BAC Information

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BAC

Clone NameB6Ng01-084B01
Chromosome6 (Build37)
Map Location 128,756,966 - 128,758,079
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862
Downstream geneKlrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084B01.bB6Ng01-084B01.g
ACCDH898140DH898141
length1,102747
definitionDH898140|Mus musculus domesticus DNA, BAC clone: B6Ng01-084B01, 5' end.DH898141|Mus musculus domesticus DNA, BAC clone: B6Ng01-084B01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatcacagacatgaatggcagcctacattgcataatagtagaa
agaaggtgggttgtgggttaaagaggaactggagtattgtattattcctg
aaagggttagtagaatggaactcccctagtgcatgttttttactaggccc
agaggaatagcataatcaggtatttactaagggacccctggtggtgggtt
taacaatagactagcattgtacctgggtcctgtgaatatctgattttaga
tagggctgttcctatctcagttgtaaacactgcctggctccccctagcgt
tttatgtatgcattttctttgttttgtgtaaagggctgtgcagagaaact
ctgtctcgaaacaaacaacaacaaaaacccaaaatttaaaaaagaattaa
gtataagaacggattcagtgctgggtaatggcagtcacatgaaaatattc
acttcagcactgggacacatgattgcactgaggatgtgtttatgagaaga
agcaggttatttgtaactgctttaggaagactgacccatccagcaggtcc
agttattcgagggtctcgaggggaccttctcctaataaccaaatgggggg
ggggtatagagagacaagggccttgtgcacataacgacttggaactgttc
tgaattgcatcaaagccccaaatgtattagccaggcccaaggtttaaatt
cacaagcaaaagggggagagtgcctttcagcagaaggaatggggcagagg
aaatgcacctcagcaggagagatggggcagcagaaaaagaggaagtactt
ctcagcaggagggatggggcagtggaaatttttcttttggcgactacaag
gggaagcaagaacttggcggtatcaggtacatcttgaggtcaggacatcc
ggcgctgactttctcggagcagtgcgttcggtgaccgcttttgacccctt
ttctctcggggggagaggcccaattcagagatcaggacaattgtgttgtc
taatagctccaacgaagacattctctgatttgttttatgtaatagaataa
ctgtgactctgaggcatcataaagctagccagatgtctgtacggtggagc
cc
gaattctcacctgaagaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgagcatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgacggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaagaacacatgttccactat
gttcatagcagccttgtttataatagccagaatctggaaagaacccagat
gctgaaaggacccagatatagctctctcttgtgagactatgccggggcct
agcaaacacagaagtggatgatcacagtaagctattggatgggtcacacg
gcccccaatggaggagctagagaaattacccaaggagctaaagggaactg
caaccctataggtggaacaacaatatgaactaaccagtaaccgggagctc
ttgtctttagctgcatatgtatcaaaagatggcctagtcggccatcactg
caaagagaggcccattggacttgcaaactttatatgccccagtacagggg
aacgccagggccaaaaagggggagcgggtgggtaggggattgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128756966_128758079
seq2: B6Ng01-084B01.b_43_1143

seq1  GAATTCTCATCACAGACATGAATGGCAGCCTACATTGCATAATAGTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCACAGACATGAATGGCAGCCTACATTGCATAATAGTAGAA  50

seq1  AGAAGGTGGGTTGTGGGTTAAAGAGGAACTGGAGTATTGTATTATTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGGGTTGTGGGTTAAAGAGGAACTGGAGTATTGTATTATTCCTG  100

seq1  AAAGGGTTAGTAGAATGGAACTCCCCTAGTGCATGTTTTTTACTAGGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTAGTAGAATGGAACTCCCCTAGTGCATGTTTTTTACTAGGCCC  150

seq1  AGAGGAATAGCATAATCAGGTATTTACTAAGGGACCCCTGGTGGTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATAGCATAATCAGGTATTTACTAAGGGACCCCTGGTGGTGGGTT  200

seq1  TAACAATAGACTAGCATTGTACCTGGGTCCTGTGAATATCTGATTTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAGACTAGCATTGTACCTGGGTCCTGTGAATATCTGATTTTAGA  250

seq1  TAGGGCTGTTCCTATCTCAGTTGTAAACACTGCCTGGCTCCCCCTAGCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGTTCCTATCTCAGTTGTAAACACTGCCTGGCTCCCCCTAGCGT  300

seq1  TTTATGTATGCATTTTCTTTGTTTTGTGTAAAGGGCTGTGCAGAGAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATGCATTTTCTTTGTTTTGTGTAAAGGGCTGTGCAGAGAAACT  350

seq1  CTGTCTCGAAACAAACAACAACAAAAACCCAAAATTTAAAAAAGAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCGAAACAAACAACAACAAAAACCCAAAATTTAAAAAAGAATTAA  400

seq1  GTATAAGAACGGATTCAGTGCTGGGTAATGGCAGTCACATGAAAATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGAACGGATTCAGTGCTGGGTAATGGCAGTCACATGAAAATATTC  450

seq1  ACTTCAGCACTGGGACACATGATTGCACTGAGGATGTGTTTATGAGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCACTGGGACACATGATTGCACTGAGGATGTGTTTATGAGAAGA  500

seq1  AGCAGGTTATTTGTAACTGCTTTAGGAAGACTGACCCATCCAGCAGGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTTATTTGTAACTGCTTTAGGAAGACTGACCCATCCAGCAGGTCC  550

seq1  AGTTATTCGAGGGTCTCGAGGGGACCTTCTCCTAATAACCAAATGGGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTCGAGGGTCTCGAGGGGACCTTCTCCTAATAACCAAATGGGGGG  600

seq1  GGGGTATAGAGAGACAAGGGCCTTGTGCACATAACGACTTGGAACTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATAGAGAGACAAGGGCCTTGTGCACATAACGACTTGGAACTGTTC  650

seq1  TGAATTGCATCAAAGCCCCAAATGTATTAGCCAGGCCCAAGGTTTAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCATCAAAGCCCCAAATGTATTAGCCAGGCCCAAGGTTTAAATT  700

seq1  CACAAGCAAAAGGGGGAGAGTGCCTTTCAGCAGAAGGAATGGGGCAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCAAAAGGGGGAGAGTGCCTTTCAGCAGAAGGAATGGGGCAGAGG  750

seq1  AAATGCACCTCAGCAGGAGAGATGGGGCAGCAGAAAAAGAGGAAGTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACCTCAGCAGGAGAGATGGGGCAGCAGAAAAAGAGGAAGTACTT  800

seq1  CTCAGCAGGAGGGATGGGGCAGTGGAAATTTTTCTTTTGGCGACTACAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGGAGGGATGGGGCAGTGGAAATTTTTCTTTTGGCGACTACAAG  850

seq1  GGGAAGCAGGAACTTGGCGGTATCAGGGTACATCTTGAGGTCAGGACATC  900
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  GGGAAGCAAGAACTTGGCGGTATCA-GGTACATCTTGAGGTCAGGACATC  899

seq1  CGGCGCTGACTTTCTCGGAGCAGTGCGTCCGGTGGACCGCTTTTGACCCC  950
      |||||||||||||||||||||||||||| |||| |||||||||||| |||
seq2  CGGCGCTGACTTTCTCGGAGCAGTGCGTTCGGT-GACCGCTTTTGA-CCC  947

seq1  CTTTTCTTCTCGGGGGGAGAGGCCCAATTCAGAGATCAGGACAATTGTGT  1000
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTC-TCTCGGGGGGAGAGGCCCAATTCAGAGATCAGGACAATTGTGT  996

seq1  TGTCTTAATAGCTCCCAACAGAAGACATTCTCTGAATTTGTTTTTATGTA  1050
      |||| |||||||| ||||| |||||||||||||| ||||| |||||||| 
seq2  TGTC-TAATAGCT-CCAAC-GAAGACATTCTCTG-ATTTG-TTTTATGT-  1040

seq1  AATAGAAATAACTTGTGACTCTGAGGCATCATTAAAGCTAGCCCCAGATG  1100
      ||||| |||||| |||||||||||||||||| |||||||||  |||||||
seq2  AATAG-AATAAC-TGTGACTCTGAGGCATCA-TAAAGCTAG--CCAGATG  1085

seq1  -CTGAAC-GTGGAGCC  1114
       ||| || ||||||||
seq2  TCTGTACGGTGGAGCC  1101