BAC Information

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BAC

Clone NameB6Ng01-072E24
Chromosome6 (Build37)
Map Location 129,862,152 - 130,050,292
singlet/doubletdoublet
Overlap geneKlra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769
Upstream geneClec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17
Downstream geneLOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072E24.bB6Ng01-072E24.g
ACCDH889765DH889766
length1,1461,146
definitionDH889765|Mus musculus domesticus DNA, BAC clone: B6Ng01-072E24, 5' end.DH889766|Mus musculus domesticus DNA, BAC clone: B6Ng01-072E24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,862,152 - 129,863,312)(130,049,126 - 130,050,292)
sequence
gaattcaaacagataagttcctaatgagtagggaaaaaagaaaaatgtgg
tatagtctatcttatctgagactcctggatcaaagtcatcacaaatgctt
tgtaacttttagtaactgcagcaaacagaaaagtcataaagggccattgc
cagctagggtgtaggagcaacagagagagaggtatagaggatacaatgtg
aatttttaatctcacataattccatgtacatgatcatgtcacatataata
aataagcacatgatgttgtaagaggaggctatatgaaaataaattttgcc
tctatgcagtacatattagctaaagtacatagataccatctgataataga
catcaatgtatttgtaaatagtatttataactgacattacccttacatta
ataactaagctgagggccagcagataacaaatacaagatatacatgtgag
aacattcttaactagtttttcaatttattaagttttcagaattgattcac
aatttgctttgacaaagaatcattctgtcatagaattctttttcaaaatt
cttatttattatcattgctctttggctgggtaaactgaggtacacatgtc
cagaagacaattttactaagtgaatcctcccactccacattcatgtgaag
tccagggatcaaactaggtggtcagtcagccttatgtagcaagtacattt
acacactgacccgttttacctggatcctattattacatctttcagatgga
taatatataaacatttgatgcagttatagagtaatgaactttagagatcc
ctctactttaatttcttagcacacaagtcacagtatactcctaagaaaac
aattagtgcagaataaccgttgtcacatgctgccagagttaaccagatct
aacacaacccagtgtgcttccccatcatccagatctcatatcacacccct
tgaattctcttgattatatttgatcatttagtagaaaaagcagttatttt
tacctgtgtctctaccggagtgattctggtggagggaaagtgggggaaag
tggcgttttctgtttatatcccttacgagtttcaaaatgaaggacggact
aatttccactagtgaactcaacctctgattttctgcccctctcttt
gaattctcatcaaaaaccaaacggcaaaatttacagaagaaaaatcacct
catctaatctataaaatcagtagtgaatattttcatggcaactggaagat
tgtaaatgaactagatgccatgtaataatctatattagagtttttaaaat
atatttctccttgaatcccatgacttaatgcataaaatatatctcttagg
attttctaaagtacgttccatgtacttttaaaagtaaaaacaacaaaata
ctataaaacaactagaatgttaaatagttgagcattttctaattgctttc
tgttttatggaagtgattaataaatacacattgctttaatcatcttgagg
tcattatatataaaattaagaactgcttactatttactagaaaaattaat
atcagaaatatggagttaattgatgcagaattgtatagctctaatggaaa
gacagaaaagaatgaggtcagaggactgtgagtgtgacatcagcttgtga
gagcaaggtacaaaaactgtctccaaacaaaaacaacaacaaccacaaaa
acaaaccaaaaactaaacaccagaagaaaaccaaaatgaagccttaatct
gtagcctagggaaagagtatttgctgatcatgtccatttccttagatttg
atattccagcaccatgaaaaccccagcaggagaccactctgtgtggaatg
acttggatgttcacagtctatattacctatgattaaaaagcttgaatagt
gtaaaggaacacttttccaggggaatgtgttctaacagcatttctaatac
ataattagatgcaattagcatgatttaaaaccaagaagtattaaaataga
agcataagagatttccagcactaaattaaaaaattagagcacgggatctc
ccattctcatggattggcaggatcattatagtaaaatggctatctggcca
gagcatgctacagattcatgcatccccatcaaatcccactcaatcttcac
aaattagaaagagtgatctgcaatcatctggaataacaaaaaacatagga
tagcaaaactcttctcaaggataaagaacctctggtgaataccatgcttg
acctaggcagtatacgagcacatcccatggagagttacagagacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129862152_129863312
seq2: B6Ng01-072E24.b_42_1187

seq1  GAATTCAAACAGATAAGTTCCTAATGAGTAGGGAAAAAAGAAAAATGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGATAAGTTCCTAATGAGTAGGGAAAAAAGAAAAATGTGG  50

seq1  TATAGTCTATCTTATCTGAGACTCCTGGATCAAAGTCATCACAAATGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTATCTTATCTGAGACTCCTGGATCAAAGTCATCACAAATGCTT  100

seq1  TGTAACTTTTAGTAACTGCAGCAAACAGAAAAGTCATAAAGGGCCATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTTTAGTAACTGCAGCAAACAGAAAAGTCATAAAGGGCCATTGC  150

seq1  CAGCTAGGGTGTAGGAGCAACAGAGAGAGAGGTATAGAGGATACAATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGGGTGTAGGAGCAACAGAGAGAGAGGTATAGAGGATACAATGTG  200

seq1  AATTTTTAATCTCACATAATTCCATGTACATGATCATGTCACATATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAATCTCACATAATTCCATGTACATGATCATGTCACATATAATA  250

seq1  AATAAGCACATGATGTTGTAAGAGGAGGCTATATGAAAATAAATTTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCACATGATGTTGTAAGAGGAGGCTATATGAAAATAAATTTTGCC  300

seq1  TCTATGCAGTACATATTAGCTAAAGTACATAGATACCATCTGATAATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCAGTACATATTAGCTAAAGTACATAGATACCATCTGATAATAGA  350

seq1  CATCAATGTATTTGTAAATAGTATTTATAACTGACATTACCCTTACATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGTATTTGTAAATAGTATTTATAACTGACATTACCCTTACATTA  400

seq1  ATAACTAAGCTGAGGGCCAGCAGATAACAAATACAAGATATACATGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAAGCTGAGGGCCAGCAGATAACAAATACAAGATATACATGTGAG  450

seq1  AACATTCTTAACTAGTTTTTCAATTTATTAAGTTTTCAGAATTGATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTTAACTAGTTTTTCAATTTATTAAGTTTTCAGAATTGATTCAC  500

seq1  AATTTGCTTTGACAAAGAATCATTCTGTCATAGAATTCTTTTTCAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTTTGACAAAGAATCATTCTGTCATAGAATTCTTTTTCAAAATT  550

seq1  CTTATTTATTATCATTGCTCTTTGGCTGGGTAAACTGAGGTACACATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATTATCATTGCTCTTTGGCTGGGTAAACTGAGGTACACATGTC  600

seq1  CAGAAGACAATTTTACTAAGTGAATCCTCCCACTCCACATTCATGTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACAATTTTACTAAGTGAATCCTCCCACTCCACATTCATGTGAAG  650

seq1  TCCAGGGATCAAACTAGGTGGTCAGTCAGCCTTATGTAGCAAGTACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGATCAAACTAGGTGGTCAGTCAGCCTTATGTAGCAAGTACATTT  700

seq1  ACACACTGACCCGTTTTACCTGGATCCTATTATTACATCTTTCAGATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGACCCGTTTTACCTGGATCCTATTATTACATCTTTCAGATGGA  750

seq1  TAATATATAAACATTTGATGCAGTTATAGAGTAATGAACTTTAGAGATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATAAACATTTGATGCAGTTATAGAGTAATGAACTTTAGAGATCC  800

seq1  CTCTACTTTAATTTCTTAGCACACAAGTCACAGTATACTCCTAAGAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTTTAATTTCTTAGCACACAAGTCACAGTATACTCCTAAGAAAAC  850

seq1  AATTAGTGCAGAATAACCGTTGTCACATGCTGCCAGAGTTAACCAGATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTGCAGAATAACCGTTGTCACATGCTGCCAGAGTTAACCAGATCT  900

seq1  AACACAACCCAGTGTGCTTCCCCATCAATCCAGATCTCATATCACACCCC  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACACAACCCAGTGTGCTTCCCCATC-ATCCAGATCTCATATCACACCCC  949

seq1  TTGAAATTCTCTTGATTATATTTGATCATTTAGTAGAAAAAAGCAGTTAT  1000
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTG-AATTCTCTTGATTATATTTGATCATTTAGTAG-AAAAAGCAGTTAT  997

seq1  TTTTACCTGTGTCTCTACCGGAGTGATTCTGGTGGAGGGAAAAGTTGGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||   |||| 
seq2  TTTTACCTGTGTCTCTACCGGAGTGATTCTGGTGGAGGGAAA--GTGGGG  1045

seq1  GAAAAGTTGGCGTTTTCTGGTCTATATCCCCTACGAGTTTCAAAAATGAA  1100
      ||||   ||||||||||| || |||||||| |||||||||| ||||||||
seq2  GAAA--GTGGCGTTTTCT-GTTTATATCCCTTACGAGTTTC-AAAATGAA  1091

seq1  AGACGGAACTAAATTTCCACCTAGTGATACTCAACCTCATGATTTTCTGC  1150
       ||||| ||| |||||||| ||||||| |||||||||| |||||||||||
seq2  GGACGG-ACT-AATTTCCA-CTAGTGA-ACTCAACCTC-TGATTTTCTGC  1136

seq1  CCCTCCTCTTT  1161
      |||| ||||||
seq2  CCCT-CTCTTT  1146

seq1: chr6_130049126_130050292
seq2: B6Ng01-072E24.g_66_1211 (reverse)

seq1  TTGTCTCTGTAACTCCTTCCATGGGTGTTGCTCTGTATTACTGCTTTAGG  50
      |||||||||||||||  ||||||||   ||||| ||| ||||||  ||||
seq2  TTGTCTCTGTAACTC--TCCATGGGATGTGCTC-GTA-TACTGC-CTAGG  45

seq1  TCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTT  100
      ||| ||||||| ||| |||||||||||| ||||||||||||||||| |||
seq2  TCAAGCATGGT-ATT-CACCAGAGGTTC-TTTATCCTTGAGAAGAG-TTT  91

seq1  TGCTATCCTATGTTTTTTGTTATTCCAGATGAATTTGCAGATCACTCTTT  150
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  TGCTATCCTATGTTTTTTGTTATTCCAGATGA--TTGCAGATCACTCTTT  139

seq1  CTAATTTGTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAAT  200
      |||||||| ||||| ||||||| |||  ||||||||||| |||| |||||
seq2  CTAATTTG-TGAAG-ATTGAGTGGGA--TTTGATGGGGA-TGCA-TGAAT  183

seq1  CTGTAGCATGCTTCTGGCCAGATAGCCATTTTTACTATAATGATCCTGCC  250
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  CTGTAGCATGC-TCTGGCCAGATAGCCA-TTTTACTATAATGATCCTGCC  231

seq1  AATCCATGAGAATGGGAGATCCCGTGCTCCTAATTTTTTAATTTAGTGCT  300
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATCCATGAGAATGGGAGATCCCGTGCT-CTAATTTTTTAATTTAGTGCT  280

seq1  GGAAATCTCTTATGCTTCTATTTTTAATACTTCTTGGTTTTAAATCATGC  350
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGAAATCTCTTATGCTTCTA-TTTTAATACTTCTTGGTTTTAAATCATGC  329

seq1  TAATTGCATCTAATTATGTATTAGAAATGCTGTTAGAACACATTCCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCATCTAATTATGTATTAGAAATGCTGTTAGAACACATTCCCCTG  379

seq1  GAAAAGTGTTCCTTTACACTATTCAAGCTTTTTAATCATAGGTAATATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGTTCCTTTACACTATTCAAGCTTTTTAATCATAGGTAATATAG  429

seq1  ACTGTGAACATCCAAGTCATTCCACACAGAGTGGTCTCCTGCTGGGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAACATCCAAGTCATTCCACACAGAGTGGTCTCCTGCTGGGGTTT  479

seq1  TCATGGTGCTGGAATATCAAATCTAAGGAAATGGACATGATCAGCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGCTGGAATATCAAATCTAAGGAAATGGACATGATCAGCAAATA  529

seq1  CTCTTTCCCTAGGCTACAGATTAAGGCTTCATTTTGGTTTTCTTCTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCCTAGGCTACAGATTAAGGCTTCATTTTGGTTTTCTTCTGGTG  579

seq1  TTTAGTTTTTGGTTTGTTTTTGTGGTTGTTGTTGTTTTTGTTTGGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTTGGTTTGTTTTTGTGGTTGTTGTTGTTTTTGTTTGGAGACA  629

seq1  GTTTTTGTACCTTGCTCTCACAAGCTGATGTCACACTCACAGTCCTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTACCTTGCTCTCACAAGCTGATGTCACACTCACAGTCCTCTGA  679

seq1  CCTCATTCTTTTCTGTCTTTCCATTAGAGCTATACAATTCTGCATCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCTTTTCTGTCTTTCCATTAGAGCTATACAATTCTGCATCAATT  729

seq1  AACTCCATATTTCTGATATTAATTTTTCTAGTAAATAGTAAGCAGTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATATTTCTGATATTAATTTTTCTAGTAAATAGTAAGCAGTTCTT  779

seq1  AATTTTATATATAATGACCTCAAGATGATTAAAGCAATGTGTATTTATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATATATAATGACCTCAAGATGATTAAAGCAATGTGTATTTATTA  829

seq1  ATCACTTCCATAAAACAGAAAGCAATTAGAAAATGCTCAACTATTTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTCCATAAAACAGAAAGCAATTAGAAAATGCTCAACTATTTAACA  879

seq1  TTCTAGTTGTTTTATAGTATTTTGTTGTTTTTACTTTTAAAAGTACATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTGTTTTATAGTATTTTGTTGTTTTTACTTTTAAAAGTACATGG  929

seq1  AACGTACTTTAGAAAATCCTAAGAGATATATTTTATGCATTAAGTCATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTACTTTAGAAAATCCTAAGAGATATATTTTATGCATTAAGTCATGG  979

seq1  GATTCAAGGAGAAATATATTTTAAAAACTCTAATATAGATTATTACATGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAGGAGAAATATATTTTAAAAACTCTAATATAGATTATTACATGG  1029

seq1  CATCTAGTTCATTTACAATCTTCCAGTTGCCATGAAAATATTCACTACTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGTTCATTTACAATCTTCCAGTTGCCATGAAAATATTCACTACTG  1079

seq1  ATTTTATAGATTAGATGAGGTGATTTTTCTTCTGTAAATTTTGCCGTTTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAGATTAGATGAGGTGATTTTTCTTCTGTAAATTTTGCCGTTTG  1129

seq1  GTTTTTGATGAGAATTC  1167
      |||||||||||||||||
seq2  GTTTTTGATGAGAATTC  1146