BAC Information

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BAC

Clone NameB6Ng01-075M12
Chromosome6 (Build37)
Map Location 20,454,236 - 20,455,386
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040838
Downstream geneKcnd2, LOC100041343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075M12.bB6Ng01-075M12.g
ACCDH892241DH892242
length1,1521,019
definitionDH892241|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M12, 5' end.DH892242|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatctggaggagactgatcgttacttttcttctctattagtgt
tcacagtctctaccagtattcacagtgtctaccagtgttcactgtattta
ccagtgttcacagtgtctaccagtgttcactgtatttaccagtgttcgca
gtatctaccagtgttctcagtatttgccagtattgtgaagcttaatagta
agaaagaaacttccacctgagtaacagcttgatttctcaattttctatga
ctcaagtatgtgtggcatcttcagcagtagggcctaactgtagagttctg
aagagtcaccagtgtgacttgccaatagcatgtaatatttggagtgtatg
ggttctgtttggccaataactaagaagacataacttgctcctgagacaga
gctgtttaattatgaacatgtgtggtttaggatgttttttatgtgagaat
aaatagatttattttatctctcccttcacagtgagtgacagacaacactg
tgactaatctgtagtaagtagacacagaaaaaaatcaattcatggaataa
tatttaaatgccagtgaaaattaaatattacttgaactccatttaagaca
gaagtcttcttatgaaagtatgtgaaaaattggtatactgcttcatctat
tcaatacagtgatagggactccaggcagtgtgacatatcaggacagtcat
atcaagagacatgttttatcacagctctggagcactgatattagtagtag
acatgcagataaagagagctgatgcctttcattccatacattgaaaagac
agtattagattttgactctttttttttcctgctaatcagaagagtaaagg
tttgagataacaggttctgaagtcactttttgaacaactatttggaatac
tgaccaagctaataagtccacatttgttgatggttacatccaagaaatgt
atgagtcttaccatctatgaataacgaacattatgccagtgaagttggat
atgaagtgcatcatgctacatggaagataggtgcggatgctccaagtact
aagttatttaactggtacaggacaccgagatctctacaatgttacttttc
atttaattccaatgttatctttacttgaaggttactagaaataaagatta
at
gaattctaggcttcttgcccaaggacagtgtgtgagatgttctggtatta
gagattctgtagctatgctaattccactataaatcattagcattaggata
aaaacataacaaagcaaacaccagttaatttttaaatgccaaacagcagt
tgtatttgggaatattcctaacagattaaaatgtattgtttttgttttaa
aatcacttcatttctcttagaggaaatcatctatcagatttgaaatgtcc
ttattactttaaggaaattgctaaaacaagtaactactcaaactaattac
tgagtaattgtggctgtatatctatctgtgcatttaagacacaaagtatt
tctgcaactcagaaacactattgtaactgactcttatgtaggtcttctca
cttctttatcttaattttaatcaatttttaaataaatgtacttaagaaat
ttccatctcaaggggaggctccaaggcctgacattattactgatgctatg
atgtgcttacagacagtagactagcaggtctgccttctgagaggtccaac
atgcagctgactgagacagatgcagatatttaaactcaaccattggactg
aagacagggacctctgtggttgaattagggaaagacaatagtaagctgag
aagaagggtgatcccgtaggaagaccagcagccttaactaactgagacct
ctgaaatctctcagacactgaaccaccaaacaggcagcatacacaagatg
gtccaagacccccaacacatatacagcagaagtcagcctgatctgacttc
agtgggagaagacgtgcctaacaatctagacacttgagggcccaggcaga
gggcaggggaagacatccttttggagattaggggatgggcaaggaagaat
gtggaaagtagagcatgaaaggggcaaggactgattgtaaataaataata
aatatatatatttaactggatttgtactgatgagttttgtgatgttagta
tatggtggtccaaagacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_20454236_20455386
seq2: B6Ng01-075M12.b_49_1200

seq1  GAATTCACATCTGGAGGAGACTGATCGTTACTTTTCTTCTCTATTAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTGGAGGAGACTGATCGTTACTTTTCTTCTCTATTAGTGT  50

seq1  TCACAGTCTCTACCAGTATTCACAGTGTCTACCAGTGTTCACTGTATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTCTCTACCAGTATTCACAGTGTCTACCAGTGTTCACTGTATTTA  100

seq1  CCAGTGTTCACAGTGTCTACCAGTGTTCACTGTATTTACCAGTGTTCGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTCACAGTGTCTACCAGTGTTCACTGTATTTACCAGTGTTCGCA  150

seq1  GTATCTACCAGTGTTCTCAGTATTTGCCAGTATTGTGAAGCTTAATAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTACCAGTGTTCTCAGTATTTGCCAGTATTGTGAAGCTTAATAGTA  200

seq1  AGAAAGAAACTTCCACCTGAGTAACAGCTTGATTTCTCAATTTTCTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAACTTCCACCTGAGTAACAGCTTGATTTCTCAATTTTCTATGA  250

seq1  CTCAAGTATGTGTGGCATCTTCAGCAGTAGGGCCTAACTGTAGAGTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTATGTGTGGCATCTTCAGCAGTAGGGCCTAACTGTAGAGTTCTG  300

seq1  AAGAGTCACCAGTGTGACTTGCCAATAGCATGTAATATTTGGAGTGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCACCAGTGTGACTTGCCAATAGCATGTAATATTTGGAGTGTATG  350

seq1  GGTTCTGTTTGGCCAATAACTAAGAAGACATAACTTGCTCCTGAGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTTTGGCCAATAACTAAGAAGACATAACTTGCTCCTGAGACAGA  400

seq1  GCTGTTTAATTATGAACATGTGTGGTTTAGGATGTTTTTTATGTGAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTAATTATGAACATGTGTGGTTTAGGATGTTTTTTATGTGAGAAT  450

seq1  AAATAGATTTATTTTATCTCTCCCTTCACAGTGAGTGACAGACAACACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATTTATTTTATCTCTCCCTTCACAGTGAGTGACAGACAACACTG  500

seq1  TGACTAATCTGTAGTAAGTAGACACAGAAAAAAATCAATTCATGGAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATCTGTAGTAAGTAGACACAGAAAAAAATCAATTCATGGAATAA  550

seq1  TATTTAAATGCCAGTGAAAATTAAATATTACTTGAACTCCATTTAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAATGCCAGTGAAAATTAAATATTACTTGAACTCCATTTAAGACA  600

seq1  GAAGTCTTCTTATGAAAGTATGTGAAAAATTGGTATACTGCTTCATCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTTCTTATGAAAGTATGTGAAAAATTGGTATACTGCTTCATCTAT  650

seq1  TCAATACAGTGATAGGGACTCCAGGCAGTGTGACATATCAGGACAGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACAGTGATAGGGACTCCAGGCAGTGTGACATATCAGGACAGTCAT  700

seq1  ATCAAGAGACATGTTTTATCACAGCTCTGGAGCACTGATATTAGTAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAGACATGTTTTATCACAGCTCTGGAGCACTGATATTAGTAGTAG  750

seq1  ACATGCAGATAAAGAGAGCTGATGCCTTTCATTCCATACATTGAAAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGATAAAGAGAGCTGATGCCTTTCATTCCATACATTGAAAAGAC  800

seq1  AGTATTAGATTTTGACTCTTTTTTTTTCCTGCTAATCAGAAGAGTAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAGATTTTGACTCTTTTTTTTTCCTGCTAATCAGAAGAGTAAAGG  850

seq1  TTTGAGATAACAGGTTCTGAAGTCAC-TTTTGAACAACTATTGGAAATAC  899
      |||||||||||||||||||||||||| ||||||||||||||| | |||||
seq2  TTTGAGATAACAGGTTCTGAAGTCACTTTTTGAACAACTATTTGGAATAC  900

seq1  TGACCAAGCTAATAAGTCCACATTTGATGATGGTTACAT-CAAGAAATGT  948
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  TGACCAAGCTAATAAGTCCACATTTGTTGATGGTTACATCCAAGAAATGT  950

seq1  ATGAGTCTTACCATCTATGAATAACGAACATTATGCCAGTGAAG-TGGAT  997
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGAGTCTTACCATCTATGAATAACGAACATTATGCCAGTGAAGTTGGAT  1000

seq1  ATGAAGTGCATCAATGCTACAT-GAAGATAGGGTGCGGATGCTCAGAGAA  1046
      |||||||||||| ||||||||| ||||||| |||||||||||||  || |
seq2  ATGAAGTGCATC-ATGCTACATGGAAGATA-GGTGCGGATGCTCCAAGTA  1048

seq1  CT-AGTTAATTAACTGGTACAGGACA-CGAGAATCTCTACAATGTTTACT  1094
      || ||||| ||||||||||||||||| |||| |||||||||||| |||||
seq2  CTAAGTTATTTAACTGGTACAGGACACCGAG-ATCTCTACAATG-TTACT  1096

seq1  TTTCATTAAATCCAAATG-TATCTTTACTATGAAAGTTTACTAGAAAATA  1143
      ||||||| ||| | |||| |||||||||| || ||| ||||||||||  |
seq2  TTTCATTTAATTCCAATGTTATCTTTACT-TG-AAGGTTACTAGAAATAA  1144

seq1  AGATTAAT  1151
      ||||||||
seq2  AGATTAAT  1152