BAC Information

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BAC

Clone NameB6Ng01-069N19
Chromosome6 (Build37)
Map Location 128,183,967 - 128,311,814
singlet/doubletdoublet
Overlap geneTead4, LOC652986, Tulp3, 5930416I19Rik
Upstream geneEG243642, LOC100043578, EG640703, LOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560
Downstream geneFoxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069N19.bB6Ng01-069N19.g
ACCDH888035DH888036
length1,1461,061
definitionDH888035|Mus musculus domesticus DNA, BAC clone: B6Ng01-069N19, 5' end.DH888036|Mus musculus domesticus DNA, BAC clone: B6Ng01-069N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,183,967 - 128,185,127)(128,310,744 - 128,311,814)
sequence
gaattcaccacgtagaccagcctgcctcctaagtgccaagattaaaggtg
tgtactacagctgcccatcaacaccaattctctttccttccttcatttta
ccctaagcaatacagtcatgaaaacagtgattcggggttgtttgtttttt
tgtttgagatggagtttctctgtgtacccctggctgtcctggattttgct
ctgtagacgagggcctctcgagcactgggattaaaggcgtgtaccagtac
tgcccagaaggatgactcttatgtgagacttcttcacctaccacacaaca
ccgagggaactgccacatggaccagagtgcaggctgtgcactgccaatcc
tgaggcaggttctgagacctactattcttgtgcagaacccaggaaggtct
gggtaggagttgggcgcacgtgacaagcagtcttacaccactaggtgaca
ctcaagtacaagtttttctcctttggcacctcctttctacagcaaaatct
ttgtgtacgctgacaagggagtgttgattatgctgtaattaaggtagtgt
gggagaaatattatacacacacaaagagaggcacatgcacactgctaaga
agggctagccttcaccactatggatgaacgaaacttgctgaaggaggaaa
gcaattatggaacagtacgaagagatattttttggaatgtctctgcacta
tgtatggtttaagtggagccattcattagaaggaagaaaacgcaaacaat
cactgcagcatccgagctgatgtttagcctctgaaacaaacagtcccctc
tactgaacactctctatccccaggatggcttcagactccccactccgtgt
ccatcataatccagtgggaaagggcagctgcagggcgtggagcaggcagg
agagcaacccatgagtcctggaggaagtggtcagccatggctcaagttct
tctggtgacaatgagtgagcaggacctgacccaggctcttcccccacgtt
ctcaagtcatatgagcaacccagagacctagtatgccagactggcctgaa
cgtgagacttatttaatgcttgggactagaacagggcagaatgctgacca
ctcatcaccaagaaactaaaactgtcttgactcccagtggtctgaa
gaattccaggccagccaggtctacattgccagccccaggctagccaaggc
tacataacaagactctatctcaaagattaataaaaataggcaaaggctga
gcagaaacgagccaaaacctgacttcgattttgtttgggtaagagattat
atagctaaaactgagatgggatgtggccctatttcctatttcatggattg
tggattgattgactaaaagcaaactgagccggagaattcacctgcttcct
gtctgctaaggtgatgtgcccagctgctgtcaagttcccgctgctgagac
tcctcaacactgtaccctggatctgtgagccagagcaggcccttctttcc
ttaacttgccttcccagtggggccagcctgtgatcccatcatgtgggagg
tggagactacatagtgcatttgaagccaggggaggctatgcgagaccctg
tctcacaaaagccaaaataattctatgagggctggtctatagccaagagg
tacagttactgcctaatgtgctgaggcctgaggttcagtctgaaagccaa
aaagaatatattcaaaaccatgcaaagtcgggattgctggatgctaagta
catgcgacttaatccgtaactcggttgacatctccttatatgctagagaa
tctgggctgttctttttgttgttgttgtgttgttgtttgtcttttaacaa
aacctagatgtgattacaaacttctatttgaaaacctagtggttactcaa
cccaaccccacagtcatgtggcctcacctggttttcagacccaatgttga
cactatgtctaatattttttgtcattcattctttaaaatgttttttaaat
agggtctcactttgtatccccttactgtcgtggaactcactgtatagacc
aggttgactttcaactcagagaaatctgcctgcctcctgatgctgggttt
aagatggatgttaccacccctagctctttttctttttctttgttagctag
ataggcacgcctcacagaagcgacatgttgtggaggacgaatgcattgga
gggaacatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128183967_128185127
seq2: B6Ng01-069N19.b_47_1192

seq1  GAATTCACCACGTAGACCAGCCTGCCTCCTAAGTGCCAAGATTAAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCACGTAGACCAGCCTGCCTCCTAAGTGCCAAGATTAAAGGTG  50

seq1  TGTACTACAGCTGCCCATCAACACCAATTCTCTTTCCTTCCTTCATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTACAGCTGCCCATCAACACCAATTCTCTTTCCTTCCTTCATTTTA  100

seq1  CCCTAAGCAATACAGTCATGAAAACAGTGATTCGGGGTTGTTTGTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCAATACAGTCATGAAAACAGTGATTCGGGGTTGTTTGTTTTTT  150

seq1  TGTTTGAGATGGAGTTTCTCTGTGTACCCCTGGCTGTCCTGGATTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGATGGAGTTTCTCTGTGTACCCCTGGCTGTCCTGGATTTTGCT  200

seq1  CTGTAGACGAGGGCCTCTCGAGCACTGGGATTAAAGGCGTGTACCAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACGAGGGCCTCTCGAGCACTGGGATTAAAGGCGTGTACCAGTAC  250

seq1  TGCCCAGAAGGATGACTCTTATGTGAGACTTCTTCACCTACCACACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGAAGGATGACTCTTATGTGAGACTTCTTCACCTACCACACAACA  300

seq1  CCGAGGGAACTGCCACATGGACCAGAGTGCAGGCTGTGCACTGCCAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGGAACTGCCACATGGACCAGAGTGCAGGCTGTGCACTGCCAATCC  350

seq1  TGAGGCAGGTTCTGAGACCTACTATTCTTGTGCAGAACCCAGGAAGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGTTCTGAGACCTACTATTCTTGTGCAGAACCCAGGAAGGTCT  400

seq1  GGGTAGGAGTTGGGCGCACGTGACAAGCAGTCTTACACCACTAGGTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAGTTGGGCGCACGTGACAAGCAGTCTTACACCACTAGGTGACA  450

seq1  CTCAAGTACAAGTTTTTCTCCTTTGGCACCTCCTTTCTACAGCAAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTACAAGTTTTTCTCCTTTGGCACCTCCTTTCTACAGCAAAATCT  500

seq1  TTGTGTACGCTGACAAGGGAGTGTTGATTATGCTGTAATTAAGGTAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTACGCTGACAAGGGAGTGTTGATTATGCTGTAATTAAGGTAGTGT  550

seq1  GGGAGAAATATTATACACACACAAAGAGAGGCACATGCACACTGCTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAATATTATACACACACAAAGAGAGGCACATGCACACTGCTAAGA  600

seq1  AGGGCTAGCCTTCACCACTATGGATGAACGAAACTTGCTGAAGGAGGAAA  650
      ||||||||||||||||                 |||||||||||||||||
seq2  AGGGCTAGCCTTCACCNNNNNNNNNNNNNNNNNCTTGCTGAAGGAGGAAA  650

seq1  GCAATTATGGAACAGTACGAAGAGATATTTTTTGGAATGTCTCTGCACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTATGGAACAGTACGAAGAGATATTTTTTGGAATGTCTCTGCACTA  700

seq1  TGTATGGTTTAAGTGGAGCCATTCATTAGAAGGAAGAAAACGCAAACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGTTTAAGTGGAGCCATTCATTAGAAGGAAGAAAACGCAAACAAT  750

seq1  CACTGCAGCATCCGAGCTGATGTTTAGCCTCTGAAACAAACAGTCCCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGCATCCGAGCTGATGTTTAGCCTCTGAAACAAACAGTCCCCTC  800

seq1  TACTGAACACTCTCTATCCCCAGGATGGCTTCAGACTCCCCACTCCGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACACTCTCTATCCCCAGGATGGCTTCAGACTCCCCACTCCGTGT  850

seq1  CCATCATAATCCAGTGGGAAAGGGCAGCTGCAGGGCGTGGAGCAAGGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  CCATCATAATCCAGTGGGAAAGGGCAGCTGCAGGGCGTGGAGC-AGGCA-  898

seq1  GGAGAGCAACCCATGAGTCCTGGAGGAAGTGGGTCAGCCATGGCTCAAGT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAGAGCAACCCATGAGTCCTGGAGGAAGT-GGTCAGCCATGGCTCAAGT  947

seq1  TCTTCTGGTGACAAATGAGGTGAGCAGGGACCTGAACCCAGGCTC-TCCC  999
      |||||||||||| ||||| ||||||| ||||||| |||||||||| ||||
seq2  TCTTCTGGTGAC-AATGA-GTGAGCA-GGACCTG-ACCCAGGCTCTTCCC  993

seq1  CCACGTTCTCAAAGTCATATGAGCAACCCAGGAGACCTAGTATGCCAGAC  1049
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  CCACGTTCTC-AAGTCATATGAGCAACCCA-GAGACCTAGTATGCCAGAC  1041

seq1  TGGCCTGAAAACGTTGAGAGACTTAGTTTATGC-TGTGACTAGAACAGGG  1098
      |||||||  |||||   |||||||| || |||| || |||||||||||||
seq2  TGGCCTG--AACGT---GAGACTTATTTAATGCTTGGGACTAGAACAGGG  1086

seq1  CAGAAATGCTGACCACTCATCAACAAGAAAACAAAACACTGTCATGACTC  1148
      ||| |||||||||||||||||| |||||||  |||  |||||| ||||||
seq2  CAG-AATGCTGACCACTCATCACCAAGAAACTAAA--ACTGTCTTGACTC  1133

seq1  CCAGTGGTCTGAA  1161
      |||||||||||||
seq2  CCAGTGGTCTGAA  1146

seq1: chr6_128310744_128311814
seq2: B6Ng01-069N19.g_71_1131 (reverse)

seq1  GGCATGTGTCCCCTCAAATGCATTCGTCCTCACACACAATGTCACTATCT  50
      ||||  ||| ||||| ||||||||||||||| ||||  ||||| || |||
seq2  GGCA--TGTTCCCTCCAATGCATTCGTCCTC-CACAACATGTCGCT-TCT  46

seq1  GTGAGGCTGTGCCTATCTAGCTAACAAAAGAAAAAAGAAAAAGAGGCTAG  100
      ||||||| ||||||||||||||||||||   ||||||||||||| |||||
seq2  GTGAGGC-GTGCCTATCTAGCTAACAAA--GAAAAAGAAAAAGA-GCTAG  92

seq1  GGGTGGTAACATCCATCTTAAATCCCAGCATTCAGGAGGCAGGCAGATTT  150
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  GGGTGGTAACATCCATCTTAAA-CCCAGCA-TCAGGAGGCAGGCAGATTT  140

seq1  CTCTGAGTTGGAGGTCAACCTGGTCTATACAGTGAGTTCCACGACAGTAA  200
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTGAAAGTCAACCTGGTCTATACAGTGAGTTCCACGACAGTAA  190

seq1  GGGGATACAAAGTGAGACCCTATTTAAAAAACATTTTAAAGAATGAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATACAAAGTGAGACCCTATTTAAAAAACATTTTAAAGAATGAATGA  240

seq1  CAAAAAATATTAGACATAGTGTCAACATTGGGTCTGAAAACCAGGTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATATTAGACATAGTGTCAACATTGGGTCTGAAAACCAGGTGAGG  290

seq1  CCACATGACTGTGGGGTTGGGTTGAGTAACCACTAGGTTTTCAAATAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGACTGTGGGGTTGGGTTGAGTAACCACTAGGTTTTCAAATAGAA  340

seq1  GTTTGTAATCACATCTAGGTTTTGTTAAAAGACAAACAACAACACAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAATCACATCTAGGTTTTGTTAAAAGACAAACAACAACACAACAA  390

seq1  CAACAAAAAGAACAGCCCAGATTCTCTAGCATATAAGGAGATGTCAACCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAAGAACAGCCCAGATTCTCTAGCATATAAGGAGATGTCAACCG  440

seq1  AGTTACGGATTAAGTCGCATGTACTTAGCATCCAGCAATCCCGACTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACGGATTAAGTCGCATGTACTTAGCATCCAGCAATCCCGACTTTGC  490

seq1  ATGGTTTTGAATATATTCTTTTTGGCTTTCAGACTGAACCTCAGGCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTGAATATATTCTTTTTGGCTTTCAGACTGAACCTCAGGCCTCA  540

seq1  GCACATTAGGCAGTAACTGTACCTCTTGGCTATAGACCAGCCCTCATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTAGGCAGTAACTGTACCTCTTGGCTATAGACCAGCCCTCATAGA  590

seq1  ATTATTTTGGCTTTTGTGAGACAGGGTCTCGCATAGCCTCCCCTGGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTGGCTTTTGTGAGACAGGGTCTCGCATAGCCTCCCCTGGCTTC  640

seq1  AAATGCACTATGTAGTCTCCACCTCCCACATGATGGGATCACAGGCTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACTATGTAGTCTCCACCTCCCACATGATGGGATCACAGGCTGGC  690

seq1  CCCACTGGGAAGGCAAGTTAAGGAAAGAAGGGCCTGCTCTGGCTCACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGGGAAGGCAAGTTAAGGAAAGAAGGGCCTGCTCTGGCTCACAGA  740

seq1  TCCAGGGTACAGTGTTGAGGAGTCTCAGCAGCGGGAACTTGACAGCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGTACAGTGTTGAGGAGTCTCAGCAGCGGGAACTTGACAGCAGCT  790

seq1  GGGCACATCACCTTAGCAGACAGGAAGCAGGTGAATTCTCCGGCTCAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACATCACCTTAGCAGACAGGAAGCAGGTGAATTCTCCGGCTCAGTT  840

seq1  TGCTTTTAGTCAATCAATCCACAATCCATGAAATAGGAAATAGGGCCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAGTCAATCAATCCACAATCCATGAAATAGGAAATAGGGCCACA  890

seq1  TCCCATCTCAGTTTTAGCTATATAATCTCTTACCCAAACAAAATCGAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTCAGTTTTAGCTATATAATCTCTTACCCAAACAAAATCGAAGT  940

seq1  CAGGTTTTGGCTCGTTTCTGCTCAGCCTTTGCCTATTTTTATTAATCTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTTGGCTCGTTTCTGCTCAGCCTTTGCCTATTTTTATTAATCTTT  990

seq1  GAGATAGAGTCTTGTTATGTAGCCTTGGCTAGCCTGGGGCTGGCAATGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGAGTCTTGTTATGTAGCCTTGGCTAGCCTGGGGCTGGCAATGTA  1040

seq1  GACCTGGCTGGCCTGGAATTC  1071
      |||||||||||||||||||||
seq2  GACCTGGCTGGCCTGGAATTC  1061