BAC Information

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BAC

Clone NameB6Ng01-075D24
ChromosomeX (Build37)6 (Build37)
Map Location 110,225,393 - 110,226,37118,835,710 - 18,835,968
singlet/doubletsingletsinglet
Overlap geneChm
Upstream geneTex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112
Downstream geneEG664918, Dach2, LOC237016, EG664945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075D24.bB6Ng01-075D24.g
ACCDH891859DH891860
length973272
definitionDH891859|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D24, 5' end.DH891860|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,225,393 - 110,226,371)(18,835,710 - 18,835,968)
sequence
gaattcaatatcctgcttctataccttactagatgtaggagttaaaatgc
attttagaataatcagttgttttccaacctgaggaagcatattaaaatta
cgatctctaataatcccaaaatacaagttaatggaaaggaatacctttgt
actcatcgggatggtcttcatattccacacgaaatgtaagaaatttctta
accattctcttttctaccatagtaagttgtttgctattgaagacatctgc
tctggaacaggggacctgaaaggcatttgaaagtgaaggtttcaaagtac
ttcctattgacacaagtattccaggattccacgttttagtcctttcctca
ttacaaggttatcatttccattccattctcgctgcttcatgtcacctttc
atcacttctaatagcatctctcttaactacggagataatgaacttgagag
ctctgttacttaattctgccaagttgttcttcatgcctttaaaagggcaa
tggcacgtcacccctaatagcaaagaaatgacaattcaaatatggtactg
ctgactgaaactagcatttcctcaacattaaaatcaacctgaggaataaa
tgtacagaaacaaaacagaagttttaagggggctcattttgtatttagat
ttatgaaccaccgtgcaaagttgaaactcatccttactaggaaatagaaa
gtgttgcttatccttccgacatgagtaatagtaacttgtctcagagagtt
gagcagcacagtacctgttccacagttccttctcgaaatgcaagaatcct
cgtaatgtttgtaaactctgcataccgactaacatttgatttgattagaa
gatcaatcagtaatccccgagaatagagaagctgtagacagaagttttta
gagaacacaccataagctaatcggctaaaatggcaactgacatgcatgtg
catgaacagtgtgcttgcacgtg
gaattctttgttcagttctgagccccattttttgatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatgtgttggatattattccc
ctatctgatttaggataggtaaagatcctttcctaatctgttggtgggct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttacgtcccatttgccaattctcaatcttacagcacaagccattgctgtt
ctgttcaggatccttgcaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110225393_110226371
seq2: B6Ng01-075D24.b_43_1015

seq1  GAATTCAAATAGCCTGCTTCTATAGCTTACTAGATCTAGGAGTTAAAATG  50
      |||||| |||| |||||||||||| |||||||||| ||||||||||||||
seq2  GAATTC-AATATCCTGCTTCTATACCTTACTAGATGTAGGAGTTAAAATG  49

seq1  CATTTTAGAATAATCAGTTGTTTTCCAACCTGAGGAAGCATATTAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGAATAATCAGTTGTTTTCCAACCTGAGGAAGCATATTAAAATT  99

seq1  ACAATCTCTAATAATCAGAAAATACAAGTTAATGGAAAGCAATACCTTTG  150
      || |||||||||||||  ||||||||||||||||||||| ||||||||||
seq2  ACGATCTCTAATAATCCCAAAATACAAGTTAATGGAAAGGAATACCTTTG  149

seq1  TACTCATCGGGATGGTCTTCATATTCCACACAAAATGTAAGAAATTTCAT  200
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  TACTCATCGGGATGGTCTTCATATTCCACACGAAATGTAAGAAATTTCTT  199

seq1  AAGCATTCGCTTTTCTACCATAGTAAGTTGTTTGCTATTGAAGACATCTG  250
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTCTCTTTTCTACCATAGTAAGTTGTTTGCTATTGAAGACATCTG  249

seq1  CTCTGGAACAGGGGACCTGAAAGGCATTTGAAAGTGAAGGTTTCAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAACAGGGGACCTGAAAGGCATTTGAAAGTGAAGGTTTCAAAGTA  299

seq1  CTTCCTATTGACACAAGTATTCCAGGATTCCACGTTTTAGTCCTTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATTGACACAAGTATTCCAGGATTCCACGTTTTAGTCCTTTCCTC  349

seq1  ATTACAAGGTTATCATTTCCATTCCATTCTCGCTGCTTCATGTCACCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAGGTTATCATTTCCATTCCATTCTCGCTGCTTCATGTCACCTTT  399

seq1  CATCACTTCTAATAGCATCTCTCTTAACTACAGAGATAATTAACTTGAGA  450
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CATCACTTCTAATAGCATCTCTCTTAACTACGGAGATAATGAACTTGAGA  449

seq1  GCTCTGTTACTTAATTCTGCCAAGTTGTTCTTCATGCCTTTAAAAGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTTACTTAATTCTGCCAAGTTGTTCTTCATGCCTTTAAAAGGGCA  499

seq1  ATGGCACGTCACCCCTAATAGCAAAGAAATGACAATTCAAATATGGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACGTCACCCCTAATAGCAAAGAAATGACAATTCAAATATGGTACT  549

seq1  GCTGACTGAAACTAGCATTTCCTCAACATTAAAATCAACCTGAGGAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGAAACTAGCATTTCCTCAACATTAAAATCAACCTGAGGAATAA  599

seq1  ATGTTCAAAAACAAAACAGAAGTTTTAATGGGGCTCATTTTGTATTTAGA  650
      |||| || |||||||||||||||||||| |||||||||||||||||||||
seq2  ATGTACAGAAACAAAACAGAAGTTTTAAGGGGGCTCATTTTGTATTTAGA  649

seq1  TTTATAAACCACCATGCAAAGTTGAAACTCAGCCTTACTAGGAAATAGTA  700
      ||||| ||||||| ||||||||||||||||| |||||||||||||||| |
seq2  TTTATGAACCACCGTGCAAAGTTGAAACTCATCCTTACTAGGAAATAGAA  699

seq1  AGTGTTGCTTATCCTTCCAACATGAGTAATAGTAACTTGTCTCAGAGAGT  750
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGTGTTGCTTATCCTTCCGACATGAGTAATAGTAACTTGTCTCAGAGAGT  749

seq1  TGAGCAGCACAGTACCTGTTCCACAGTTCCTTCTCGAAATGCAAGAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCACAGTACCTGTTCCACAGTTCCTTCTCGAAATGCAAGAATCC  799

seq1  TCGTAATGTTTTTAAACTCTGCATACCGACTAACATTTGATTTGATTAGA  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCGTAATGTTTGTAAACTCTGCATACCGACTAACATTTGATTTGATTAGA  849

seq1  AGATCAATTAGTAATCCCCGAGAATAGAGAAGCTGTAGACAGAAAGTATT  900
      |||||||| ||||||||||||||||||||||||||||||||| |||| ||
seq2  AGATCAATCAGTAATCCCCGAGAATAGAGAAGCTGTAGACAG-AAGT-TT  897

seq1  TTAGAGAATAACACCAAAAGCAAATCAAATAAAAATGGTAACTGACATGC  950
      ||||||||  |||||| |||| ||||   | ||||||| |||||||||||
seq2  TTAGAGAA-CACACCATAAGCTAATCGGCT-AAAATGGCAACTGACATGC  945

seq1  ATGTGCATGAACATGTGTGCGTGCACGTG  979
      ||||||||||||| |||||| ||||||||
seq2  ATGTGCATGAACA-GTGTGCTTGCACGTG  973

seq1: chr6_18835710_18835968
seq2: B6Ng01-075D24.g_65_324 (reverse)

seq1  TCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAATCGACAAA  49
      |||||||||||||||||||||| |||||||| || | |||||| | ||||
seq2  TCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATTGGCAAA  50

seq1  TGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAA  99
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGGACGTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCATCAA  100

seq1  TAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTA  149
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  TAAGACAAAAAGCCCACCAACAGATTAGGAAAGGATCTTTACCTATCCTA  150

seq1  AATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTG  199
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  AATCAGATAGGGGAATAATATCCAACACATATAAAGAACTCAAGAAGGTG  200

seq1  GACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAA  249
      |||||||||||||||||||||||||| || ||||||||||||||||||||
seq2  GACTTCAGAAAATCAAATAACCCCATCAAAAAATGGGGCTCAGAACTGAA  250

seq1  CAAAGAATTC  259
      ||||||||||
seq2  CAAAGAATTC  260