BAC Information

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BAC

Clone NameB6Ng01-076K09
ChromosomeX (Build37)6 (Build37)
Map Location 147,341,418 - 147,342,338129,456,371 - 129,456,414
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC382244, LOC100039669, EG666982, EG624631, EG546387, LOC333588, Tmem29, LOC100040101, Alas2, Apex2, Pfkfb1, Tro, LOC100039716, Maged2, Itih5l
Downstream geneLOC667021, Gnl3l, Fgd1, Tsr2, LOC100040221, EG667027, Wnk3, LOC675278, ORF34, LOC623804, LOC100039760, Phf8, LOC385448, LOC237116, Huwe1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076K09.bB6Ng01-076K09.g
ACCDH892856DH892857
length925809
definitionDH892856|Mus musculus domesticus DNA, BAC clone: B6Ng01-076K09, 5' end.DH892857|Mus musculus domesticus DNA, BAC clone: B6Ng01-076K09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(147,341,418 - 147,342,338)(129,456,371 - 129,456,414)
sequence
gaattctgatagcaatattttcaagttgtatttgagactcaaatcttatg
atgataatcagggtagatgaccactgtaattcctgctgtgatgagttatc
accacagaaatttatattaatcaaatatttggtattttattattttcttt
ggttctggtttgggaaactgtatctcctgctgagcagttataagttggtt
tatgtctattttgttatcatcattatagtaaatgaacaattgcacattat
actaagaatgtttccatatgtaagaagtgtggactgttgataacatctat
catgacatttaaccttgtgttttgacattttgagattcaaatatatgaaa
atagaaaaaataacaaccatcacatggaatgaaaagcaaatttcgaagac
agtagattttaagtcttctccttacagaacgatgggtgcaatatgcaaga
gaattggctttacttaaccactcacaacgtgcacatagttctttttttgt
tttgttttgtttttttttgtttttgttttttttcgagatagggtttctct
gtgcagccctggctgtcctggaactcattttgtagaccaggctggcctcg
aactcagaaatccgcctgcctccctcacatagttctttattaaatttttc
attgtgaagtttataatatgatatcatataatacatatagacagcaatag
tcatattataaagtaaaacagtatatccattaccccacacaattaaccta
ttttgtgtgtgtgtgtatgtgtgtagacagcaggtgacatctcattttat
catgaaaaaagatcctaactctttttttttttattaaggatattcttttt
ttttccatttttttattaggtatttagctcatttacattcccaatgctat
aaccgaaagttcccatatcccaccc
gaattctcaggcaaatggatggaactagaaaatatcatcctgaggtaacc
cagacccaaaaggaaataaatacatggtatgtactcattgataagtgggt
atagcccaaaagcttggaatacccaagatacaattcacagactacatgaa
gctcaagaagaaggaagaccaaaatacccataggaagagatacagagaca
aagtatgcagcagagactgaaggaaagaccatccagagactgccccacct
ggtgatccatcccaaatacagttactaaacccagtcactgttgtggatac
caagaagtgcttgctgacaggaacctgatacagctatcacctgagaggat
ctgcctgagcctgacaagtaaagaggtggatgcttgcagccaacattgta
ctgagcacagcgtccccaatggaggagttagagaaaggactgaaggagct
gaaggggtttgcaaccccataggaagaacaacaatatcaaccaattagac
accccccagagcccccagggactaaactaccaaccaaagtatgcatatgg
agggacccctgattccagctgcatatgtagccaaggatggtcttatctgg
catcaatgggaggggaggtccttgtccctgtgaaggcttgatgccccagc
ttagggaaatgctagggcagtgaggcaggagtgggtggggaagcaccctc
atagaaagcacaggggagtgactgggatagggtgatttcagaggagaaac
ccggaaggggataagatttgaaatgtaaatacaaaatatctaataaaaaa
ttcccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_147341418_147342338
seq2: B6Ng01-076K09.b_44_968 (reverse)

seq1  GGGT-GGATATGGGGGACTTTCGG-TATAGCATTGGAAATGTAAATGAGC  48
      |||| |||||| ||| |||||||| ||||||||||| |||||||||||||
seq2  GGGTGGGATAT-GGGAACTTTCGGTTATAGCATTGGGAATGTAAATGAGC  49

seq1  TAAATACCTAATAAAAAATGGAAAAAAAAAAGAATAT-CTTAAGTAAAAA  97
      ||||||||||||||||||  | ||||||||||||||| |||||  |||||
seq2  TAAATACCTAATAAAAAAATGGAAAAAAAAAGAATATCCTTAATAAAAAA  99

seq1  AAAAAGAGTTAGGATC-TTTTTCATGAT-AAATGAGATGTCACCTGCTGT  145
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  AAAAAGAGTTAGGATCTTTTTTCATGATAAAATGAGATGTCACCTGCTGT  149

seq1  CTACACACATACACACACACAC-AAATAGGTTAATTGTGTGGGGTAATGG  194
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTACACACATACACACACACACAAAATAGGTTAATTGTGTGGGGTAATGG  199

seq1  ATATACTGTTTTACTTTATAATATGACTATTGCTGTCTATATGTATTATA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGTTTTACTTTATAATATGACTATTGCTGTCTATATGTATTATA  249

seq1  TGATATCATATTATAAACTTCACAATGAAAAATTTAATAAAGAACTATGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCATATTATAAACTTCACAATGAAAAATTTAATAAAGAACTATGT  299

seq1  GAGGGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAAT  349

seq1  GAGTTCCAGGACAGCCAGGGCTGCACAGAGAAACCCTATCTCGAAAAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGGGCTGCACAGAGAAACCCTATCTCGAAAAAAA  399

seq1  ACAAAAACAAAAAAAAACAAAACAAAACAAAAAAAGAACTATGTGCACGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAAAAAAAACAAAACAAAACAAAAAAAGAACTATGTGCACGT  449

seq1  TGTGAGTGGTTAAGTAAAGCCAATTCTCTTGCATATTGCACCCATCGTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGGTTAAGTAAAGCCAATTCTCTTGCATATTGCACCCATCGTTC  499

seq1  TGTAAGGAGAAGACTTAAAGTCTACTGTCTTCGAAATTTGCTTTTCATTC  544
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTAAGGAGAAGACTTAAAATCTACTGTCTTCGAAATTTGCTTTTCATTC  549

seq1  CATGTGATGGTTGTTATTTTTTCTATTTTCATATATTTGAATCTCAAAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATGGTTGTTATTTTTTCTATTTTCATATATTTGAATCTCAAAAT  599

seq1  GTCAAAACACAAGGTTAAATGTCATGATAGATGTTATCAACAGTCCACAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAACACAAGGTTAAATGTCATGATAGATGTTATCAACAGTCCACAC  649

seq1  TTCTTACATATGGAAACATTCTTAGTATAATGTGCAATTGTTCATTTACT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACATATGGAAACATTCTTAGTATAATGTGCAATTGTTCATTTACT  699

seq1  ATAATGATGATAACAAAATAGACATAAACCAACTTATAACTGCTCAGCAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATGATAACAAAATAGACATAAACCAACTTATAACTGCTCAGCAG  749

seq1  GAGATACAGTTTCCCAAACCAGAACCAAAGAAAATAATAAAATACCAAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAGTTTCCCAAACCAGAACCAAAGAAAATAATAAAATACCAAAT  799

seq1  ATTTGATTAATATAAATTTCTGTGGTGATAACTCATCACAGCAGGAATTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTAATATAAATTTCTGTGGTGATAACTCATCACAGCAGGAATTA  849

seq1  CAGTGGTCATCTACCCTGATTATCATCATAAGATTTGAGTCTCAAATGAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGTGGTCATCTACCCTGATTATCATCATAAGATTTGAGTCTCAAAT-AC  898

seq1  AACTTGAAAATATTGCTATCAGAATTC  921
      |||||||||||||||||||||||||||
seq2  AACTTGAAAATATTGCTATCAGAATTC  925

seq1: chr6_129456371_129456414
seq2: B6Ng01-076K09.g_836_879 (reverse)

seq1  TTTTGG--ATTTTTTATTAGATATTTTCTTCATTTACATTTCAAAT  44
      ||||||  ||||||||||||||||||| |  |||||||||||||||
seq2  TTTTGGGAATTTTTTATTAGATATTTTGT--ATTTACATTTCAAAT  44