BAC Information

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BAC

Clone NameB6Ng01-082O11
Chromosome6 (Build37)
Map Location 94,277,711 - 94,430,084
singlet/doubletdoublet
Overlap geneLOC100043262, LOC665856
Upstream geneLOC665831, Magi1
Downstream geneSlc25a26, Lrig1, LOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912, Suclg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082O11.bB6Ng01-082O11.g
ACCDH897318DH897319
length1,146657
definitionDH897318|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O11, 5' end.DH897319|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,277,711 - 94,278,867)(94,429,569 - 94,430,084)
sequence
gaattctctctccagcacttagaagcactttttcccaactctggatcttt
cttccacttaagtttcagctgacattaaggattgttttagagactcttgt
atttgattttgccttctactagaaagactgatatgaaacaggtagggaca
aaggccagggtactagtttgaaagagaatggtccccacaggcgcatgtat
ttgcatgcttaatccccagctgattggaaggacttggaggtgtccttgtt
ggaggaggcatgttgctgagtggcctttgaggtctctacaaaaccacacc
agggtctctctttccccctgctgtttaaggatcaggatatgaagctctcg
gttactgctccagggtcatgcctgtctatttgccaccatgacgataacag
gctagccctctgaaactataagcaagctcccagttaaatgcttccttata
taagagttgccttggtcatagtgtcccttcacaacagtagaacacatatg
catacacaatttattgaacactgggaagtcaagctggtgcctacatagag
acatagagtcttcacctctgttctaagtgtctttggtagaggaagttact
ttgcatgctactaaaggagaaatgtaggcccccaaagcagagactaatac
tactgttctttaaaaaaaaagaaaaaaaaaagaaaaaaaagagtagcaat
aaaattattcttaatggcattgtgttatacccatagatcagtgccttggt
cagccatcctcagagaagctttcttgtgcagtaggtaggaataaatagag
agacccacagccagacagcatgcagagagtaagaaatcttggaacactca
cccctaaatgtgatgttttcatcaaatccctaggatttccagagaaccct
aggaaaaggaagtggagaaagtacaagagccagacaggatggagacacca
actaggccctccaccacatgatcaccacatatgattcacagagactgggg
ggagcatgcacaagccagattgggtctgcatcagatggttctccgaccta
tgtagaagtgggcaccatggcctaatcctactccagagcatctccagtca
ataatcacttggccatgaaatcacatacttcttctcctctttttac
gaattcctcattctcctgtctcagcctccctagtgctagaattacaggct
atcagcacaccaggccaggcttgtgcagtgctggagatagatcaagccta
ggtcctcatgttctagtttcatgtctgtggctgtgataaatactctggta
cagacaaacaacttaggggaggaaagacgtttttttttgtttttttgttt
gtttgtttgtttgtttgtttgtttgttttttggcttacaattcaaggtta
cagtccattattgcagggaaattaaggcaggaacttaaaaaaaaaatcac
atccacagccaagagcagagtagatcaagcaacagcaagggaggggagag
agagagagagagagagagagagagagagagagagaacagatccttccttg
cttgttctcacctagattctaggtttctcctgtcttcaggacaacaacac
ccccacacacacacctagggaatggtgctgcccacagtgaacaatgggac
aggtcttcctacatcaattaaccattaagacaatttcctacaggcaaata
tgatctagacagttttcgacagtttcttgattgaggctctccttttttag
gtgattctacatagtggcaacctgacaaaaactaaccacggctgtatgct
tgctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_94277711_94278867
seq2: B6Ng01-082O11.b_51_1196

seq1  GAATTCTCTCTCCAGCACTTAGAAGCACTTTTTCCCAACTCTGGATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCCAGCACTTAGAAGCACTTTTTCCCAACTCTGGATCTTT  50

seq1  CTTCCACTTAAGTTTCAGCTGACATTAAGGATTGTTTTAGAGACTCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTTAAGTTTCAGCTGACATTAAGGATTGTTTTAGAGACTCTTGT  100

seq1  ATTTGATTTTGCCTTCTACTAGAAAGACTGATATGAAACAGGTAGGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTTGCCTTCTACTAGAAAGACTGATATGAAACAGGTAGGGACA  150

seq1  AAGGCCAGGGTACTAGTTTGAAAGAGAATGGTCCCCACAGGCGCATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGGGTACTAGTTTGAAAGAGAATGGTCCCCACAGGCGCATGTAT  200

seq1  TTGCATGCTTAATCCCCAGCTGATTGGAAGGACTTGGAGGTGTCCTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGCTTAATCCCCAGCTGATTGGAAGGACTTGGAGGTGTCCTTGTT  250

seq1  GGAGGAGGCATGTTGCTGAGTGGCCTTTGAGGTCTCTACAAAACCACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGCATGTTGCTGAGTGGCCTTTGAGGTCTCTACAAAACCACACC  300

seq1  AGGGTCTCTCTTTCCCCCTGCTGTTTAAGGATCAGGATATGAAGCTCTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCTCTTTCCCCCTGCTGTTTAAGGATCAGGATATGAAGCTCTCG  350

seq1  GTTACTGCTCCAGGGTCATGCCTGTCTATTTGCCACCATGACGATAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGCTCCAGGGTCATGCCTGTCTATTTGCCACCATGACGATAACAG  400

seq1  GCTAGCCCTCTGAAACTATAAGCAAGCTCCCAGTTAAATGCTTCCTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCCTCTGAAACTATAAGCAAGCTCCCAGTTAAATGCTTCCTTATA  450

seq1  TAAGAGTTGCCTTGGTCATAGTGTCCCTTCACAACAGTAGAACACATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTGCCTTGGTCATAGTGTCCCTTCACAACAGTAGAACACATATG  500

seq1  CATACACAATTTATTGAACACTGGGAAGTCAAGCTGGTGCCTACATAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAATTTATTGAACACTGGGAAGTCAAGCTGGTGCCTACATAGAG  550

seq1  ACATAGAGTCTTCACCTCTGTTCTAAGTGTCTTTGGTAGAGGAAGTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGTCTTCACCTCTGTTCTAAGTGTCTTTGGTAGAGGAAGTTACT  600

seq1  TTGCATGCTACTAAAGGAGAAATGTAGGCCCCCAAAGCAGAGACTAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGCTACTAAAGGAGAAATGTAGGCCCCCAAAGCAGAGACTAATAC  650

seq1  TACTGTTCTTTAAAAAAAAAGAAAAAAAAAAGAAAAAAAAGAGTAGCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTCTTTAAAAAAAAAGAAAAAAAAAAGAAAAAAAAGAGTAGCAAT  700

seq1  AAAATTATTCTTAATGGCATTGTGTTATACCCATAGATCAGTGCCTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATTCTTAATGGCATTGTGTTATACCCATAGATCAGTGCCTTGGT  750

seq1  CAGCCATCCTCAGAGAAGCTTTCTTGTGCAGTAGGTAGGAATAAATAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCCTCAGAGAAGCTTTCTTGTGCAGTAGGTAGGAATAAATAGAG  800

seq1  AGACCCACAGCCAGACAGCATGCAGAGAGTAAGAAATCTTGGAACACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACAGCCAGACAGCATGCAGAGAGTAAGAAATCTTGGAACACTCA  850

seq1  CCCCTAAATGTGATGTTTTCATCAAATCCCTAGGATTTCCAGAGAACCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAATGTGATGTTTTCATCAAATCCCTAGGATTTCCAGAGAACCCT  900

seq1  AGGAAAAGGAAGTGGAGAAAGTACAAGAGCCAGACAGGATGGAAGACACC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGAAAAGGAAGTGGAGAAAGTACAAGAGCCAGACAGGATGG-AGACACC  949

seq1  AACTAGGCCCTCCAACCAACATGATCACCACATATGAATTCAACAGAGAC  1000
      ||||||||||||||  | |||||||||||||||||| |||| ||||||||
seq2  AACTAGGCCCTCCA--CCACATGATCACCACATATG-ATTC-ACAGAGAC  995

seq1  T-GGGGGAGCATGCACAAGGCCAGATTGGGTCTGCATCAGATGGGTTCCT  1049
      | |||||||||||||||| ||||||||||||||||||||||| |||||  
seq2  TGGGGGGAGCATGCACAA-GCCAGATTGGGTCTGCATCAGAT-GGTTCTC  1043

seq1  CGAACTAATGTAGAAGTGGGCA-CATGGCCTATCCTTACTCCAGAAGCAA  1098
      ||| || ||||||||||||||| |||||||||  | |||||||| ||| |
seq2  CGACCT-ATGTAGAAGTGGGCACCATGGCCTAATCCTACTCCAG-AGC-A  1090

seq1  TCTCCAAGTC-ATAATCACTTGCCCATGAAAATCACATACCTTTCCTTCT  1147
      ||||| |||| ||||||||||| ||||| |||||||||||   | |||||
seq2  TCTCC-AGTCAATAATCACTTGGCCATG-AAATCACATAC---TTCTTCT  1135

seq1  -CTCTTTTTAC  1157
       ||||||||||
seq2  CCTCTTTTTAC  1146

seq1: chr6_94429569_94430084
seq2: B6Ng01-082O11.g_209_726 (reverse)

seq1  CAAAGCAAGCATACAGCCGTGGTTAGTTTTTGTCAGGTTGCCACTATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAGCATACAGCCGTGGTTAGTTTTTGTCAGGTTGCCACTATGTA  50

seq1  GAATCACCT-AAAAAGGAGAGCCTCAATCAAGAAACTGTCG-AAACTGTC  98
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  GAATCACCTAAAAAAGGAGAGCCTCAATCAAGAAACTGTCGAAAACTGTC  100

seq1  TAGATCATATTTGCCTGTAGGAAATTGTCTTAATGGTTAATTGATGTAGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCATATTTGCCTGTAGGAAATTGTCTTAATGGTTAATTGATGTAGG  150

seq1  AAGACCTGTCCCATTGTTCACTGTGGGCAGCACCATTCCCTAGGTGTGTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGTCCCATTGTTCACTGTGGGCAGCACCATTCCCTAGGTGTGTG  200

seq1  TGTGGGGGTGTTGTTGTCCTGAAGACAGGAGAAACCTAGAATCTAGGTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGGTGTTGTTGTCCTGAAGACAGGAGAAACCTAGAATCTAGGTGA  250

seq1  GAACAAGCAAGGAAGGATCTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCAAGGAAGGATCTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300

seq1  TCTCTCTCTCTCCCCTCCCTTGCTGTTGCTTGATCTACTCTGCTCTTGGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCCCCTCCCTTGCTGTTGCTTGATCTACTCTGCTCTTGGC  350

seq1  TGTGGATGTGATTTTTTTTTTAAGTTCCTGCCTTAATTTCCCTGCAATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATGTGATTTTTTTTTTAAGTTCCTGCCTTAATTTCCCTGCAATAA  400

seq1  TGGACTGTAACCTTGAATTGTAAGCCAAAAAACAAACAAACAAACAAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTAACCTTGAATTGTAAGCCAAAAAACAAACAAACAAACAAACA  450

seq1  AACAAACAAACAAAAAAACAAAAAAAAACGTCTTTCCTCCCCTAAGTTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAAAAAACAAAAAAAAACGTCTTTCCTCCCCTAAGTTGT  500

seq1  TTGTCTGTACCAGAGTAT  516
      ||||||||||||||||||
seq2  TTGTCTGTACCAGAGTAT  518