BAC Information

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BAC

Clone NameB6Ng01-073F18
Chromosome6 (Build37)
Map Location 15,262,344 - 15,263,295
singlet/doubletsinglet
Overlap geneFoxp2
Upstream geneLOC667797, Ppp1r3a, LOC100040568
Downstream geneMdfic, LOC100041116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073F18.bB6Ng01-073F18.g
ACCDH890516DH890517
length1,2301,040
definitionDH890516|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F18, 5' end.DH890517|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
tccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcacaattggtgctggc
acaactggttgttatcgtgtagagatgcgatcgatccatacttatctcct
tgtactagtcaatctagtggatcaggactcacataaaaccagagaaactg
aacttatagagagaaagtggggaaagccttgagattggcaatggaaaatt
cttgaaacgaacagcatgcttgtgcttagatcgagattgacaatgactta
tgaacctccaagttctcgcaggcaagacggtcatagcaatgacaccacgg
attcgaattaggcttaatcccactaataag
gaattccttcactctgctatgacatcatcaagaaccacactcctgggaaa
gggtgctgattggccagcctattattatctattcagccttggtccagtca
caccaatttctatattaaagaatacagaatccaagtagttcccaaataaa
aacactttacctttagcgaaaaggaaaattagtgctgagtgggaaagtta
atagattttctatcttgtgaaatggagttgattttctactaaactgcaac
ctttggataacaattgtagtctcagataatttccctgtctccacatatgg
ggaactgaaaattctagggcacagctaggaaatgacaaagggtgacaact
gcagtaggtttccggacttgacacaattataccttagcttctgtgctatc
ccaatccattaaaaataagtgagccttcttattttcttttagtactttta
ctatttttttttggcagtccagccattgtccccctctagtatgccctccc
acagttcctcatctcattcttcctcccatatgtttttaagaggatgcccc
tccaccctccctgggcctcaccactccctggggtctcaagtccctcaagg
gttaggcacatctcctcccagaggccagatcagtcagtcctatgctgtat
atgtgtcaggggccttgaatcagctagtgtaccctgcctggttgatagct
cagtgtctgagagatctcagagaaccggttagttgagactgatgctcttc
ctatggggttgccctcctcagcttcttccagcctttcctaattcaaccac
ggggcttcagttcagtggttgcatgtaactatctgcttctgtctcagtca
gctacttgttgggcctctttgagaagtcatgattcttctgaggaaggcat
gccaggcttcaatcttgtaggcagaccatagcatcagtaatagtgtcagg
tcttggaccctccccttgagatgatctccagtgggctggtcactggactg
cctttccctcagtctctcctccatttttgtccctgccagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_15262344_15263295
seq2: B6Ng01-073F18.g_66_1018

seq1  GAATTCCTTCACTCTGCTATGACATCATCAAGAACCACACTCCTGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCACTCTGCTATGACATCATCAAGAACCACACTCCTGGGAAA  50

seq1  GGGTGCTGATTGGCCAGCCTATTATTATCTATTCAGCCTTGGTCCAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGATTGGCCAGCCTATTATTATCTATTCAGCCTTGGTCCAGTCA  100

seq1  CACCAATTTCTATATTAAAGAATACAGAATCCAAGTAGTTCCCAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATTTCTATATTAAAGAATACAGAATCCAAGTAGTTCCCAAATAAA  150

seq1  AACACTTTACCTTTAGCGAAAAGGAAAATTAGTGCTGAGTGGGAAAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTTACCTTTAGCGAAAAGGAAAATTAGTGCTGAGTGGGAAAGTTA  200

seq1  ATAGATTTTCTATCTTGTGAAATGGAGTTGATTTTCTACTAAACTGCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTTCTATCTTGTGAAATGGAGTTGATTTTCTACTAAACTGCAAC  250

seq1  CTTTGGATAACAATTGTAGTCTCAGATAATTTCCCTGTCTCCACATATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATAACAATTGTAGTCTCAGATAATTTCCCTGTCTCCACATATGG  300

seq1  GGAACTGAAAATTCTAGGGCACAGCTAGGAAATGACAAAGGGTGACAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAAAATTCTAGGGCACAGCTAGGAAATGACAAAGGGTGACAACT  350

seq1  GCAGTAGGTTTCCGGACTTGACACAATTATACCTTAGCTTCTGTGCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGGTTTCCGGACTTGACACAATTATACCTTAGCTTCTGTGCTATC  400

seq1  CCAATCCATTAAAAATAAGTGAGCCTTCTTATTTTCTTTTAGTACTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCATTAAAAATAAGTGAGCCTTCTTATTTTCTTTTAGTACTTTTA  450

seq1  CTATTTTTTTTTGGCAGTCCAGCCATTGTCCCCCTCTAGTATGCCCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTTTTTGGCAGTCCAGCCATTGTCCCCCTCTAGTATGCCCTCCC  500

seq1  ACAGTTCCTCATCTCATTCTTCCTCCCATATGTTTTTAAGAGGATGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCTCATCTCATTCTTCCTCCCATATGTTTTTAAGAGGATGCCCC  550

seq1  TCCACCCTCCCTGGGCCTCACCACTCCCTGGGGTCTCAAGTCCCTCAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCTCCCTGGGCCTCACCACTCCCTGGGGTCTCAAGTCCCTCAAGG  600

seq1  GTTAGGCACATCTCCTCCCAGAGGCCAGATCAGTCAGTCCTATGCTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCACATCTCCTCCCAGAGGCCAGATCAGTCAGTCCTATGCTGTAT  650

seq1  ATGTGTCAGGGGCCTTGAATCAGCTAGTGTACCCTGCCTGGTTGATAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCAGGGGCCTTGAATCAGCTAGTGTACCCTGCCTGGTTGATAGCT  700

seq1  CAGTGTCTGAGAGATCTCAGAGAACCGGTTAGTTGAGACTGATGCTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGAGAGATCTCAGAGAACCGGTTAGTTGAGACTGATGCTCTTC  750

seq1  CTATGGGGTTGCCCTCCTCAGCTTCTTCCAGCCTTTCCTAATTCAACCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGGTTGCCCTCCTCAGCTTCTTCCAGCCTTTCCTAATTCAACCAC  800

seq1  GGGGCTTCAGTTCAGTGGTTGCATGTAACTATCTGCTTCTGTCTCAGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCAGTTCAGTGGTTGCATGTAACTATCTGCTTCTGTCTCAGTCA  850

seq1  GCTACTTGTTGGGCCTCTTTGAGAAGTCATGATTCTTCTGAGGAAGGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTGTTGGGCCTCTTTGAGAAGTCATGATTCTTCTGAGGAAGGCAT  900

seq1  GCCAGGCTTCAATC-TGTAGGCAGACCATAGCATCAGTAATAGTGTCAGG  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCCAGGCTTCAATCTTGTAGGCAGACCATAGCATCAGTAATAGTGTCAGG  950

seq1  TCT  952
      |||
seq2  TCT  953