAACCATGTTCCATGTTTCCCTATTCATAATAGCTAGGAAATGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAACCATGTTCCATGTTTCCCTATTCATAATAGCTAGGAAATGGAA  150

seq1  ACAAGCTAAAGGTTCTTTAACTGACAAACGCATAGTAAATGTATACTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTAAAGGTTCTTTAACTGACAAACGCATAGTAAATGTATACTTCA  200

seq1  TTCACACTATGCTTGGCTGTTGTCATGTAAATGCAAGTAACATCATTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTATGCTTGGCTGTTGTCATGTAAATGCAAGTAACATCATTAAC  250

seq1  TTTGTGGGTAAGTGAGTAAGTAGAACAAACAAAGAACACATTGAATGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGTAAGTGAGTAAGTAGAACAAACAAAGAACACATTGAATGAGG  300

seq1  TAAACCTGACCAAGGAAGACACACATCACAGGTTCTCTCTCATCTGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGACCAAGGAAGACACACATCACAGGTTCTCTCTCATCTGATAC  350

seq1  TCCTGGCTCCAAATCTTCATATATGAGCACATATTTAAGTTACGCTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTCCAAATCTTCATATATGAGCACATATTTAAGTTACGCTTGGT  400

seq1  AACATTTTTAGTTTTAATTTGTTTGGTTTTCTGCCTGTTCTATCTGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTAGTTTTAATTTGTTTGGTTTTCTGCCTGTTCTATCTGGAGA  450

seq1  GGTAAAAGTCAGAGTATCAATGAGGTTTCATTCTTATGCCAACTGCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAGTCAGAGTATCAATGAGGTTTCATTCTTATGCCAACTGCAACA  500

seq1  GATCTCCTTAGAGACCATTTGAGAAAATTTAATCTGGAGTCCACCTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCTTAGAGACCATTTGAGAAAATTTAATCTGGAGTCCACCTCCAT  550

seq1  AGAAAAAGATGCACTGAGCATGTTACATAAAAGGAAGATGGAGATGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGATGCACTGAGCATGTTACATAAAAGGAAGATGGAGATGATTA  600

seq1  AGTCATCATAGATGGTAATGCAGCAGATTTAATTAGTGTTTTTCTAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCATAGATGGTAATGCAGCAGATTTAATTAGTGTTTTTCTAGCAT  650

seq1  CTGCTATGTGGCTCCATATGTGAAATTGCAAGAGATACTGAGATAAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATGTGGCTCCATATGTGAAATTGCAAGAGATACTGAGATAAAGAT  700

seq1  GAGTTTTGAGTCTAATAATGAGAATGAAAATGAGAATGTGAGAAGCCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGAGTCTAATAATGAGAATGAAAATGAGAATGTGAGAAGCCAAG  750

seq1  AAACTATAATGTATTGAGTGATTAT-AAAGATATTTGAAGGTCCAAAATA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAACTATAATGTATTGAGTGATTATAAAAGATATTTGAAGGTCCAAAATA  800

seq1  AAGCTCATTAAACTTGAGAAAAAAATTATTTTAGTTCAAAGTAGTTTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATTAAACTTGAGAAAAAAATTATTTTAGTTCAAAGTAGTTTTGT  850

seq1  TGTTTAGGTTAATTTATTTATTTATTTTTATAAAGAATTATTTTTTTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGTTAATTTATTTATTTATTTTTATAAAGAATTATTTTTTTTTA  900

seq1  CTTTATGTGTATGAGTGTCTGCGTGAAAGTATTTAAGTGTTCCATATGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTGTATGAGTGTCTGCGTGAAAGTATTTAAGTGTTCCATATGAA  950

seq1  TGCCTGGTGCCTGTGGATGCCAGAAGAGACCATCATATTCCTAGCACTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTGCCTGTGGATGCCAGAAGAGACCATCATATTCCTAGCACTAC  1000

seq1  TACTATCTGGAATTACAGATGTCTAAAAAAAAAAAATACCATAGCAGTTT  1049
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  TACTATCTGGAATTACAGATGTCT--AAAAAAAAAATACCATAGCAGTTT  1048

seq1  CTTCAATAAGACTTCAATT-CCTCATGAAAGCAGCCAGTGCTCTTAATCA  1098
      ||||||| || | |||||| |||||   |||||||||| ||| |||||| 
seq2  CTTCAATTAGGCCTCAATTCCCTCA--GAAGCAGCCAGGGCT-TTAATC-  1094

seq1  CTGAGTCATCTCTCCAGCCCTGATAATG  1126
      ||||||||||   |||||||||| ||||
seq2  CTGAGTCATCCTCCCAGCCCTGA-AATG  1121