BAC Information

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BAC

Clone NameB6Ng01-069I08
Chromosome6 (Build37)18 (Build37)
Map Location 18,835,451 - 18,835,96887,335,786 - 87,336,314
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069I08.bB6Ng01-069I08.g
ACCDH887802DH887803
length9981,103
definitionDH887802|Mus musculus domesticus DNA, BAC clone: B6Ng01-069I08, 5' end.DH887803|Mus musculus domesticus DNA, BAC clone: B6Ng01-069I08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,451 - 18,835,968)(87,335,786 - 87,336,314)
sequence
gaattctttgttcagttctgtgccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaacttgggagtttca
ttaggtcccatttgtcaattctcgatcttaaagcacaagccgttgttgtt
ctgttcaggaatttttccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagtaccttgat
ccaattagatttgaccttagtacaaggagataagtatggattgattcaca
tgcttctacatgataacaaccagttgtgacagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagatcaagta
gccatagatatgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccacacagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccacaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaatttgctccttctaattcaatgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaatatagccacttt
tacaattttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttcttaatttctttcttcagggacttgaagtttttatcataca
gatcattcacttccttagttagagtcacgccagatattttatattatttg
tgactattgagatggtgttgtttccctatttcttctcagcctgtttat
gaattctttgtttagctctgtgccccattttttaatggggttatttgatt
ttctggagtctaccttcttgagttctttatataaacctgataaacagctt
cagtgaagtagctggatataaaattaactcaaacaagtcaatggcctttc
tctacacaaagaataaacaggctgagaaagaaattagggaaacaacaccc
ttcataatagtcacaactaatataaaatactttggtgtgactctaagtaa
ggaagtgaaagatctgtatgataagaactttaagtctctgaagaaagaaa
tcaaagaagatctcagaagacagaaagatctcctatgctcatggattgga
ttgatcaatatagtaaaaatggctatcttgctgaaagcaatctacagatt
caatgcaatccccatcaaaattccaactcaattcttcaacgaattagaaa
gggaaatttgcaaattcatctggagtaacaaaaaccctaggaaagcaaaa
actcttctcaatgataaaagagtctctggtggaatcaccatgcctgacct
aactctgtactacagagcaattgtgatgaaaacttcatggtactggtata
gtgacagacaggtagaccaatgaaatagaattgaagacccagaaatgaat
ccacacttaatctttgacaagggagctaaaaccatccagtggaaaaaaag
acagcattttcaacaaatggtgctggcacaactggcagttatcatgtaga
agaatgtgaattgatccattcttatctcctggtacaaagctcaagtctaa
gtggatcaaagaactccacataaaaccagagacactgaaacttatagagg
agaaagtggggaaaagcctcgaagatatgggcacaggggaaaaattcctg
aatagaacagcaatggcttgtactgtagattgaaattaacaagtaggacc
tcataaaattgcaaagctctgtaaggcaaaagacactgtcataagataaa
aggtcacaacagactgggaaaggatcttatcaatctaatcagataggaga
atatctaaggacatatttctatactggtcatatgactccatattcaccaa
tac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835451_18835968
seq2: B6Ng01-069I08.b_49_566 (reverse)

seq1  AACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50
      |||||||| | ||||||  |||||||||| ||||||||||||||||||||
seq2  AACCCACATATCTATGGCTACTTGATCTTTGACAAGGGAGCTAAAACCAT  50

seq1  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGT  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGTCACAACTGGT  100

seq1  TGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACT  150
      ||||||| |||||||| ||||||||| |||||||||||||||| ||||||
seq2  TGTTATCATGTAGAAGCATGTGAATCAATCCATACTTATCTCCTTGTACT  150

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACT  200
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  AAGGTCAAATCTAATTGGATCAAGGTACTTCACATAAAACCAGAGACACT  200

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACA-  249

seq1  GGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGA  299
      ||||||| ||||||||||||||| ||| ||| |||||| | || | ||||
seq2  GGGAAAAATTCCTGAACAGAACAACAACGGCTTGTGCTTTAAGATCGAGA  299

seq1  ATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGA  349
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATTGACAAATGGGACCTAATGAAACTCCCAAGTTTCTGCAAGGCAAAAGA  349

seq1  CACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTA  399

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTC  449

seq1  AAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTC  499
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  AAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCAC  499

seq1  AGAACTGAACAAAGAATTC  518
      |||||||||||||||||||
seq2  AGAACTGAACAAAGAATTC  518

seq1: chr18_87335786_87336314
seq2: B6Ng01-069I08.g_658_1171

seq1  GTACTGGTATAGTGACAGACAGGTAGACCAATGAAATAGAATTGAAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGTATAGTGACAGACAGGTAGACCAATGAAATAGAATTGAAGACC  50

seq1  CAGAAATGAATCCACACTTAATCTTTGACAAGGGAGCTAAAACCATCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGAATCCACACTTAATCTTTGACAAGGGAGCTAAAACCATCCAG  100

seq1  TGGAAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCAGT  150

seq1  TATCATGTAGAAGAATGTGAATTGATCCATTCTTATCTCCTGGTACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTAGAAGAATGTGAATTGATCCATTCTTATCTCCTGGTACAAAG  200

seq1  CTCAAGTCTAAGTGGATCAAAGAACTCCACATAAAACCAGAGACACTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTCTAAGTGGATCAAAGAACTCCACATAAAACCAGAGACACTGAA  250

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGATATGGGCACAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGATATGGGCACAGGGG  300

seq1  AAAAATTCCTGAATAGAACAGCAATGGCTTGTACTGTAAGATTGAGAATT  350
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  AAAAATTCCTGAATAGAACAGCAATGGCTTGTACTGT-AGATTGA-AATT  348

seq1  AACAAGTAGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACAC  400
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AACAAGTAGGACCTCATAAAATTGCAAAGC-TCTGTAAGGCAAAAGACAC  397

seq1  TGTCAATAAGATAAAAAGGTCACCAACAGACTGGGAAAGGATCTTTATCA  450
      |||| ||||||| ||||||||| |||||||||||||||||||| ||||||
seq2  TGTC-ATAAGAT-AAAAGGTCA-CAACAGACTGGGAAAGGATC-TTATCA  443

seq1  ATCCTAAATCAGATAGGAGGAATATTCTTAAGACATATTTTCTTATACTG  500
      |||   |||||||||||| ||||| ||| | |||||||||   |||||| 
seq2  ATC--TAATCAGATAGGA-GAATA-TCTAAGGACATATTT--CTATACT-  486

seq1  GGTCATATGACTCCATATTCACACAATAC  529
      |||||||||||||||||||||| ||||||
seq2  GGTCATATGACTCCATATTCAC-CAATAC  514