BAC Information

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BAC

Clone NameB6Ng01-081E12
Chromosome6 (Build37)
Map Location 26,767,972 - 26,768,429
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626912, LOC100041210
Downstream geneLOC100041247, Grm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081E12.bB6Ng01-081E12.g
ACCDH896180DH896181
length472379
definitionDH896180|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E12, 5' end.DH896181|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gttttaagctttttttgttttttattttttttttttttttccccttttgg
ctttttgagacagggtttctctgtgtagccctgactgtcctggaactcac
tttgtagaccaggctggcctcgaactcagaaatctgcctgcctctatctc
ccaggtgctgggattaaaggcgtgtgccaccacgcccagctgttctcttg
ttttaactgtttaagaaagcacaatatgaactgatggggttttttgtttg
tttgtttgtttgtttgtttgtttgttttttgagaactaatcaatgtcatt
gctttcttgcacactaatttcataagaaatatttacagaggaaaataatg
gcaattctggactactgaatgtttcatacttgaattaagcaggcactcca
aatacaaaaagcagaatgaagaagtttgcggtttccccattattttgcac
tgggaatatctggacttctata

tcctctggaaagaacccagatatccctcacaaagaaatagatatggaaaa
gttggtatagttatacaatagagtattaaaaattcagatattaaaaacaa
tgcttcatgaaattctcaggcaaatggatggatctagaaaatattaccct
gagtgaggtaactcagtcacaaaaagagcacacatgatatgtactcactg
acaagtggatattaggtaaagagcatggaatattaatgatataactcagg
gaccacatgaaggtcaagaggaaggaagtcaaagtggatgcttcagttat
ccttagtaggtggaacaatataatcaaggaaagtagagggtaggagggac
ttgggaggaatagaggaggtagagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26767972_26768429
seq2: B6Ng01-081E12.b_13_472

seq1  TTTTG-TTTTTGTTTTTGTTTTTTTTTTCCCC-TTTGGCTTTTTGAGACA  48
      ||||| ||||| ||||| |||||||||||||| |||||||||||||||||
seq2  TTTTGTTTTTTATTTTTTTTTTTTTTTTCCCCTTTTGGCTTTTTGAGACA  50

seq1  GGGTTTCTCTGTGTAGCCCTGACTGTCCTGGAACTCACTTTGTAGACCAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTGTAGCCCTGACTGTCCTGGAACTCACTTTGTAGACCAG  100

seq1  GCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTATCTCCCAGGTGCTGGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTATCTCCCAGGTGCTGGG  150

seq1  ATTAAAGGCGTGTGCCACCACGCCCAGCTGTTCTCTTGTTTTAACTGTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCGTGTGCCACCACGCCCAGCTGTTCTCTTGTTTTAACTGTTT  200

seq1  AAGAAAGCACAATATGAACTGATGGGGTTTTTTGTTTGTTTGTTTGTTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCACAATATGAACTGATGGGGTTTTTTGTTTGTTTGTTTGTTTG  250

seq1  TTTGTTTGTTTGTTTTTTGAGAACTAATCAATGTCATTGCTTTCTTGCAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTTTTGAGAACTAATCAATGTCATTGCTTTCTTGCAC  300

seq1  ACTAATTTCATAAGAAATATTTACAGAGGAAAATAATGGCAATTCTGGAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTCATAAGAAATATTTACAGAGGAAAATAATGGCAATTCTGGAC  350

seq1  TACTGAATGTTTCATACTTGAATTAAGCAGGCACTCCAAATACAAAAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAATGTTTCATACTTGAATTAAGCAGGCACTCCAAATACAAAAAGC  400

seq1  AGAATGAAGAAGTTTGCGGTTTCCCCATTATTTTGCACTGGGAATATCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAGAAGTTTGCGGTTTCCCCATTATTTTGCACTGGGAATATCTG  450

seq1  GACTTCTATA  458
      ||||||||||
seq2  GACTTCTATA  460


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