BAC Information

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BAC

Clone NameB6Ng01-073C05
Chromosome6 (Build37)
Map Location 126,838,616 - 126,968,969
singlet/doubletdoublet
Overlap geneDyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6
Upstream geneTmem16b, Ntf3, LOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3
Downstream geneFgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642, LOC100043578, EG640703, LOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073C05.bB6Ng01-073C05.g
ACCDH890358DH890359
length1,0681,129
definitionDH890358|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C05, 5' end.DH890359|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,838,616 - 126,839,688)(126,967,840 - 126,968,969)
sequence
gaattcagtcccctaaatctaaagaccatagataggtattatgggacctt
ttggagctggaaaattgaggacttgaacctcagggtggtgaataaatcaa
tctagttccttatttatttatttatttatttatttatttatttatttatt
tatttttaatgaggctccagttatggcagcatctatcttgaaaaatcttt
gatcacaaaaacataatcccagaacttaagagtttccaagaagaaattag
ccacatttggggatgaagaagggagagtgagaccaaagaggaatggtcac
ccatctgtgcgttaggctgggttttgaagcagctctttatactttgttcc
aagctgctgctttgaattgacaaccatcactcattccgcaatcatctgct
gctttctatttctggtatcaggttctgtgttatgtcctggggacataatg
aggagaaatggtccctgttctggggaagaaattgtagtctagtgggtggc
agagatctaaggaacaatttatagccaggcacagtggtgcatgctggtag
ttccagcaattgagcaagtagaaacaagaggatcaggagttcaaggccag
cctcagctaggtgtggtgcttgaggacagcatgagttatatgaaaccttg
gctcaaaaacaaaacaaaacaacaaaacaaaccaaaaaaaacccaaagaa
gcaattactaaataagacaaccagtgtatctgtagagctatgtatataat
gccagccaggctgagaattgaatggagaccatctggttttttgtgtgcca
cacctaggagtccatcatattttgaatttgcaaatctgcatattttgaat
atgtaaatttgcatatttgaatatgcaaagtgtgatttcctttgagatga
gcttacctttgcacatcatgatgggtctttccagcatgactgtgcatgac
ttacctccgataagatttactggcgtgtggaggcacaagttagaaagcca
gctctagttccttcatatgtaatcagcataactatttgggggaaaggatc
taaggaaggtccctgtat
gaattcttttctaattgataaaatatgttaattcaggtggcagaagtaag
tgattatataatttgggtttctagcagatttgcctgctaaaatgcccatt
cagagtcctagccagctgtcccagatctccctgcggagggattctgggta
ccactggggctggcgataagaagctctttggaggaccccactctacagaa
ggagcgagcagccaattccaccccagtctcaggttgttcttaccctgaca
ctttctcagagactggtacaaatggcatctgagaattccctgtctagacc
acatcttctgctgttctggaggctggattaactttaggcagagctgacta
gattccttgttctccataggccatacagcctggtagcacccacacctacc
tgagcataacaaacaaaccaaccaaccaaacaaaacacacacacacacac
acacacacacacacacacacacacacacacacgaaacaccaaaccctcag
aacctaaaaaccccagaccaaaaaaacaaaaaacaaaacaaaacaaaaaa
ccaaaaaccctgaactctgagtcggaccgattgactgtcttcatcccagc
cctctgagcctctgaagcaggtcctaaaattccatgcatctagcagatta
caaagtgatgggtgcacaggagcgcccacagaacggtactggagaagcaa
tggttttagctcacactattaagccaactttgagacactttgctcaaaaa
gttggggaagtagacaccctctgactagctcactttagtctttttccaga
tatcctttgctgagagatttctctgggggacctagcacttgtccccggtc
agctcttccctttctatcccctatcttgttcccccagtgactggagaatc
agactctatgctctcttctagtgcatctgaggttccttttctcttagcca
ctgcccttctcatgtttggtgctaggggccgaacttccctgcgttccaca
catatgagtcctaccactttactagatccagcttcttacctctggtctta
gaattaaaaattttcatagacttgctttccgacacattgaattaggccct
gttgctgcccaagcctggaagtgatgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_126838616_126839688
seq2: B6Ng01-073C05.b_45_1112

seq1  GAATTCAGTCCCCTAAATCTAAAGACCATAGATAGGTATTATGGGACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCCCTAAATCTAAAGACCATAGATAGGTATTATGGGACCTT  50

seq1  TTGGAGCTGGAAAATTGAGGACTTGAACCTCAGGGTGGTGAATAAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGGAAAATTGAGGACTTGAACCTCAGGGTGGTGAATAAATCAA  100

seq1  TCTAGTTCCTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCCTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT  150

seq1  TATTTTTAATGAGGCTCCAGTTATGGCAGCATCTATCTTGAAAAATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAATGAGGCTCCAGTTATGGCAGCATCTATCTTGAAAAATCTTT  200

seq1  GATCACAAAAACATAATCCCAGAACTTAAGAGTTTCCAAGAAGAAATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAAAAACATAATCCCAGAACTTAAGAGTTTCCAAGAAGAAATTAG  250

seq1  CCACATTTGGGGATGAAGAAGGGAGAGTGAGACCAAAGAGGAATGGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGGGGATGAAGAAGGGAGAGTGAGACCAAAGAGGAATGGTCAC  300

seq1  CCATCTGTGCGTTAGGCTGGGTTTTGAAGCAGCTCTTTATACTTTGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTGCGTTAGGCTGGGTTTTGAAGCAGCTCTTTATACTTTGTTCC  350

seq1  AAGCTGCTGCTTTGAATTGACAACCATCACTCATTCCGCAATCATCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCTGCTTTGAATTGACAACCATCACTCATTCCGCAATCATCTGCT  400

seq1  GCTTTCTATTTCTGGTATCAGGTTCTGTGTTATGTCCTGGGGACATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTATTTCTGGTATCAGGTTCTGTGTTATGTCCTGGGGACATAATG  450

seq1  AGGAGAAATGGTCCCTGTTCTGGGGAAGAAATTGTAGTCTAGTGGGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATGGTCCCTGTTCTGGGGAAGAAATTGTAGTCTAGTGGGTGGC  500

seq1  AGAGATCTAAGGAACAATTTATAGCCAGGCACAGTGGTGCATGCTGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTAAGGAACAATTTATAGCCAGGCACAGTGGTGCATGCTGGTAG  550

seq1  TTCCAGCAATTGAGCAAGTAGAAACAAGAGGATCAGGAGTTCAAGGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCAATTGAGCAAGTAGAAACAAGAGGATCAGGAGTTCAAGGCCAG  600

seq1  CCTCAGCTAGGTGTGGTGCTTGAGGACAGCATGAGTTATATGAAACCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTAGGTGTGGTGCTTGAGGACAGCATGAGTTATATGAAACCTTG  650

seq1  GCTCAAAAACAAAACAAAACAACAAAACAAACCAAAAAAAACCCAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAAACAAAACAAAACAACAAAACAAACCAAAAAAAACCCAAAGAA  700

seq1  GCAATTACTAAATAAGACAACCAGTGTATCTGTAGAGCTATGTATATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTACTAAATAAGACAACCAGTGTATCTGTAGAGCTATGTATATAAT  750

seq1  GCCAGCCAGGCTGAGAATTGAATGGAGACCATCTGGTTGTTTGTGTGCCA  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCCAGCCAGGCTGAGAATTGAATGGAGACCATCTGGTTTTTTGTGTGCCA  800

seq1  CACCTAGGAGTCCATCATATTTTGAATTTGCAAATCTGCATATTTTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGGAGTCCATCATATTTTGAATTTGCAAATCTGCATATTTTGAAT  850

seq1  ATGTAAATTTGCATATTTGAATATGCAAAGTGTGATTTCCTTTGAGATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATTTGCATATTTGAATATGCAAAGTGTGATTTCCTTTGAGATGA  900

seq1  GCTTACCTTTGCACATCATGATGGGTCTTTCCAGCATGACTGTGCATGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCTTTGCACATCATGATGGGTCTTTCCAGCATGACTGTGCATGAC  950

seq1  TTA-CTCCGATAAGATTTTACTGGCGTTGTGGAGGCAC-AGTTAGAAAGC  998
      ||| ||||||||||| |||||||||| ||||||||||| |||||||||||
seq2  TTACCTCCGATAAGA-TTTACTGGCG-TGTGGAGGCACAAGTTAGAAAGC  998

seq1  CAGCTCTAGTTCTTTCATTAGTTATACAGCAATAACTA-TTGGGGGAAAG  1047
      |||||||||||| |||||  || || |||| ||||||| |||||||||||
seq2  CAGCTCTAGTTCCTTCATATGTAAT-CAGC-ATAACTATTTGGGGGAAAG  1046

seq1  GGAATCTAAGGCAGGGTGCCCTGTAT  1073
      |  |||||||| |||   ||||||||
seq2  G--ATCTAAGGAAGG--TCCCTGTAT  1068

seq1: chr6_126967840_126968969
seq2: B6Ng01-073C05.g_68_1196 (reverse)

seq1  CCCCACTCACTTCCAGGGCTCTCGGCCTGCAACATGGCCTATTTCAAAAT  50
      ||||| |||||||||||   || || | |||||| |||||| |||  |||
seq2  CCCCA-TCACTTCCAGG---CTTGGGCAGCAACAGGGCCTAATTC--AAT  44

seq1  GTGTCGGAAAGACAGTCTATG-AAATTTTTATGTCTTAGA-CAGAAGTAA  98
      |||||||||||  |||||||| |||||||||  ||| ||| |||| ||||
seq2  GTGTCGGAAAGCAAGTCTATGAAAATTTTTAATTCTAAGACCAGAGGTAA  94

seq1  GGAAGCTGGATCTAGT-AAGTGGTAGATCTCATATGTGTGGGAACGCAGG  147
       ||||||||||||||| |||||||||  ||||||||||| ||||||||||
seq2  -GAAGCTGGATCTAGTAAAGTGGTAGGACTCATATGTGT-GGAACGCAGG  142

seq1  GAAGTTCGGCCCCTAGCACCAAAACATGAG-AGGGCAGTGGCTAAAGAG-  195
      |||||||||||||||||||| ||||||||| |||||||||||| ||||| 
seq2  GAAGTTCGGCCCCTAGCACC-AAACATGAGAAGGGCAGTGGCT-AAGAGA  190

seq1  AAAGGAACCTCAGATGCACTAGAAGAGAGCATAGAGTCTGATTCTCCAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACCTCAGATGCACTAGAAGAGAGCATAGAGTCTGATTCTCCAGT  240

seq1  CACTTGGGGGAACAAGATAGGGGATAGAAAGGGAAGAGCTGACCGGGGAC  295
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAC-TGGGGGAACAAGATAGGGGATAGAAAGGGAAGAGCTGACCGGGGAC  289

seq1  AAGTGCTAGGT-CCCCAGGGAAATCTCTCAGCAAAGGATATCTGG-AAAA  343
      ||||||||||| |||||| |||||||||||||||||||||||||| ||||
seq2  AAGTGCTAGGTCCCCCAGAGAAATCTCTCAGCAAAGGATATCTGGAAAAA  339

seq1  GACTAAAGTGAGCTAGTCAGAGGGTGTCTACTT-CCCAACTTTTTGAGC-  391
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  GACTAAAGTGAGCTAGTCAGAGGGTGTCTACTTCCCCAACTTTTTGAGCA  389

seq1  AAGTGTCTCAAAGTTGGCTT-ATGGTGTGAGCTAAAACCATTGCTTCTCC  440
      |||||||||||||||||||| || ||||||||||||||||||||||||||
seq2  AAGTGTCTCAAAGTTGGCTTAATAGTGTGAGCTAAAACCATTGCTTCTCC  439

seq1  AGTACCGTTCTGTGGGCGCTCCTGTGCACCCATCACTTTGTAATCTGCTA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCGTTCTGTGGGCGCTCCTGTGCACCCATCACTTTGTAATCTGCTA  489

seq1  GATGCATGGAATTTTAGGACCTGCTTCAGAGGCTCAGAGGGCTGGGATGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATGGAATTTTAGGACCTGCTTCAGAGGCTCAGAGGGCTGGGATGA  539

seq1  AGACAGTCAATCGGTCCGACTCAGAGTTCAGGGTTTTTGGTTTTTTGTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTCAATCGGTCCGACTCAGAGTTCAGGGTTTTTGGTTTTTTGTTT  589

seq1  TGTTTTGTTTTTTGTTTTTTTGGTCTGGGGTTTTTAGGTTCTGAGGGTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTTTGTTTTTTTGGTCTGGGGTTTTTAGGTTCTGAGGGTTT  639

seq1  GGTGTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  689

seq1  GTGTGTTTTGTTTGGTTGGTTGGTTTGTTTGTTATGCTCAGGTAGGTGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTGTTTGGTTGGTTGGTTTGTTTGTTATGCTCAGGTAGGTGTG  739

seq1  GGTGCTACCAGGCTGTATGGCCTATGGAGAACAAGGAATCTAGTCAGCTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTACCAGGCTGTATGGCCTATGGAGAACAAGGAATCTAGTCAGCTC  789

seq1  TGCCTAAAGTTAATCCAGCCTCCAGAACAGCAGAAGATGTGGTCTAGACA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAAAGTTAATCCAGCCTCCAGAACAGCAGAAGATGTGGTCTAGACA  839

seq1  GGGAATTCTCAGATGCCATTTGTACCAGTCTCTGAGAAAGTGTCAGGGTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTCTCAGATGCCATTTGTACCAGTCTCTGAGAAAGTGTCAGGGTA  889

seq1  AGAACAACCTGAGACTGGGGTGGAATTGGCTGCTCGCTCCTTCTGTAGAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAACCTGAGACTGGGGTGGAATTGGCTGCTCGCTCCTTCTGTAGAG  939

seq1  TGGGGTCCTCCAAAGAGCTTCTTATCGCCAGCCCCAGTGGTACCCAGAAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCCTCCAAAGAGCTTCTTATCGCCAGCCCCAGTGGTACCCAGAAT  989

seq1  CCCTCCGCAGGGAGATCTGGGACAGCTGGCTAGGACTCTGAATGGGCATT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGCAGGGAGATCTGGGACAGCTGGCTAGGACTCTGAATGGGCATT  1039

seq1  TTAGCAGGCAAATCTGCTAGAAACCCAAATTATATAATCACTTACTTCTG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGCAAATCTGCTAGAAACCCAAATTATATAATCACTTACTTCTG  1089

seq1  CCACCTGAATTAACATATTTTATCAATTAGAAAAGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGAATTAACATATTTTATCAATTAGAAAAGAATTC  1129