BAC Information

Click to search

BAC

Clone NameB6Ng01-082K08
Chromosome6 (Build37)
Map Location 21,107,090 - 21,107,526
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040838
Downstream geneKcnd2, LOC100041343, Tspan12, LOC100041358, Ing3, A430107O13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082K08.bB6Ng01-082K08.g
ACCDH897138DH897139
length4371,018
definitionDH897138|Mus musculus domesticus DNA, BAC clone: B6Ng01-082K08, 5' end.DH897139|Mus musculus domesticus DNA, BAC clone: B6Ng01-082K08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgatggttaacaccaaagagagttattttcctttcctctggcaa
aaggtgtgtatggctctggtgactatcaacacgttaaagcctatgctggc
ttgaaggcttccttcagtcactattcataaaacccactatatatttgaag
tgcttgtgagcatttgtcttatctttcttataatccatatgattttgcca
cactatcctttcatagccctgcctgatggtttacaaaatgacaaagaagt
ataagatatgtgctatggggctgtggtggggtgtggggaaagggaaggtc
tcagtgggcccatgcccaggcatccctttcttctgagggactagccacag
gacagtatagtatagaacagtttattcagggcatggggagaggagttaag
agggtagtagaggcagagaaaggcagagaggagggag
gaattccccaaacctatgcacctcccttttacctctaatagggttctctc
cctgggtcccagggctccagccacatatgtggcagaggatgtcattgttg
gacatcagaggaaggagtggcccttgggcctgaggggttttgatacccca
gtgtaggtgaatgccatagcaggaacgtgggagtaggtggataggacaac
acccatcatagaggcagggggagagagaaaggaggaggggatttccagag
gagagatctggaaaggatataacatttgaaatgtaaataaaggaaatatc
caataaaagaaaaataaaagatgtttctctcccacccacccatgtaccca
ctcccacttcacccttctagcatcccccttctctggggcttctctgctac
atatgtagcaggagtcatggaccagtctttgtatactttttggatggtgg
tttattctctagaagctctaaggggctcaattaattgatactgttgattt
ttctgtgggattgcaatccctttcaacacctttaacacttcctctaactc
ttccactgccatcccaggggtcagtccaatgtttggctgtgagtttctgc
atttgtatccatcaggtgctggcagatactctcagaggacagccatacca
ggcatttgtctgtaagcacatcttggcatcagcaatagtgttggggtttt
atgtctgctgatgaaatggatagcataatgggggaagtctctggatggcc
tttctttcagcctcttcaccattttgtccctgcatttcctttagataggg
ataattctgggtttacatattttagatgggtgggtgacaccatccttacg
tgtgattcatgtctatctactggaggtagtcctcttcacgttctatctcc
ctgctttgggtattttgctaatgtcatcttcactaggacctgggcactct
ctctggaatctggaactttctagttgtttctccaggctcccaagcctaca
caactacttatttctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_21107090_21107526
seq2: B6Ng01-082K08.b_46_482 (reverse)

seq1  CTCCCTCCTCTCTGCCTTTCTCTGCCTCTACTACCCTCTTAACTCCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCTCTCTGCCTTTCTCTGCCTCTACTACCCTCTTAACTCCTCTC  50

seq1  CCCATGCCCTGAATAAACTGTTCTATACTATACTGTCCTGTGGCTAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCCCTGAATAAACTGTTCTATACTATACTGTCCTGTGGCTAGTCC  100

seq1  CTCAGAAGAAAGGGATGCCTGGGCATGGGCCCACTGAGACCTTCCCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGAAAGGGATGCCTGGGCATGGGCCCACTGAGACCTTCCCTTTC  150

seq1  CCCACACCCCACCACAGCCCCATAGCACATATCTTATACTTCTTTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCCCACCACAGCCCCATAGCACATATCTTATACTTCTTTGTCAT  200

seq1  TTTGTAAACCATCAGGCAGGGCTATGAAAGGATAGTGTGGCAAAATCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAACCATCAGGCAGGGCTATGAAAGGATAGTGTGGCAAAATCATA  250

seq1  TGGATTATAAGAAAGATAAGACAAATGCTCACAAGCACTTCAAATATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTATAAGAAAGATAAGACAAATGCTCACAAGCACTTCAAATATATA  300

seq1  GTGGGTTTTATGAATAGTGACTGAAGGAAGCCTTCAAGCCAGCATAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTTTATGAATAGTGACTGAAGGAAGCCTTCAAGCCAGCATAGGCT  350

seq1  TTAACGTGTTGATAGTCACCAGAGCCATACACACCTTTTGCCAGAGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGTGTTGATAGTCACCAGAGCCATACACACCTTTTGCCAGAGGAAA  400

seq1  GGAAAATAACTCTCTTTGGTGTTAACCATCAGAATTC  437
      |||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAACTCTCTTTGGTGTTAACCATCAGAATTC  437