BAC Information

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BAC

Clone NameB6Ng01-072K21
Chromosome6 (Build37)
Map Location 24,274,496 - 24,275,726
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps2, Rnf133, Rnf148, Tas2r118, LOC100041082, Slc13a1
Downstream geneLOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072K21.bB6Ng01-072K21.g
ACCDH890028DH890029
length1,1701,214
definitionDH890028|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K21, 5' end.DH890029|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccacaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgccccttcttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
atagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacccta
taggtggatcaacattatgactaccagtaccccggagctcttgactctag
ctgcatatgtatcaaaagatggcctagtcggccatcactgaaagagagcc
catggacacaactttaattgcccaaaactgggaacgctaggccaaaaggg
ggatgtggcggaggggaagt
gaattcaagaatctcaaagcacaattgctttagcagtcctttcaactact
aaaaacaagtctgcaaagcaaaagaacaaaaaacaaaacaagtgctgtca
agtgcctattaccgggccttctagtgcaacagtacaccaataggcaaaca
gtaaagaactgtcttaatagattcttaaagaaataaagtttcccaaattc
aagcatatcttctcttccaaaagactgataaatctgagatgaaaccaagt
cgcagacacagaaggaatctagactcttgtctatttatttacaaatatgt
actgttcctaagccatatggtttgaacaaagacatcaaaacgtgaaaaca
acagcaggtctcaggcatagctgccgtagagacagctcagtttccaggtc
tggactgttctcacagaaacatccactcacattctgttcagtcaacagca
cttctgttttccaaatatatctatagaaatctccccttttccttgtggga
gaactaaatgaatgctttgaacattcactcctaaaagttagccttccctg
tacaagtgatctttacatctttacatttacagtggtgacttaaatagtgt
ttcaactatgagagcacaccagccacatggtctccatcatttctgatgtc
tccacattacctcatttcagcatctctgatgtcctctgcttccacccagc
tatctcaagatctcttcttatcccacacttactgctgacatccagtctgt
cattaacaatatcctgaaggttcctttgttcacctcagatggaactaggg
tgctgacaaagtgtcaggacccttactcttagtgtcacatccccatggaa
actggagcttgttatcctgggctgcttcctggaactattccaggagctgg
gacctggagcctttaggaacctcagctcttcacagctcctcagattctgt
agcctcagctctctgctgtttcttggcttctgccacttctcatctgtaga
tgcagctttgtagttccctggacacactttagaatcctcagccatcttct
agatgctgcattctaagtacaattgggggggggggttccttcccaggggt
ttgaaccttttttttaccagctcagccattcttactagtttatgtagatt
caagtggtttacaatatataccactgaaggcttatgagcctaggctgcat
cgggagtgagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24274496_24275726
seq2: B6Ng01-072K21.g_69_1282

seq1  GAATTCAAGAATCTCAAAGCACAATTGCTTTAGCAGTCCTTTCAACTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAATCTCAAAGCACAATTGCTTTAGCAGTCCTTTCAACTACT  50

seq1  AAAAACAAGTCTGCAAAGCAAAAGAACAAAAAACAAAACAAGTGCTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAGTCTGCAAAGCAAAAGAACAAAAAACAAAACAAGTGCTGTCA  100

seq1  AGTGCCTATTACCGGGCCTTCTAGTGCAACAGTACACCAATAGGCAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTATTACCGGGCCTTCTAGTGCAACAGTACACCAATAGGCAAACA  150

seq1  GTAAAGAACTGTCTTAATAGATTCTTAAAGAAATAAAGTTTCCCAAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAACTGTCTTAATAGATTCTTAAAGAAATAAAGTTTCCCAAATTC  200

seq1  AAGCATATCTTCTCTTCCAAAAGACTGATAAATCTGAGATGAAACCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATCTTCTCTTCCAAAAGACTGATAAATCTGAGATGAAACCAAGT  250

seq1  CGCAGACACAGAAGGAATCTAGACTCTTGTCTATTTATTTACAAATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGACACAGAAGGAATCTAGACTCTTGTCTATTTATTTACAAATATGT  300

seq1  ACTGTTCCTAAGCCATATGGTTTGAACAAAGACATCAAAACGTGAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCCTAAGCCATATGGTTTGAACAAAGACATCAAAACGTGAAAACA  350

seq1  ACAGCAGGTCTCAGGCATAGCTGCCGTAGAGACAGCTCAGTTTCCAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGTCTCAGGCATAGCTGCCGTAGAGACAGCTCAGTTTCCAGGTC  400

seq1  TGGACTGTTCTCACAGAAACATCCACTCACATTCTGTTCAGTCAACAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTTCTCACAGAAACATCCACTCACATTCTGTTCAGTCAACAGCA  450

seq1  CTTCTGTTTTCCAAATATATCTATAGAAATCTCCCCTTTTCCTTGTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTTTCCAAATATATCTATAGAAATCTCCCCTTTTCCTTGTGGGA  500

seq1  GAACTAAATGAATGCTTTGAACATTCACTCCTAAAAGTTAGCCTTCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAATGAATGCTTTGAACATTCACTCCTAAAAGTTAGCCTTCCCTG  550

seq1  TACAAGTGATCTTTACATCTTTACATTTACAGTGGTGACTTAAATAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTGATCTTTACATCTTTACATTTACAGTGGTGACTTAAATAGTGT  600

seq1  TTCAACTATGAGAGCACACCAGCCACATGGTCTCCATCATTTCTGATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTATGAGAGCACACCAGCCACATGGTCTCCATCATTTCTGATGTC  650

seq1  TCCACATTACCTCATTTCAGCATCTCTGATGTCCTCTGCTTCCACCCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTACCTCATTTCAGCATCTCTGATGTCCTCTGCTTCCACCCAGC  700

seq1  TATCTCAGGATCTCTTCTTATCCCACACTTACTGCTGACATCCAGTCTGT  750
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAAGATCTCTTCTTATCCCACACTTACTGCTGACATCCAGTCTGT  750

seq1  CATTAACAATATCCTGAAGGTTCCTTTGTTCACCTCAGATGGAACTAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACAATATCCTGAAGGTTCCTTTGTTCACCTCAGATGGAACTAGGG  800

seq1  TGCTGACAAAGTGTCAGGACCCTTACTCTTAGTGTCACATCCCCATGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACAAAGTGTCAGGACCCTTACTCTTAGTGTCACATCCCCATGGAA  850

seq1  ACTGGAGCTTGTTATCCTGGGCTGCTTCCTGGAACTATTCCAGGAGCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGCTTGTTATCCTGGGCTGCTTCCTGGAACTATTCCAGGAGCTGG  900

seq1  GACCTGGAGCCTTTTAGGAACCTCAGCTCTTCACAGCTCCTCAGATTCTG  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGAGCC-TTTAGGAACCTCAGCTCTTCACAGCTCCTCAGATTCTG  949

seq1  TAGCCTCAGCTCTCTGCTGTTTCTTGGCTTCTTGCCACTTCTTCAATCTG  1000
      ||||||||||||||||||||||||||||||| ||||||||||   |||| 
seq2  TAGCCTCAGCTCTCTGCTGTTTCTTGGCTTC-TGCCACTTCT--CATCT-  995

seq1  GTAGAAGGCAGCTCTGTTAGTTCCCTGGACACACTTTAGAATCCTTCAGC  1050
      |||| | |||||| || ||||||||||||||||||||||||||| |||||
seq2  GTAG-ATGCAGCTTTG-TAGTTCCCTGGACACACTTTAGAATCC-TCAGC  1042

seq1  CATCTTCTAGATGCTGCA-TCTAAGTACAATTGGGGGGGGGG--TTCTTC  1097
      |||||||||||||||||| |||||||||||||||||||||||  | ||||
seq2  CATCTTCTAGATGCTGCATTCTAAGTACAATTGGGGGGGGGGGTTCCTTC  1092

seq1  ACAGGGGTTTTTTGACCTTTTTGTTACCAGCTCAGCCAATTCTACTAG-T  1146
       ||||||  |||  |||||||| ||||||||||||||| |  |||||| |
seq2  CCAGGGG--TTTGAACCTTTTTTTTACCAGCTCAGCCATTCTTACTAGTT  1140

seq1  AATGAAGGATTCAAGTTGATTAAATAAATAAATAAACAACAGAAAAGGCT  1196
       ||| | ||||||||| | ||| |     | ||| || || |  ||||||
seq2  TATGTA-GATTCAAGTGGTTTACA-----ATATATACCACTG--AAGGCT  1182

seq1  TTATTGAGGCCTAGGCTGCAACGGAAGTGAGGGGA  1231
      |   ||| |||||||||||| ||| ||||||||||
seq2  T--ATGA-GCCTAGGCTGCATCGGGAGTGAGGGGA  1214