BAC Information

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BAC

Clone NameB6Ng01-079O12
Chromosome6 (Build37)
Map Location 68,589,934 - 68,590,346
singlet/doubletsinglet
Overlap geneIgk
Upstream geneEG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96
Downstream geneIgkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516, Gm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077, Igkv13-57-2, Gm1418, Igkv13-57-1, Gm189, Igkv13-56-1, Igkv4-56, Igkv13-55-1, Gm1524, Igkv13-54-1, Igkv4-54
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079O12.bB6Ng01-079O12.g
ACCDH895187DH895188
length407407
definitionDH895187|Mus musculus domesticus DNA, BAC clone: B6Ng01-079O12, 5' end.DH895188|Mus musculus domesticus DNA, BAC clone: B6Ng01-079O12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgatggtgatgcttttgtatgttttttctgttctctttcagagg
cagtggatctattatatgtcattctcaccactagcagccttgggattcaa
gttataatataaattacacagacatacagctcagtatccatgcaccaaca
tctggagtggagactattccctaaagatatagtctgactcttgtgttcgt
tccccagcaagactaacttgtctggctccagaaggagaggacatgcccaa
ttctgcagagactggttgcaacatagtcgggtgatatccaaaggacccca
ccctctcagaggagaagcaggtggtaaaggaaggattctgtgaggggtgg
acctgaagaggggggagtttggggatgtaaataatagatagataggtaga
tagatag
actctagagacaacactgttgtttccatggcaatggcagattcatctgca
cacctagccttctgctccttttattcagagcaaaatcccattaagcagca
tccagcaatattagcaaggcagagacatttaaaaagtgatctggtagcca
ccattctgctcacaggccttttataagctctgtaatggatctgtaagtcc
ctgggggcctggagactaaaccaccaaccaaagagtacacatggtgggac
tcatggctccagctgcatatttagcagaggatggcctagttggtcatcaa
tgggaggagaggccgttggtcctatgaaggctctatgtcctagtgtaggg
gaatgccagggccctgaagtaggagtgggtgggttgttaagctgggggag
ggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_68589934_68590346
seq2: B6Ng01-079O12.g_70_482

seq1  GAATTCACTCTAGAGACAACACTGTTGTTTCCATGGCAATGGCAGATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTAGAGACAACACTGTTGTTTCCATGGCAATGGCAGATTCA  50

seq1  TCTGCACACCTAGCCTTCTGCTCCTTTTATTCAGAGCAAAATCCCATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACCTAGCCTTCTGCTCCTTTTATTCAGAGCAAAATCCCATTAA  100

seq1  GCAGCATCCAGCAATATTAGCAAGGCAGAGACATTTAAAAAGTGATCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCCAGCAATATTAGCAAGGCAGAGACATTTAAAAAGTGATCTGG  150

seq1  TAGCCACCATTCTGCTCACAGGCCTTTTATAAGCTCTGTAATGGATCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACCATTCTGCTCACAGGCCTTTTATAAGCTCTGTAATGGATCTGT  200

seq1  AAGTCCCTGGGGGCCTGGAGACTAAACCACCAACCAAAGAGTACACATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTGGGGGCCTGGAGACTAAACCACCAACCAAAGAGTACACATGG  250

seq1  TGGGACTCATGGCTCCAGCTGCATATTTAGCAGAGGATGGCCTAGTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCATGGCTCCAGCTGCATATTTAGCAGAGGATGGCCTAGTTGGT  300

seq1  CATCAATGGGAGGAGAGGCCGTTGGTCCTATGAAGGCTCTATGTCCTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGGGAGGAGAGGCCGTTGGTCCTATGAAGGCTCTATGTCCTAGT  350

seq1  GTAGGGGAATGCCAGGGCCCTGAAGTAGGAGTGGGTGGGTTGTTAAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGGAATGCCAGGGCCCTGAAGTAGGAGTGGGTGGGTTGTTAAGCTG  400

seq1  GGGGAGGGGGGGT  413
      |||||||||||||
seq2  GGGGAGGGGGGGT  413