BAC Information

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BAC

Clone NameB6Ng01-082D15
Chromosome6 (Build37)16 (Build37)
Map Location 18,835,452 - 18,835,96847,633,166 - 47,634,209
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082D15.bB6Ng01-082D15.g
ACCDH896845DH896846
length9941,040
definitionDH896845|Mus musculus domesticus DNA, BAC clone: B6Ng01-082D15, 5' end.DH896846|Mus musculus domesticus DNA, BAC clone: B6Ng01-082D15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(47,633,166 - 47,634,209)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtcgaccttattgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaaaaatcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcctctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatgttttttgctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctacgttttttgttattccagatg
aatttccaaattgctccttctaactcgttgaaggattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatccttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatatttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttctcagc
gaattcttcataggcatctactctagattactgagttcctgatttaattg
cttcttggatgggtgagctggtgtattagcatatctaaactgagggttag
gatttacacagtgttacttgggaatgcagctgaaagcatattttgtttag
gattattacttttgtatgtatttatttcttagatgtataaactgtgacct
ctatcttgagttcagtgcagtaaaatcttccacaggctgaaaaatagtag
aaagtccagccagagcagtataaaatataatatggtttttccataattat
gttgtaattctgttagaacaaaagcatttctgttgtgagccatgttttca
gacacttgccttaaatttctagagaaagggaaactatttattttagctaa
gattattttattcttggcatgtactcaaaaagtctaatatttcctggctg
gtttttaaaagggggaaatatattttacacatacacacacacacacacac
acacacacacacacaattccagatatatgtatcttttattatcagagcct
tttcaatttcagagccagaaaaatcctgaatttataagcttcctgaagct
gatgtaagactacaaatattcaccctgaacctccaaacaagtatgaggag
ttcataaggctttgattttattttgagattcatttatgactacaaataca
tacaatagctctttatggcaagaataattgttctgtatttactttttaag
tggtccttagtgtggtacccactccagtgtcttttctttggcaatagagt
caaaagttcaaatattctgagaggctaagattttgtaaatagacaaatat
gcaccacatcatgacccttatatttcacattcatatgtactattcccaga
aaagtaagtggttcttgcattccctgctcagaacatagtatggaggaatt
gtttctcactggtcaaactttttctcagaaatggactgaaatgaaactgc
attatcaacaaagtaccatttgagctacgttgtgttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-082D15.b_55_572 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCAAAAAACATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGA  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| ||| |||| || | ||   
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTACTGTAAGATCGATTT  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      | ||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAAGGTCGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr16_47633166_47634209
seq2: B6Ng01-082D15.g_68_1107

seq1  GAATTCTTCATAGGCATCTACTCTAGATTACTGAGTTCCTGATTTAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATAGGCATCTACTCTAGATTACTGAGTTCCTGATTTAATTG  50

seq1  CTTCTTGGATGGGTGAGCTGGTGTATTAGCATATCTAAACTGAGGGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGATGGGTGAGCTGGTGTATTAGCATATCTAAACTGAGGGTTAG  100

seq1  GATTTACACAGTGTTACTTGGGAATGCAGCTGAAAGCATATTTTGTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACACAGTGTTACTTGGGAATGCAGCTGAAAGCATATTTTGTTTAG  150

seq1  GATTATTACTTTTGTATGTATTTATTTCTTAGATGTATAAACTGTGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTACTTTTGTATGTATTTATTTCTTAGATGTATAAACTGTGACCT  200

seq1  CTATCTTGAGTTCAGTGCAGTAAAATCTTCCACAGGCTGAAAAATAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGAGTTCAGTGCAGTAAAATCTTCCACAGGCTGAAAAATAGTAG  250

seq1  AAAGTCCAGCCAGAGCAGTATAAAATATAATATGGTTTTTCCATAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCAGCCAGAGCAGTATAAAATATAATATGGTTTTTCCATAATTAT  300

seq1  GTTGTAATTCTGTTAGAACAAAAGCATTTCTGTTGTGAGCCATGTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAATTCTGTTAGAACAAAAGCATTTCTGTTGTGAGCCATGTTTTCA  350

seq1  GACACTTGCCTTAAATTTCTAGAGAAAGGGAAACTATTTATTTTAGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTGCCTTAAATTTCTAGAGAAAGGGAAACTATTTATTTTAGCTAA  400

seq1  GATTATTTTATTCTTGGCATGTACTCAAAAAGTCTAATATTTCCTGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTTATTCTTGGCATGTACTCAAAAAGTCTAATATTTCCTGGCTG  450

seq1  GTTTTTAAAAGGGGGAAATATATTTTACACATACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAAAGGGGGAAATATATTTTACACATACACACACACACACACAC  500

seq1  ACACACACACACACAATTCCAGATATATGTATCTTTTATTATCAGAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACAATTCCAGATATATGTATCTTTTATTATCAGAGCCT  550

seq1  TTTCAATTTCAGAGCCAGAAAAATCCTGAATTTATAAGCTTCCTGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTCAGAGCCAGAAAAATCCTGAATTTATAAGCTTCCTGAAGCT  600

seq1  GATGTAAGACTACAAATATTCACCCTGAACCTCCAAACAAGTATGAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAGACTACAAATATTCACCCTGAACCTCCAAACAAGTATGAGGAG  650

seq1  TTCATAAGGCTTTGATTTTATTTTGAGATTCATTTATGACTACAAATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGGCTTTGATTTTATTTTGAGATTCATTTATGACTACAAATACA  700

seq1  TACAATAGCTC-TTATGGCAAGAATAATTGTTCTGTATTTACTTTTTAAG  749
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TACAATAGCTCTTTATGGCAAGAATAATTGTTCTGTATTTACTTTTTAAG  750

seq1  TGGTCCTTAGTGTGGTACCCACTCCAGTGTCTTTTCTTTGGCAATAGAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTAGTGTGGTACCCACTCCAGTGTCTTTTCTTTGGCAATAGAGT  800

seq1  CAAAAGTTCAAATATTCTGAGAGGCTAAGATATTGTAAATAGACAAAATA  849
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  CAAAAGTTCAAATATTCTGAGAGGCTAAGATTTTGTAAATAGAC-AAATA  849

seq1  TGCACCACATCATGACCCTTATATTTCACATTCATATGTACTATT-CCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCACCACATCATGACCCTTATATTTCACATTCATATGTACTATTCCCAG  899

seq1  AAAAGTAAGTGGTTCTTGCATTCCCTGCTCAGAACATAGTATGGAGGAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAGTGGTTCTTGCATTCCCTGCTCAGAACATAGTATGGAGGAAT  949

seq1  TGTTTTCTCACTGGTCATAACTTTTTCTCAGGAAATGGACTGAATTGACA  998
      || |||||||||||||| |||||||||||| ||||||||||||| ||| |
seq2  TG-TTTCTCACTGGTCA-AACTTTTTCTCA-GAAATGGACTGAAATGAAA  996

seq1  CTGCATTATCAACAAAGTACCCATTTGGAGCTACGTTGTGTTCTTT  1044
      ||||||||||||||||||| |||||| |||||||||||||||||||
seq2  CTGCATTATCAACAAAGTA-CCATTT-GAGCTACGTTGTGTTCTTT  1040