BAC Information

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BAC

Clone NameB6Ng01-075O02
Chromosome6 (Build37)
Map Location 17,528,948 - 17,529,707
singlet/doubletsinglet
Overlap genenone
Upstream geneTcfec, EG435881, Tes, EG232599, Cav2, Cav1, Met
Downstream geneCapza2, St7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075O02.bB6Ng01-075O02.g
ACCDH892313DH892314
length762320
definitionDH892313|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O02, 5' end.DH892314|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcccctcctccctctcctctcccccttctccctgtcctactcct
cacttgtattctgaaaggaccccagcattcccctttctacttcctcacat
aatttacttattagtaggtatagttaatatctaaataactctaaatcctg
tattattgctggtttttttttaaggaattaggggtctaaagagagatcac
tggataaagtcctaagtgcataagcctaaggacctgagttcaaatctcta
ccacccatgtttctttttttaaaaaagctccgccttccctaagagtttat
ctaattccaaatggccagtcctaaacacttgtacatataagcaactgtaa
atggacttggtagtttgtatgtttgtgtgtgcatgtgtgtgtatgtagga
caatagttgtagaagagtttataaacttaaaagggagtgaggggagggag
tggtataattatgtaaatacagtattcgtgtatgaaattctcaaaaaaaa
aatgtaaaggctaggcttaacaatgcacatttgtaatcccagctttggga
agtggagacgaaggagacgaaggatcctggggctttatggtcaaacagtc
tagttggtaggtgagctctggggggctcagtaatagaccgtctcaaaaaa
aaaaaaaaaaaaaaaaaaaaaaacaaggcagagattggttaaaaaaaaag
agagagacctgatgctgacctctggcctccaactagacatatggttgctc
acagagacattt
actaacctggcctcataagggactacagagactgaaccagggagcatgca
caggactcacctaggccctctgcacatatgtgacagatgtgcagcttggt
cttcatgtgggacccctaacagcaggagcaggggctgtttatcacactgt
tgcctgcctttgggaccctttcctcccacttggctgcctgttctagactc
agtaggagaagatgccctagtcttgcagcaacttgatatgcaaaggcttg
ttttatccacaggaggcctccccttttctgagaagaaagggaggaagatg
aggtttggggggtgtgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17528948_17529707
seq2: B6Ng01-075O02.b_48_809

seq1  GAATTCTCCCCTCCTCCCTCTCCTCTCCCCCTTCTCCCTGTCCTACTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCTCCTCCCTCTCCTCTCCCCCTTCTCCCTGTCCTACTCCT  50

seq1  CACTTGTATTCTGAAAGGACCCCAGCATTCCCCTTTCTACTTCCTCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTATTCTGAAAGGACCCCAGCATTCCCCTTTCTACTTCCTCACAT  100

seq1  AATTTACTTATTAGTAGGTATAGTTAATATCTAAATAACTCTAAATCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTTATTAGTAGGTATAGTTAATATCTAAATAACTCTAAATCCTG  150

seq1  TATTATTGCTGGTTTTTTTTTAAGGAATTAGGGGTCTAAAGAGAGATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGCTGGTTTTTTTTTAAGGAATTAGGGGTCTAAAGAGAGATCAC  200

seq1  TGGATAAAGTCCTAAGTGCATAAGCCTAAGGACCTGAGTTCAAATCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAGTCCTAAGTGCATAAGCCTAAGGACCTGAGTTCAAATCTCTA  250

seq1  CCACCCATGTTTCTTTTTTTAAAAAAGCTCCGCCTTCCCTAAGAGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATGTTTCTTTTTTTAAAAAAGCTCCGCCTTCCCTAAGAGTTTAT  300

seq1  CTAATTCCAAATGGCCAGTCCTAAACACTTGTACATATAAGCAACTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCCAAATGGCCAGTCCTAAACACTTGTACATATAAGCAACTGTAA  350

seq1  ATGGACTTGGTAGTTTGTATGTTTGTGTGTGCATGTGTGTGTATGTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTGGTAGTTTGTATGTTTGTGTGTGCATGTGTGTGTATGTAGGA  400

seq1  CAATAGTTGTAGAAGAGTTTATAAACTTAAAAGGGAGTGAGGGGAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTTGTAGAAGAGTTTATAAACTTAAAAGGGAGTGAGGGGAGGGAG  450

seq1  TGGTATAATTATGTAAATACAGTATTCGTGTATGAAATTCTCAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAATTATGTAAATACAGTATTCGTGTATGAAATTCTCAAAAAAAA  500

seq1  AATGTAAAGGCTAGGCTTAACAATGCACATTTGTAATCCCAGCTTTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAGGCTAGGCTTAACAATGCACATTTGTAATCCCAGCTTTGGGA  550

seq1  AGTGGAGACGAAGGAGACGAAGGATCCTGGGGCTTTATGGTCAAACAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGACGAAGGAGACGAAGGATCCTGGGGCTTTATGGTCAAACAGTC  600

seq1  TAGTTGGTAGGTGAGCTCTGGGGGGCTCAGTAATAGACCGTCTC-AAAAA  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGTTGGTAGGTGAGCTCTGGGGGGCTCAGTAATAGACCGTCTCAAAAAA  650

seq1  AAAAAAAAAAAAAAAAAAAAAAACAAGGCAGAGATTGGTT-AAAAAAAAG  698
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAACAAGGCAGAGATTGGTTAAAAAAAAAG  700

seq1  AGAGAGACCTGATGCTGACCTCTGGCCTCCAACTAGACATATGGTTGCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACCTGATGCTGACCTCTGGCCTCCAACTAGACATATGGTTGCTC  750

seq1  ACAGAGACATGT  760
      |||||||||| |
seq2  ACAGAGACATTT  762