BAC Information

Click to search

BAC

Clone NameB6Ng01-073I24
Chromosome6 (Build37)
Map Location 95,482,015 - 95,483,122
singlet/doubletsinglet
Overlap geneSuclg2
Upstream geneSlc25a26, Lrig1, LOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912
Downstream geneLOC665886, LOC545867, C630007B19Rik, LOC100043685, 1700123L14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073I24.bB6Ng01-073I24.g
ACCDH890652DH890653
length1,098977
definitionDH890652|Mus musculus domesticus DNA, BAC clone: B6Ng01-073I24, 5' end.DH890653|Mus musculus domesticus DNA, BAC clone: B6Ng01-073I24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagaactcacatggtggctcaatcttaactccagtatcatgc
cacctcgtgccttcttgtggctcttgcatgtgctaagcacacatgtagtg
cagttatatttgcatgcagcaaaacacacatatacaaaataaaacttatt
ttctaagttgtgattcatttagcaagtgagatcttgccatacgaaagcac
ataatacttagactgggatagtatttacaaccagctgtctctcagatggc
ccttggtgactgataccatatgctaatgttcacattcttatgaaacccct
gccattgcttgtggactgtgtctatgatccacttgtgacatgtggagagg
aaatatttcataaagcctggcatttctgtcatgtgggctactgtctgctt
tcttctaacatggtaagttttttgttgttattattttgtgtgcttatgtg
cttggttaaatcctctctctgtcctcaaaaatacactaagaaggattacg
caagatcacatgatggcagccatgcctttgcacattggtattgcagggtg
tagtgtgctctagttcagcctgtcccttctcagttaggatagtatcttcc
ctctcagcagagaactgtttaacaggaaacagaacagataatgtatttca
attcacatcacattggaaaacattatttgggaaaaaatattgtacattta
taattaaatacaaaagaaatataagattgttattctgggatcatataata
ttttaaaatgtacatcacttaaaattaagaaaattacatatttaatcaga
atcagtggttaattttcacgtaccacttacaggtgactaataacctataa
atgcacactaatgttagtgaagacacttaatgaggatccagtaataggca
ccagctttcctagccctcactgatgattattttgaaggctgaaggtctag
ctagtgaagatttttttccctgtgagcttctctatggtgggatttcctga
atggctgcgacttttctgtagtcatctgctgggctaactttgctgtcagc
ccattacatgtgaagtgctctactgtccctgagtctccactgaagtct
gaattccagttatcactcccagtactctcttcctccaccattcacctgat
ccttcctattcccttctccaccatatttacccttcccagggagattcatg
ggttctcctctgatccctccttgttactgggcctctctgggttatgattt
agtttatatctaatgtctacttaaaagtgagtgcataccatgtttgtctt
tctgggtctggggtacctaactcagattgttttgttttgttttgttttgt
tttttctagttctatccttttgcctgcaatttttatgattttttttgttg
ttgttaaaaacagctgagttatactttgttgtgtaaatgcaccacatttc
cttaaatcattattcagttgaggaatatgtaggttgcttctagtttctgg
caatagccacaataaggctgttgtgaacatagctgaacaagtgtccttgt
ggtaggttggaggattcttttgggtcttgagatagaattcttcctgattt
tctgagaaactgctatattgatttcaaaagtggctgatcaagtttgcact
tccactaacaatggaggagtgcttccccagctccacaaccttgccagcat
gactgtcactgtgtttttttatcttatccattctgacaagtaagcgtaga
tgggatctcagagtcattttgatttgcatttccctaaagactaagaatgt
tgaatatttcttttaatgtttctttggtcacttgagattctgtgttgaaa
attctctattagatctgtaccccattttaaactgaattacttctcttttg
atatctacttttcttcatgtctttatatattttggatattagccctctgt
cagatgtgaattggtgaaatctttccccatccataggcacagttgtcctg
ttgacagttccttggcttacagaaacttcaatttcagaggtcccattata
attgtccacttacggctgtgatattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_95482015_95483122
seq2: B6Ng01-073I24.b_47_1144 (reverse)

seq1  AGACTCTCAGTGGGAGACTCACGAGGACATGTAGAGCACCTCACATGTGA  50
      ||||| ||||| |||||||||   ||||| ||||||||| |||||||| |
seq2  AGACT-TCAGT-GGAGACTCA--GGGACA-GTAGAGCACTTCACATGT-A  44

seq1  ATGGGCTGAACAGCAAAGTTAGCCCAGCAGGATGACTACAGAAAAGTCGC  100
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  ATGGGCTG-ACAGCAAAGTTAGCCCAGCA-GATGACTACAGAAAAGTCGC  92

seq1  AGCCATTCAGGAAAATCCCACCAGTAGAGAAGCTCACAGTGAAAAAAATC  150
      ||||||||||| ||||||||||| ||||||||||||||| ||||||||||
seq2  AGCCATTCAGG-AAATCCCACCA-TAGAGAAGCTCACAGGGAAAAAAATC  140

seq1  TTCACTAGCTAGAACCTTCAGCCTTCAAAATAATCATCAGTGAGGGCTAG  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCACTAGCTAG-ACCTTCAGCCTTCAAAATAATCATCAGTGAGGGCTAG  189

seq1  GAAAGCTGGTGCCTATTACTGGATCCTCATTAAGTTGTCTTCACTAACAT  250
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAAAGCTGGTGCCTATTACTGGATCCTCATTAAG-TGTCTTCACTAACAT  238

seq1  TAGTGTGCATTTATAGGTTATTAGTCACCTGTAAGTGGTACGTGAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGCATTTATAGGTTATTAGTCACCTGTAAGTGGTACGTGAAAATT  288

seq1  AACCACTGATTCTGATTAAATATGTAATTTTCTTAATTTTAAGTGATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGATTCTGATTAAATATGTAATTTTCTTAATTTTAAGTGATGTA  338

seq1  CATTTT-AAATATTATATGAT-CCAGAATAACAATCTTATATTTCTTTTG  398
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  CATTTTAAAATATTATATGATCCCAGAATAACAATCTTATATTTCTTTTG  388

seq1  TATTTAATTATAAATGTACAATATTTTTTCCCAAATAATGTTTTCCAATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATTATAAATGTACAATATTTTTTCCCAAATAATGTTTTCCAATG  438

seq1  TGATGTGAATTGAAATACATTATCTGTTCTGTTTCCTGTTAAACAGTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGAATTGAAATACATTATCTGTTCTGTTTCCTGTTAAACAGTTCT  488

seq1  CTGCTGAGAGGGAAGATACTATCCTAACTGAGAAGGGACAGGCTGAACTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAGAGGGAAGATACTATCCTAACTGAGAAGGGACAGGCTGAACTA  538

seq1  GAGCACACTACACCCTGCAATACCAATGTGCAAAGGCATGGCTGCCATCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACACTACACCCTGCAATACCAATGTGCAAAGGCATGGCTGCCATCA  588

seq1  TGTGATCTTGCGTAATCCTTCTTAGTGTATTTTTGAGGACAGAGAGAGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTTGCGTAATCCTTCTTAGTGTATTTTTGAGGACAGAGAGAGGA  638

seq1  TTTAACCAAGCACATAAGCACACAAAATAATAACAACAAAAAACTTACCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAAGCACATAAGCACACAAAATAATAACAACAAAAAACTTACCA  688

seq1  TGTTAGAAGAAAGCAGACAGTAGCCCACATGACAGAAATGCCAGGCTTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAGAAAGCAGACAGTAGCCCACATGACAGAAATGCCAGGCTTTA  738

seq1  TGAAATATTTCCTCTCCACATGTCACAAGTGGATCATAGACACAGTCCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTTCCTCTCCACATGTCACAAGTGGATCATAGACACAGTCCAC  788

seq1  AAGCAATGGCAGGGGTTTCATAAGAATGTGAACATTAGCATATGGTATCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGGCAGGGGTTTCATAAGAATGTGAACATTAGCATATGGTATCA  838

seq1  GTCACCAAGGGCCATCTGAGAGACAGCTGGTTGTAAATACTATCCCAGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAAGGGCCATCTGAGAGACAGCTGGTTGTAAATACTATCCCAGTC  888

seq1  TAAGTATTATGTGCTTTCGTATGGCAAGATCTCACTTGCTAAATGAATCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATTATGTGCTTTCGTATGGCAAGATCTCACTTGCTAAATGAATCA  938

seq1  CAACTTAGAAAATAAGTTTTATTTTGTATATGTGTGTTTTGCTGCATGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGAAAATAAGTTTTATTTTGTATATGTGTGTTTTGCTGCATGCA  988

seq1  AATATAACTGCACTACATGTGTGCTTAGCACATGCAAGAGCCACAAGAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAACTGCACTACATGTGTGCTTAGCACATGCAAGAGCCACAAGAAG  1038

seq1  GCACGAGGTGGCATGATACTGGAGTTAAGATTGAGCCACCATGTGAGTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAGGTGGCATGATACTGGAGTTAAGATTGAGCCACCATGTGAGTTC  1088

seq1  TAGAGAATTC  1108
      ||||||||||
seq2  TAGAGAATTC  1098