BAC Information

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BAC

Clone NameB6Ng01-082O18
Chromosome6 (Build37)
Map Location 104,459,880 - 104,460,586
singlet/doubletsinglet
Overlap geneCntn6
Upstream geneChl1, LOC666141, LOC100043345
Downstream geneLOC384470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082O18.bB6Ng01-082O18.g
ACCDH897332DH897333
length7641,160
definitionDH897332|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O18, 5' end.DH897333|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgatacctacaggagcaattaaatatttactcccagctgtaat
ctatatttcctaaattcttattgcattaactcatctgtatcactcaataa
tacaaagtgaactattccactaattcaggagaagagaatgagatgacctg
aagaatgacagcagcatctaccaatttcattttgataactaacagtatat
agctcactggacctatgcccatctatgcacacgctctggttagcagttga
gcttctgtggacctctataggcacaggttagttgattctatatgctttct
tgaggtatccttgacctccatgcctcctttaatccttcgtctccctcaac
cattgaattaccctacctctgactaatatttatttaactgtgggtctctg
catctgttttcatcagttcctgggtgaagcctctcagatgacagttatgc
taagtacctatctggaagtacaacagaatatcattatattatcagggatg
gcctctttccaaagctgagccagtctttggttggtgagtctctcaatttc
tgctgcaactttaccactgaacaacgtgttgataggagaaacctagggtc
taaagttttgtggctgggctggtatcccagtccctccgttggatgtcatt
tctggttacaggacacggttgtatcagtctccatatcctactttgctaga
aaccttaggagggccacccttttggatttctggagttaccattgtggatg
atttctagctcatc
gaattctgacctgaggaataccgaattgctgagagcacctgaaaaaattt
tcatcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaaaataaaaaattcaggtgacagca
gatactggcgaggatgtggaaaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaatcactctagaaatcagtctggagtttcctcag
aaaattgtacatagtactaccagaggatcccacaatacctctcctgggca
tatatccagaagatgttgcaaccggtaagaaggacacatgatccactatg
ttcatagcagccttatttataatagccagaagctggaaaggacccagatg
cccctcaacagaggaattgatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaaggatgaatttatgaaatttctaggcaaa
tggatggacctggagggtatcatcctgagtgaggtatcccaaactcaaaa
gaactcacacaatatgtactcactggtaagtggacattagctcagaaact
tagaatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaacaaagaccaaagtttggacactttgccccttcttagaattgggaa
caaaacactcatggaaggagttacagagacacagtttggagctgagatga
aaggatggaccatctagagactgccatatcccgggatccatcccataatc
agcctccaaacgctgacaccattgaatacactagcaagattttgctgaaa
ggacccagatataactgtctcttgtgaaactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctatggatgggttacagggccccatg
aggactagagaaagtatcaatgacctaaggattccacaccctataggtgg
aacaacattataactacccagtacccccagagctcgtgtttcttactgca
tattatcagagattgctagttgcatcatggaagagaggccattggtcatg
caacttgtctgcctcagtacaggaatgccagcgaaagtgcatgtgggtcg
tggaaatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_104459880_104460586
seq2: B6Ng01-082O18.b_47_753

seq1  GAATTCTTGATACCTACAGGAGCAATTAAATATTTACTCCCAGCTGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATACCTACAGGAGCAATTAAATATTTACTCCCAGCTGTAAT  50

seq1  CTATATTTCCTAAATTCTTATTGCATTAACTCATCTGTATCACTCAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTCCTAAATTCTTATTGCATTAACTCATCTGTATCACTCAATAA  100

seq1  TACAAAGTGAACTATTCCACTAATTCAGGAGAAGAGAATGAGATGACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTGAACTATTCCACTAATTCAGGAGAAGAGAATGAGATGACCTG  150

seq1  AAGAATGACAGCAGCATCTACCAATTTCATTTTGATAACTAACAGTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGACAGCAGCATCTACCAATTTCATTTTGATAACTAACAGTATAT  200

seq1  AGCTCACTGGACCTATGCCCATCTATGCACACGCTCTGGTTAGCAGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTGGACCTATGCCCATCTATGCACACGCTCTGGTTAGCAGTTGA  250

seq1  GCTTCTGTGGACCTCTATAGGCACAGGTTAGTTGATTCTATATGCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTGGACCTCTATAGGCACAGGTTAGTTGATTCTATATGCTTTCT  300

seq1  TGAGGTATCCTTGACCTCCATGCCTCCTTTAATCCTTCGTCTCCCTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATCCTTGACCTCCATGCCTCCTTTAATCCTTCGTCTCCCTCAAC  350

seq1  CATTGAATTACCCTACCTCTGACTAATATTTATTTAACTGTGGGTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATTACCCTACCTCTGACTAATATTTATTTAACTGTGGGTCTCTG  400

seq1  CATCTGTTTTCATCAGTTCCTGGGTGAAGCCTCTCAGATGACAGTTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTTTCATCAGTTCCTGGGTGAAGCCTCTCAGATGACAGTTATGC  450

seq1  TAAGTACCTATCTGGAAGTACAACAGAATATCATTATATTATCAGGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACCTATCTGGAAGTACAACAGAATATCATTATATTATCAGGGATG  500

seq1  GCCTCTTTCCAAAGCTGAGCCAGTCTTTGGTTGGTGAGTCTCTCAATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTCCAAAGCTGAGCCAGTCTTTGGTTGGTGAGTCTCTCAATTTC  550

seq1  TGCTGCAACTTTACCACTGAACAACGTGTTGATAGGAGAAACCTAGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAACTTTACCACTGAACAACGTGTTGATAGGAGAAACCTAGGGTC  600

seq1  TAAGGTTTTGTGGCTGGGCTGGTATCCCAGTCCCTCCGTTGGATGTCATT  650
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTTGTGGCTGGGCTGGTATCCCAGTCCCTCCGTTGGATGTCATT  650

seq1  TCTGGTTACAGGACACGGTTGTATCAGTCTCCATATCCTACTTTGCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTACAGGACACGGTTGTATCAGTCTCCATATCCTACTTTGCTAGA  700

seq1  AACCTTA  707
      |||||||
seq2  AACCTTA  707