BAC Information

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BAC

Clone NameB6Ng01-084P09
Chromosome6 (Build37)
Map Location 130,787,848 - 130,936,752
singlet/doubletdoublet
Overlap geneEG636947, LOC625628, EG625648
Upstream geneKlra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566
Downstream geneLOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084P09.bB6Ng01-084P09.g
ACCDH898766DH898767
length1,1621,001
definitionDH898766|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P09, 5' end.DH898767|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,935,575 - 130,936,752)(130,787,848 - 130,788,756)
sequence
gaattcatttttaaatcattaaacagtattctaaagtgaaaggattttaa
ccagaataatagtaataactatgctaatacaaacatgttgcataatgttt
atagtttagtatgggaggtaattagtatttatgagatatattctctttga
agactattgtgttcttagactttgaactttttaaatagtaattttaatct
ctaatccctcctttttacaattatcaataaatatattagaattgtctatt
actattgccttggtgggtttagtgttcattttatgctgggctgattcata
tcttccaattcctgattcataatgccaacagaaatatgttacaaaaaata
aatttgattgcttttgacaaattctaagacaatggttttgaagagagtat
gtgttgagcagggaaaatcatgaggtttcctgagtatgtaaagtgtgtgt
gttttatgaataaaatcacctgaattacaaggaacatagtttctgttcca
gggcaaaattctaagtgttcccagtgggtggggatgagattgaaccttta
agattacaaatcctcctctggtcaaaatgttgatggtcatagtgcattct
taatattgtccacaatagaattctcactcttatttttatttttttcaaat
cataggaggtcgcaaaatagggaaagggaaaggcccttttttatttattg
taaatgccaatatatttagtacttgaatctctgtttgccactttggtttt
caagcaaacagtataaggatacttagggcatttgcattacagtgtgtgtg
tgtgaatagagcaatgaatatcagggtatagcaagcatctatggagtaga
atagtgaggcctttgtacatataccaatgagaggtacacatctgtgccat
gtgttacttttctgagaattcttcacatagatttccatagatgatttgct
agttttcaatcttgcaaatctaaatttcccatttcccttcagcattttaa
ctgggtatttatttcatttacatttccatgctatcccaaagttcccacac
actccccaccattctctacccactcttctacccacacgcccactctggct
ttgcattccctgtactggaggcattaaagtttgacgaacataggtctctc
ttccatgatggc
gaattctctgataatagggtttcaacattatttaaattctgacaataatt
ttctctttccaaataacgtttccttatgaaagctgggacaataattttct
aagttatctccatgcatggatctatgggctcaaagcatagaagttgggtt
aaaatatttgccatgtcctatatattagtaatatttctctccaggatgca
tgctgggttgtctttgaaggcactatttccatgtcaaggattttccacac
tccttacattagtaaggttgtctctagtttgtattctgaggtgattttga
agatttgaggacagggaaaagtatttaccacagtcactaaacttacaagg
ttgttttccagtatgggttggttgatgaaattggaaagtggaggaccagg
taaaagattccaacacagaccatgtttgtaaggtttatcgcttttgtgga
ttatgtagtgaacataaagatttggagagttagtgaatgatatgccatct
tcatttcatttgtaaggtttctctccagtatggattctgtgatgagcttt
atgatctgagtgttgtgtaaaggatttgccacattcattatatttctaag
gcttctctcctgtatggattctatagtgaacttgaagtgtagaggattgt
ataaaagatttgtcacactcattacatttgtaaggttttttctcctgtat
ggatcctatagtgaactttgtaagtatgtgtaccttgtaaaatattttgc
cacatttcagaacatttgtaaggtttctctcctgtatggattgtgtagtg
atatatagactctgagtactgtacaaaagattttctcacattcattacat
ttataaggtttctctactgtatgaattctgtagtgaactttagcactttg
tttctgtgtaaaagatttgccacattcattacatttgtaacgcttctctc
ctgtatgggttctatagtgaactttaagttctgagtctgtgtaaagattt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130935575_130936752
seq2: B6Ng01-084P09.b_45_1206 (reverse)

seq1  GCCATCAGTGGAAAGAGAGACCTATTGGTCGTGCAAACTTTATATGCCT-  49
      ||||||| ||| |||||||||||| || |||| ||||||||| |||||| 
seq2  GCCATCA-TGG-AAGAGAGACCTA-TGTTCGT-CAAACTTTA-ATGCCTC  45

seq1  CAGTACAGGGGAATGCAAAGGCCAAGAAGTGGGCGTTGGTGGGTAGGAGA  99
      ||||||| ||||||||||| ||||   |||||||||  |||||||| |||
seq2  CAGTACA-GGGAATGCAAA-GCCA--GAGTGGGCGT--GTGGGTAGAAGA  89

seq1  GTGGGTAGGAGAATGGGTGGGGGAGTGTGTGGGGAACTTTTGGGATAGCA  149
      ||||||| ||||||||   ||||||||||| |||||| ||||||||||||
seq2  GTGGGTA-GAGAATGG--TGGGGAGTGTGT-GGGAAC-TTTGGGATAGCA  134

seq1  TTGGAAATGTAAATGAAATAAATACCCAGTTAAAAATGCTGAAGGGAAAT  199
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  -TGGAAATGTAAATGAAATAAATACCCAGTT-AAAATGCTGAAGGGAAAT  182

seq1  GGGAAATTTAGATTTGCAAGATTGAAAACTAGCAAATCATCTATGGAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTTAGATTTGCAAGATTGAAAACTAGCAAATCATCTATGGAAAT  232

seq1  CTATGTGAAGAATTCTCAG-AAAGTAACACATGGCACAGATGTGTACCTC  298
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTATGTGAAGAATTCTCAGAAAAGTAACACATGGCACAGATGTGTACCTC  282

seq1  TCATTGGTATATGTACAAAGGCCTCACTATTCTACTCCATAGATGCTTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTATATGTACAAAGGCCTCACTATTCTACTCCATAGATGCTTGC  332

seq1  TATACCCTGATATTCATTGCTCTATTCACACACACACACTGTAATGCAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCTGATATTCATTGCTCTATTCACACACACACACTGTAATGCAAA  382

seq1  TGCCCTAAGTATCCTTATACTGTTTGCTTGAAAACCAAAGTGGCAAACAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTAAGTATCCTTATACTGTTTGCTTGAAAACCAAAGTGGCAAACAG  432

seq1  AGATTCAAGTACTAAATATATTGGCATTTACAATAAATAAAAAAGGGCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAAGTACTAAATATATTGGCATTTACAATAAATAAAAAAGGGCCT  482

seq1  TTCCCTTTCCCTATTTTGCGACCTCCTATGATTTGAAAAAAATAAAAATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTCCCTATTTTGCGACCTCCTATGATTTGAAAAAAATAAAAATA  532

seq1  AGAGTGAGAATTCTATTGTGGACAATATTAAGAATGCACTATGACCATCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGAATTCTATTGTGGACAATATTAAGAATGCACTATGACCATCA  582

seq1  ACATTTTGACCAGAGGAGGATTTGTAATCTTAAAGGTTCAATCTCATCCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGACCAGAGGAGGATTTGTAATCTTAAAGGTTCAATCTCATCCC  632

seq1  CACCCACTGGGAACACTTAGAATTTTGCCCTGGAACAGAAACTATGTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTGGGAACACTTAGAATTTTGCCCTGGAACAGAAACTATGTTCC  682

seq1  TTGTAATTCAGGTGATTTTATTCATAAAACACACACACTTTACATACTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTCAGGTGATTTTATTCATAAAACACACACACTTTACATACTCA  732

seq1  GGAAACCTCATGATTTTCCCTGCTCAACACATACTCTCTTCAAAACCATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCTCATGATTTTCCCTGCTCAACACATACTCTCTTCAAAACCATT  782

seq1  GTCTTAGAATTTGTCAAAAGCAATCAAATTTATTTTTTGTAACATATTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAATTTGTCAAAAGCAATCAAATTTATTTTTTGTAACATATTTC  832

seq1  TGTTGGCATTATGAATCAGGAATTGGAAGATATGAATCAGCCCAGCATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCATTATGAATCAGGAATTGGAAGATATGAATCAGCCCAGCATAA  882

seq1  AATGAACACTAAACCCACCAAGGCAATAGTAATAGACAATTCTAATATAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACACTAAACCCACCAAGGCAATAGTAATAGACAATTCTAATATAT  932

seq1  TTATTGATAATTGTAAAAAGGAGGGATTAGAGATTAAAATTACTATTTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATAATTGTAAAAAGGAGGGATTAGAGATTAAAATTACTATTTAA  982

seq1  AAAGTTCAAAGTCTAAGAACACAATAGTCTTCAAAGAGAATATATCTCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCAAAGTCTAAGAACACAATAGTCTTCAAAGAGAATATATCTCAT  1032

seq1  AAATACTAATTACCTCCCATACTAAACTATAAACATTATGCAACATGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAATTACCTCCCATACTAAACTATAAACATTATGCAACATGTTT  1082

seq1  GTATTAGCATAGTTATTACTATTATTCTGGTTAAAATCCTTTCACTTTAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGCATAGTTATTACTATTATTCTGGTTAAAATCCTTTCACTTTAG  1132

seq1  AATACTGTTTAATGATTTAAAAATGAATTC  1178
      ||||||||||||||||||||||||||||||
seq2  AATACTGTTTAATGATTTAAAAATGAATTC  1162

seq1: chr6_130787848_130788756
seq2: B6Ng01-084P09.g_71_984

seq1  GAATTCTCTGATAATAGGGTTTCAACATTATTTAAATTCTGACAATAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATAATAGGGTTTCAACATTATTTAAATTCTGACAATAATT  50

seq1  TTCTCTTTCCAAATAACGTTTCCTTATGAAAGCTGGGACAATAATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTCCAAATAACGTTTCCTTATGAAAGCTGGGACAATAATTTTCT  100

seq1  AAGTTATCTCCATGCATGGATCTATGGGCTCAAAGCATAGAAGTTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATCTCCATGCATGGATCTATGGGCTCAAAGCATAGAAGTTGGGTT  150

seq1  AAAATATTTGCCATGTCCTATATATTAGTAATATTTCTCTCCAGGATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTGCCATGTCCTATATATTAGTAATATTTCTCTCCAGGATGCA  200

seq1  TGCTGGGTTGTCTTTGAAGGCACTATTTCCATGTCAAGGATTTTCCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTTGTCTTTGAAGGCACTATTTCCATGTCAAGGATTTTCCACAC  250

seq1  TCCTTACATTAGTAAGGTTGTCTCTAGTTTGTATTCTGAGGTGATTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACATTAGTAAGGTTGTCTCTAGTTTGTATTCTGAGGTGATTTTGA  300

seq1  AGATTTGAGGACAGGGAAAAGTATTTACCACAGTCACTAAACTTACAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGAGGACAGGGAAAAGTATTTACCACAGTCACTAAACTTACAAGG  350

seq1  TTGTTTTCCAGTATGGGTTGGTTGATGAAATTGGAAAGTGGAGGACCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCCAGTATGGGTTGGTTGATGAAATTGGAAAGTGGAGGACCAGG  400

seq1  TAAAAGATTCCAACACAGACCATGTTTGTAAGGTTTATCGCTTTTGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATTCCAACACAGACCATGTTTGTAAGGTTTATCGCTTTTGTGGA  450

seq1  TTATGTAGTGAACATAAAGATTTGGAGAGTTAGTGAATGATATGCCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGTGAACATAAAGATTTGGAGAGTTAGTGAATGATATGCCATCT  500

seq1  TCATTTCATTTGTAAGGTTTCTCTCCAGTATGGATTCTGTGATGAGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCATTTGTAAGGTTTCTCTCCAGTATGGATTCTGTGATGAGCTTT  550

seq1  ATGATCTGAGTGTTGTGTAAAGGATTTGCCACATTCATTATATTTCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTGAGTGTTGTGTAAAGGATTTGCCACATTCATTATATTTCTAAG  600

seq1  GCTTCTCTCCTGTATGGATTCTATAGTGAACTTGAAGTGTAGAGGATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTCCTGTATGGATTCTATAGTGAACTTGAAGTGTAGAGGATTGT  650

seq1  ATAAAAGATTTGTCACACTCATTACATTTGTAAGG-TTTTTCTCCTGTAT  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATAAAAGATTTGTCACACTCATTACATTTGTAAGGTTTTTTCTCCTGTAT  700

seq1  GGATCCTATAGTGAAC-TTGTAAGTATGTGTACCTTGTAAAATA-TTTGC  747
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  GGATCCTATAGTGAACTTTGTAAGTATGTGTACCTTGTAAAATATTTTGC  750

seq1  CACA-TTCAGAACATTTGTAAGGTTTCTCTCCTGTATGGATTGTGTAGTG  796
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCAGAACATTTGTAAGGTTTCTCTCCTGTATGGATTGTGTAGTG  800

seq1  ATATATAGACTCTGAGTACTGTACAAAAGA-TTTCCCACATTCATTACAT  845
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  ATATATAGACTCTGAGTACTGTACAAAAGATTTTCTCACATTCATTACAT  850

seq1  TTATAAGGTTTCTCTACTGTATGAATTCTGTAGTGAACTTTAAGCACTTT  895
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTATAAGGTTTCTCTACTGTATGAATTCTGTAGTGAACTTT-AGCACTTT  899

seq1  G-TTCTGTGTAAAAG  909
      | |||||||||||||
seq2  GTTTCTGTGTAAAAG  914