BAC Information

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BAC

Clone NameB6Ng01-073D11
Chromosome6 (Build37)
Map Location 34,186,941 - 34,188,068
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1401, Exoc4, Lrguk, Slc35b4
Downstream geneAkr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073D11.bB6Ng01-073D11.g
ACCDH890412DH890413
length1,2531,126
definitionDH890412|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D11, 5' end.DH890413|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacactagccatgctacatagtgagaccctgcctcaaaaacaa
aacctcaaaactcactgagagccaagcataccagtgcaaacctgaatcac
agcacaagggaggcaaagacagggggacagagaatttgggccagcctgga
agctcaacttctcggtgacatagttcacgcttgtaattgcaagcatttgg
gaggtagagttatgaggtcaggagcagtttcagctgcctactaagttcta
tgtctgtcagagttatatatgcctatctcagacaataaataaataaataa
ataaataaataaatttctcacaaagtctagagatcctttatgtagctgtc
aaatatcgggacctcataaaattgggaagcttctgtaaggcaaaggacac
tgtcaataggacaaaatgacaaccaacagattgggaaaagatctttacca
atcctacacccaataaaaggctaatatccaacatatacaaagaactcaag
aagttagactccagagaatcaaataaccctataaaatggggtacagagct
aaacaaagaattctcaactgaggaaactcgaatggctgagaagcagctaa
agaaatgttcaatatccttagtcatcagagaaatgcaaataaaacaaccc
tgagattccacctcacaccagtcagaatggctaagatcaaaaactcaagt
gacagcagatgctggcgaggatgtggagaaagaggaacactcctccatta
ctagtgggattgcaagctggtacaaccactctggaaatcagtctggtggt
tcctcagaaaattggacatagtattacctgaggacccagctataccactt
tggggcatatagccagaagatgttccaacatataacaaggacacatgctc
cactatgttcatagcagccttattttataatagccagaagctggaaagaa
cccagatgtcattcaacagagaatgtatacaaaatgtggtacatttacac
aatggagtactactcagctattacaatgactacatgaattcttaagcaat
ggattacaactagaaatattcatcctgaatgaggtaacctgatcacaaaa
gaacacacttggtatgccctcacttgataagtgatattaccaagctttga
tatcccaagatcaattcgaacacattagctcagaaatggagataccagta
tgaatgctcagacttctagagtaacaaatctcctcacggagtgaattatc
gac
gaattcatgacatatctgttaagactgtatacatttcaggatgtcaatat
ttaaatctgattaatatttcccttaaaagtttctgttttccatggactaa
gacattctgatgtaaactttcttcaactgacttcacttggctgcagaaac
catctgctagtatcctgaccaggacacctgtgatatgaacatctcccatt
gtttctgatggggcatatgccacatctggaaaattcatggaaaaagaact
tccctgggatttttccatggaagtacaaccaaagctattttggttctttc
tcaaacagagaaaacttgcctggtgaggtgcttatactgtgtgagagaag
tacacatggagtcttgtggtgaccaagatcactctcactgagaataactg
ctcaccaatgttctagcccaaatctctaagagtcgactgttcagccacac
agaacactttctgtacatggtgatttgtattcacagaattctcctgtagg
aaagaaagaggaagcaacctcgattcaagtgcatttcatgtttatttaga
gaaattagcatgtaaactttgacatgatgaaatcagctacaacacaggtt
tgcacacagtttccatggtggacacaggatggccttttgaaggtgcctgc
aggagaagacatttcttggccacaagggaggctgccctggatgaagaaag
cgggtgctgtgtaataggtacttctgaattctcagggggagttttttttt
ccagttccagaaatatgggaatacaagatgaaaagtgaaggcgcatactt
gagtcactgcagtgcacacagttttgtgtggattttcaggtgcccacaca
ttccatttctctgcatcattaaacattgaccagacatgacctagacttgt
gcacacagaaatcctggccttctgcacctgaccaacctcagtgatctctg
agcatggatattccatcatgaagaggctgcacggagtgcaggccctgcgg
ggcttccaccttcccaaattaattcacgtctagaccattagatccctagc
ctgtggaggttgaacctggaaattttgtaaaggtttgtccatgatggggg
ggggcattgaagtgcatgttctggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34186941_34188068
seq2: B6Ng01-073D11.g_68_1193

seq1  GAATTCATGACATATCTGTTAAGACTGTATACATTTCAGGATGTCAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGACATATCTGTTAAGACTGTATACATTTCAGGATGTCAATAT  50

seq1  TTAAATCTGATTAATATTTCCCTTAAAAGTTTCTGTTTTCCATGGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTGATTAATATTTCCCTTAAAAGTTTCTGTTTTCCATGGACTAA  100

seq1  GACATTCTGATGTAAACTTTCTTCAACTGACTTCACTTGGCTGCAGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTGATGTAAACTTTCTTCAACTGACTTCACTTGGCTGCAGAAAC  150

seq1  CATCTGCTAGTATCCTGACCAGGACACCTGTGATATGAACATCTCCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTAGTATCCTGACCAGGACACCTGTGATATGAACATCTCCCATT  200

seq1  GTTTCTGATGGGGCATATGCCACATCTGGAAAATTCATGGAAAAAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGATGGGGCATATGCCACATCTGGAAAATTCATGGAAAAAGAACT  250

seq1  TCCCTGGGATTTTTCCATGGAAGTACAACCAAAGCTATTTTGGTTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGATTTTTCCATGGAAGTACAACCAAAGCTATTTTGGTTCTTTC  300

seq1  TCAAACAGAGAAAACTTGCCTGGTGAGGTGCTTATACTGTGTGAGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGAGAAAACTTGCCTGGTGAGGTGCTTATACTGTGTGAGAGAAG  350

seq1  TACACATGGAGTCTTGTGGTGACCAAGATCACTCTCACTGAGAATAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGGAGTCTTGTGGTGACCAAGATCACTCTCACTGAGAATAACTG  400

seq1  CTCACCAATGTTCTAGCCCAAATCTCTAAGAGTCGACTGTTCAGCCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAATGTTCTAGCCCAAATCTCTAAGAGTCGACTGTTCAGCCACAC  450

seq1  AGAACACTTTCTGTACATGGTGATTTGTATTCACAGAATTCTCCTGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTTTCTGTACATGGTGATTTGTATTCACAGAATTCTCCTGTAGG  500

seq1  AAAGAAAGAGGAAGCAACCTCGATTCAAGTGCATTTCATGTTTATTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAGGAAGCAACCTCGATTCAAGTGCATTTCATGTTTATTTAGA  550

seq1  GAAATTAGCATGTAAACTTTGACATGATGAAATCAGCTACAACACAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAGCATGTAAACTTTGACATGATGAAATCAGCTACAACACAGGTT  600

seq1  TGCACACAGTTTCCATGGTGGACACAGGATGGCCTTTTGAAGGTGCCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACAGTTTCCATGGTGGACACAGGATGGCCTTTTGAAGGTGCCTGC  650

seq1  AGGAGAAGACATTTCTTGGCCACAAGGGAGGCTGCCCTGGATGAAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGACATTTCTTGGCCACAAGGGAGGCTGCCCTGGATGAAGAAAG  700

seq1  CGGGTGCTGTGTAATAGGTACTTCTGAATTCTCAGGGGGAGTTTTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGCTGTGTAATAGGTACTTCTGAATTCTCAGGGGGAGTTTTTTTTT  750

seq1  CCAGTTCCAGAAATATGGGAATACAAGATGAAAAGTGAAGGCGCATACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCCAGAAATATGGGAATACAAGATGAAAAGTGAAGGCGCATACTT  800

seq1  GAGTCACTGCAGTGCACACAGTTTTGTGTGGATTTTCAGGTGCCCACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACTGCAGTGCACACAGTTTTGTGTGGATTTTCAGGTGCCCACACA  850

seq1  TTCCA-TTCTCTGCATCATTAAACATTGACCAGACATGACCTAGACTTGT  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCTCTGCATCATTAAACATTGACCAGACATGACCTAGACTTGT  900

seq1  GCACACAGAAATCCTGGCCTTCTGCACCTGACCAACCTCAGTGATCTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGAAATCCTGGCCTTCTGCACCTGACCAACCTCAGTGATCTCTG  950

seq1  AGCATTGGATATTTCCATCATGAAGAGGCTGCACGGAGTGCAGGCACTGC  999
      |||| |||||| ||||||||||||||||||||||||||||||||| ||||
seq2  AGCA-TGGATA-TTCCATCATGAAGAGGCTGCACGGAGTGCAGGCCCTGC  998

seq1  GTGGCTCCCACC-TCTCAAACTAAATCACGTCTAGACCATTAGATTCCTA  1048
      | |||| ||||| || |||| ||| |||||||||||||||||||| ||||
seq2  GGGGCTTCCACCTTCCCAAATTAATTCACGTCTAGACCATTAGATCCCTA  1048

seq1  GCCTGTGGAGTTGTAACCTGGAAATTTTGAAAGGGTTTGTCACATGATGG  1098
      |||||||||| |  ||||||||||||||| || |||||||| ||||||||
seq2  GCCTGTGGAGGTTGAACCTGGAAATTTTGTAAAGGTTTGTC-CATGATGG  1097

seq1  GGGGGGGCATTTGAAGTGCATGTTCTGGAA  1128
      ||||||||| ||||||||||||||||||||
seq2  GGGGGGGCA-TTGAAGTGCATGTTCTGGAA  1126