BAC Information

Click to search

BAC

Clone NameB6Ng01-069P17
Chromosome6 (Build37)
Map Location 133,175,580 - 133,176,658
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
Downstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069P17.bB6Ng01-069P17.g
ACCDH888124DH888125
length1,0731,234
definitionDH888124|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P17, 5' end.DH888125|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgctggaagcttggttgtaaaggtggcaatgctgaaataaat
aagggaaaggacaacctttccaataggggctaaacccttaaaggaagtaa
atccttcctttacaagaagtcaaaaattcctaataggtctacagatagga
atggaatttcatgtccaactcttgtctccatgctgatatcagtcactaaa
gtccttattggaactagaaactaatgaatgccctttttctttattaattt
tattaattaatgattttatgtttactcttcattgtactttgttttattat
tttatttcttccttacttgttttcttgagacaagggctcatatattccaa
gatggccactatgtatctgcatatgtccctacatgtttaatctatgtcct
ctatattcatactgctaagattacaatgaaattctgacagatattttatt
gtttctgatatttgcaaaatgcttagtcaatacctttacacaaaaatgct
tcccagaacatcagaacctcgtcaattcactccctcctaactcaggctga
gctgttctctcacttttcactctggtaaacctcatttcagtttccagcca
cactggagagtagggatttgaagtatgggctagtttccacatttggcaca
tttaatgtccttgttagtcttgtaaaagagaagtacaggtggtcctctgc
agacttgaggtttgatgtttgcaaattacatcaggcaaaatttgaaaacg
gagtctgaagatgaagcaagaaccagaagtggtctcaagtctgcttacaa
aggaccacgtggctttgagagggggataaataagaaaagtcattgaaggg
aataatgataccaaacctctgtgggtaagaaaatttcttccaggaagagg
agataatgaagttaatgtcacatagattttcaaagagaccatacccttgt
aatatcaactgaaatgatttttatactgcctaaatgtgactaacagagaa
aatatgaaaacatgacatggtctgaccaataccccaaatgatattgtttt
ggtaccagcatcttgaaagtgac
gaattcaatgaaaatgaaggtacaccatactcaaattcatgggatattat
gaaagcactgctaagagaaaagtagataggattaagtgcctccataaaga
aattagaattttctcataccaggagtttaaaagtacaactgaaagctcta
gaatagaaagacacaagttcacctaagagtagtagaaggcaggaaatatt
aaaaatcaagggtcaaatcaattagttaagaacaaagaaaacaatacaaa
aaatcacaaaagtaaagagctggttacttgagaaaatcaataagaaagag
aaacctttagccaaactaactggaagaagagagatagtacgaaaataaac
aataatagaaatgaaaagggagataaaacaacaaaacaacaaggaaaatc
aagaatcattagttcttacttcaaaaacctatatataacaaagttggaaa
atcttaatgatatggacaattttctggcagttatcacttaccaatattaa
attgagatcaggtaagagattttaactgcctatatctcctaaaggaaaag
agatagtcattatatgtcttccaatgcctgtccctctaaaaaaaaaaaaa
aaaaaaaggccaggacaaagtggttttagggcagaaatctaccagacttt
caaagaagagctaatcctcaaagtattccccaaattagaaacagtagaaa
cactgcagaactcattttatgaagctacaatcctcctaatacctaaacca
agcaaaggtccaaccaaaaaagaatacttcaggctgacttctcatatgaa
tattgatgtaaaaatactcaatattgtagccaccaacccaatcgaggaac
acatcaaaaatgtcatccaacatgatcaattagtctttcatcaaagtaat
gggaagattgttaaatatacaaaaatccatcaaggtaatgtactatataa
gcaaacagaaaaagttgacctgatcatctaattggatgctgaaaagcatt
tcacaattccaacacctttcatattaagtgtagagggatcaggaaacaat
cccatacctaaacccattcaagcagtatcagagcagtagtccgcatcacc
taatggaggaatagcagtccactaattcagttcaagacaagatgccatcc
ttcccttatcaattagacttgaagttagctgcaccatagacaacttaatg
aaatgcaggggatcacaatggagaaaacctacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133175580_133176658
seq2: B6Ng01-069P17.b_45_1117

seq1  GAATTCTATGCTGGAAGCTTGGTTGTAAAGGTGGCAATGCTGAAATAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCTGGAAGCTTGGTTGTAAAGGTGGCAATGCTGAAATAAAT  50

seq1  AAGGGAAAGGACAACCTTTCCAATAGGGGCTAAACCCTTAAAGGAAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAGGACAACCTTTCCAATAGGGGCTAAACCCTTAAAGGAAGTAA  100

seq1  ATCCTTCCTTTACAAGAAGTCAAAAATTCCTAATAGGTCTACAGATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCCTTTACAAGAAGTCAAAAATTCCTAATAGGTCTACAGATAGGA  150

seq1  ATGGAATTTCATGTCCAACTCTTGTCTCCATGCTGATATCAGTCACTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATTTCATGTCCAACTCTTGTCTCCATGCTGATATCAGTCACTAAA  200

seq1  GTCCTTATTGGAACTAGAAACTAATGAATGCCCTTTTTCTTTATTAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTATTGGAACTAGAAACTAATGAATGCCCTTTTTCTTTATTAATTT  250

seq1  TATTAATTAATGATTTTATGTTTACTCTTCATTGTACTTTGTTTTATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTAATGATTTTATGTTTACTCTTCATTGTACTTTGTTTTATTAT  300

seq1  TTTATTTCTTCCTTACTTGTTTTCTTGAGACAAGGGCTCATATATTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTTCCTTACTTGTTTTCTTGAGACAAGGGCTCATATATTCCAA  350

seq1  GATGGCCACTATGTATCTGCATATGTCCCTACATGTTTAATCTATGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCACTATGTATCTGCATATGTCCCTACATGTTTAATCTATGTCCT  400

seq1  CTATATTCATACTGCTAAGATTACAATGAAATTCTGACAGATATTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTCATACTGCTAAGATTACAATGAAATTCTGACAGATATTTTATT  450

seq1  GTTTCTGATATTTGCAAAATGCTTAGTCAATACCTTTACACAAAAATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGATATTTGCAAAATGCTTAGTCAATACCTTTACACAAAAATGCT  500

seq1  TCCCAGAACATCAGAACCTCGTCAATTCACTCCCTCCTAACTCAGGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAACATCAGAACCTCGTCAATTCACTCCCTCCTAACTCAGGCTGA  550

seq1  GCTGTTCTCTCACTTTTCACTCTGGTAAACCTCATTTCAGTTTCCAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTCTCACTTTTCACTCTGGTAAACCTCATTTCAGTTTCCAGCCA  600

seq1  CACTGGAGAGTAGGGATTTGAAGTATGGGCTAGTTTCCACATTTGGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGAGTAGGGATTTGAAGTATGGGCTAGTTTCCACATTTGGCACA  650

seq1  TTTAATGTCCTTGTTAGTCTTGTAAAAGAGAAGTACAGGTGGTCCTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTCCTTGTTAGTCTTGTAAAAGAGAAGTACAGGTGGTCCTCTGC  700

seq1  AGACTTGAGGTTTGATGTTTGCAAATTACATCAGGCAAAATTTGAAAACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAGGTTTGATGTTTGCAAATTACATCAGGCAAAATTTGAAAACG  750

seq1  GAGTCTGAAGATGAAGCAAGAACCAGAAGTGGTCTCAAGTCTGCTTACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGAAGATGAAGCAAGAACCAGAAGTGGTCTCAAGTCTGCTTACAA  800

seq1  AGGACCACGTGGCTTTGAGAGGGGGATAAATAAGAAAAGTCATTGAAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACGTGGCTTTGAGAGGGGGATAAATAAGAAAAGTCATTGAAGGG  850

seq1  AATAATGATACCAAACCTCTGTGGGTAAGAAAATTTCTTCCAGGAAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGATACCAAACCTCTGTGGGTAAGAAAATTTCTTCCAGGAAGAGG  900

seq1  AGATAATGAAGTTAATGTCACATAGATTTTCAAAGAGACCATACCCTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGATAATGAAGTTAATGTCACATAGATTTTCAAAGAGACCATACCCTTG-  949

seq1  TAATATCAACTGAAATGATTTTTATTACTGCCTAAAATGTGACTAACAGA  1000
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TAATATCAACTGAAATGATTTTTA-TACTGCCT-AAATGTGACTAACAGA  997

seq1  GAAAATATGAAAACATGACATGGTCTGACCAATACCCCAAATGATATTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATGAAAACATGACATGGTCTGACCAATACCCCAAATGATATTGT  1047

seq1  GTATGGTACCAGCATCTTGGAAAAGTGAC  1079
       | ||||||||||||||||  ||||||||
seq2  -TTTGGTACCAGCATCTTG--AAAGTGAC  1073