MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-087C24
Chromosome	6 (Build37)
Map Location	5,555,179 - 5,693,778
singlet/doublet	doublet
Overlap gene	Dync1i1
Upstream gene	Casd1, Sgce, Peg10, LOC100040018, Ppp1r9a, Pon1, Pon3, Pon2, Asb4, Pdk4
Downstream gene	Slc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826
Link	Open Mouse BAC browser

Click to get alignment info.

name	Casd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213819 MGI:2384865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20392 MGI:1329042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Peg10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170676 MGI:2157785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040018 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 10 Proteins

name	Ppp1r9a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243725 MGI:2442401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pon1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18979 MGI:103295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pon3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269823 MGI:106686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pon2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330260 MGI:106687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65255 MGI:1929751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27273 MGI:1351481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dync1i1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13426 MGI:107743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667468 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins pseudo : _no_value

name	LOC667471 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins pseudo : _no_value

name	LOC100040096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Shfm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20422 MGI:109238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 137 ESTs, 4 Proteins pseudo : _no_value

name	Casd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37620156 GeneID:213819 MGI:2384865
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAS1 domain containing 1 transcript_id : NM_145398.2

name	Sgce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981493 GeneID:20392 MGI:1329042
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcoglycan, epsilon transcript_id : NM_011360.2

name	Peg10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:98985811 GeneID:170676 MGI:2157785
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : paternally expressed 10 transcript_id : NM_001040611.1

name	LOC100040018 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254836 GeneID:100040018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 10 Proteins product : similar to Chain A, Crystal Structure Of Glia Maturation Factor-Gamma (Gmfg) From Mus Musculus At 1.50 A Resolution transcript_id : XM_001473951.1

name	Ppp1r9a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130685 GeneID:243725 MGI:2442401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 9A transcript_id : NM_181595.3

name	Pon1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352560 GeneID:18979 MGI:103295
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paraoxonase 1 transcript_id : NM_011134.2

name	Pon3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27370509 GeneID:269823 MGI:106686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paraoxonase 3 transcript_id : NM_173006.1

name	Pon2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130746 GeneID:330260 MGI:106687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paraoxonase 2 transcript_id : NM_183308.2

name	Asb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637818 GeneID:65255 MGI:1929751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 4 transcript_id : NM_023048.5

name	Pdk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130875 GeneID:27273 MGI:1351481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyruvate dehydrogenase kinase, isoenzyme 4 transcript_id : NM_013743.2

name	Dync1i1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802700 GeneID:13426 MGI:107743
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 1 intermediate chain 1 transcript_id : NM_010063.2

name	Slc25a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131091 GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 transcript_id : NM_015829.2

name	EG667462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254838 GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667462 transcript_id : XM_990672.2

name	LOC100040096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254841 GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040096 transcript_id : XM_001474083.1

name	Shfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677940 GeneID:20422 MGI:109238
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : split hand/foot malformation (ectrodactyly) type 1 transcript_id : NM_009169.1

name	Casd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37620157 CCDS:CCDS19896.1 GeneID:213819 MGI:2384865
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : O-acetyltransferase protein_id : NP_663373.2

name	Sgce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981494 GeneID:20392 MGI:1329042
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0016012 - sarcoglycan complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : epsilon-Sarcoglycan splicing variant 3A product : sarcoglycan, epsilon protein_id : NP_035490.2

name	Peg10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:98985812 GeneID:170676 MGI:2157785
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform RF1 is encoded by transcript variant 1; MyEF-3 like; embryonal carcinoma differentiation regulated product : paternally expressed 10 isoform RF1 protein_id : NP_001035701.1

name	LOC100040018 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254837 GeneID:100040018
definition	codon_start : 1 product : similar to Chain A, Crystal Structure Of Glia Maturation Factor-Gamma (Gmfg) From Mus Musculus At 1.50 A Resolution protein_id : XP_001474001.1

name	Ppp1r9a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31711997 CCDS:CCDS19897.1 GeneID:243725 MGI:2442401
definition	GO_component : GO:0030864 - cortical actin cytoskeleton [Evidence IDA]; GO:0043197 - dendritic spine [Evidence IDA]; GO:0030175 - filopodium [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IPI] codon_start : 1 note : neurabin; neural tissue-specific F-actin binding protein; Neurabin I product : protein phosphatase 1, regulatory (inhibitor) subunit 9A protein_id : NP_853626.1

name	Pon1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242183 CCDS:CCDS19898.1 GeneID:18979 MGI:103295
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004063 - aryldialkylphosphatase activity [Evidence IEA]; GO:0004064 - arylesterase activity [Evidence IMP]; GO:0008035 - high-density lipoprotein binding [Evidence TAS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence TAS] [Evidence IMP]; GO:0008015 - circulation [Evidence TAS]; GO:0009636 - response to toxin [Evidence IMP] codon_start : 1 exception : mismatches in translation product : paraoxonase 1 protein_id : NP_035264.1

name	Pon3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370510 CCDS:CCDS19899.1 GeneID:269823 MGI:106686
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004064 - arylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : paraoxonase 3 protein_id : NP_766594.1

name	Pon2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34303979 CCDS:CCDS19900.1 GeneID:330260 MGI:106687
definition	EC_number : 3.1.1.2 EC_number : 3.1.8.1 GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004063 - aryldialkylphosphatase activity [Evidence IEA]; GO:0004064 - arylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : paraoxonase 2 protein_id : NP_899131.1

name	Asb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17505202 CCDS:CCDS19901.1 GeneID:65255 MGI:1929751
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 4 protein_id : NP_075535.1

name	Pdk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305375 CCDS:CCDS19902.1 GeneID:27273 MGI:1351481
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004712 - protein threonine/tyrosine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA] GO_process : GO:0006086 - acetyl-CoA biosynthesis from pyruvate [Evidence TAS]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : pyruvate dehydrogenase kinase 4 protein_id : NP_038771.1

name	Dync1i1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753656 CCDS:CCDS19903.1 GeneID:13426 MGI:107743
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence TAS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dynein, cytoplasmic, intermediate chain 1 protein_id : NP_034193.1

name	Slc25a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657583 GeneID:50799 MGI:1354721
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] [Evidence TAS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005313 - L-glutamate transporter activity [Evidence IMP] GO_process : GO:0015810 - aspartate transport [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : citrin product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein_id : NP_056644.1

name	EG667462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254839 GeneID:667462 MGI:3644294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_995766.2

name	LOC100040096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254842 GeneID:100040096
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474133.1

name	Shfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677941 GeneID:20422 MGI:109238
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0000502 - proteasome complex (sensu Eukaryota) [Evidence ISS]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0008233 - peptidase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0000724 - double-strand break repair via homologous recombination [Evidence IMP]; GO:0006508 - proteolysis [Evidence ISS] codon_start : 1 product : split hand/foot deleted gene 1 protein_id : NP_033195.1

name	(CDS detail)
type	STS
link
xref	UniSTS:159479
definition	standard_name : AF031919

name	(CDS detail)
type	STS
link
xref	UniSTS:144397
definition	standard_name : Sgce

name	(CDS detail)
type	STS
link
xref	UniSTS:489595
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:479194
definition	standard_name : Peg10

name	(CDS detail)
type	STS
link
xref	UniSTS:273401
definition	standard_name : PMC60235P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271847
definition	standard_name : PMC197179P1

name	(CDS detail)
type	STS
link
xref	UniSTS:162504
definition	standard_name : RH125750

name	(CDS detail)
type	STS
link
xref	UniSTS:159480
definition	standard_name : AI324845

name	(CDS detail)
type	STS
link
xref	UniSTS:235381
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:273730
definition	standard_name : Ppp1r9a

name	(CDS detail)
type	STS
link
xref	UniSTS:185652
definition	standard_name : BB181831

name	(CDS detail)
type	STS
link
xref	UniSTS:144238
definition	standard_name : Pon1

name	(CDS detail)
type	STS
link
xref	UniSTS:125724
definition	standard_name : U32684

name	(CDS detail)
type	STS
link
xref	UniSTS:144236
definition	standard_name : Pon1

name	(CDS detail)
type	STS
link
xref	UniSTS:271848
definition	standard_name : PMC197179P2

name	(CDS detail)
type	STS
link
xref	UniSTS:165448
definition	standard_name : AI786302

name	(CDS detail)
type	STS
link
xref	UniSTS:271849
definition	standard_name : PMC197179P3

name	(CDS detail)
type	STS
link
xref	UniSTS:179333
definition	standard_name : AI481612

name	(CDS detail)
type	STS
link
xref	UniSTS:144239
definition	standard_name : Pon2

name	(CDS detail)
type	STS
link
xref	UniSTS:116577
definition	standard_name : D6Mit166

name	(CDS detail)
type	STS
link
xref	UniSTS:125339
definition	standard_name : MHAa7b6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:265592
definition	standard_name : Asb4

name	(CDS detail)
type	STS
link
xref	UniSTS:165449
definition	standard_name : AV117194

name	(CDS detail)
type	STS
link
xref	UniSTS:179334
definition	standard_name : AW060255

name	(CDS detail)
type	STS
link
xref	UniSTS:179332
definition	standard_name : AV005916

name	(CDS detail)
type	STS
link
xref	UniSTS:163381
definition	standard_name : AJ001418

name	(CDS detail)
type	STS
link
xref	UniSTS:116579
definition	standard_name : D6Mit179

name	(CDS detail)
type	STS
link
xref	UniSTS:130846
definition	standard_name : D6Mit296

name	(CDS detail)
type	STS
link
xref	UniSTS:116578
definition	standard_name : RH90722

name	(CDS detail)
type	STS
link
xref	UniSTS:124217
definition	standard_name : 37.MMHAP14FLE4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:5464
definition	standard_name : RH46992

name	(CDS detail)
type	STS
link
xref	UniSTS:164309
definition	standard_name : AI785475

name	(CDS detail)
type	STS
link
xref	UniSTS:179331
definition	standard_name : AW108044

name	(CDS detail)
type	STS
link
xref	UniSTS:167488
definition	standard_name : RH127277

name	EG667468 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254858 GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins product : predicted gene, EG667468 pseudo : _no_value transcript_id : XR_032062.1

name	LOC667471 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254840 GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins product : similar to heterogeneous nuclear ribonucleoprotein A1 pseudo : _no_value transcript_id : XR_031544.1

name	LOC545826 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254859 GeneID:545826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 137 ESTs, 4 Proteins product : similar to farnesyl pyrophosphate synthase pseudo : _no_value transcript_id : XR_032085.1

clone name	MSMg01-453G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344J10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409J01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-456L14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-392K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-087C24.b	B6Ng01-087C24.g
ACC	DH900387	DH900388
length	1,180	1,167
definition	DH900387\|Mus musculus domesticus DNA, BAC clone: B6Ng01-087C24, 5' end.	DH900388\|Mus musculus domesticus DNA, BAC clone: B6Ng01-087C24, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,555,179 - 5,556,360)	(5,692,604 - 5,693,778)
sequence	gaattctgttaggatttttcaaacactcttagtgttacttgtctctcctc cttccttctgtattgctctcccttcccctttccaatcaaaggccccttca catttttctcattttcatattgcccccacatacaacactagcaccatggt ctcttcatacatgtttggtttctgatccaagaagtatagtcacatacgga gatgtaaaattagaaagctcaaatgagaaagaacatgccatgtctatcct tctggttctgggttttctcactaatataataaaatcttctgggtccatcc atttacctgcaaatttcatttttctttacagctgaattatatgtcatagt atacttatacttagttagggttttactgctgtgaacagacaccataacca aggcaactcttatgaggatagagtttaattgggactagcttacaggttca gtggttaagtccattattatcaaggcaggaacatgacagcacccaggtag gcatagtgcagaaggagttctacatcttcatctgaaggctgctaacagaa tactggcttccaggtagctaggttaagggtcttaaagcccacaccaattg agacacacctactccaacaaggccacacccactccaacaggaccacgcct tttaatagtgctattccctggaccgagcatatacaaaccatagcatatgt catagtgtatatgcaccacatttttagtattcattcattatttgagggac atttagattgtttccatttcctggctattgtgaatcaagcataagtgagg gtagctgaacaagtatctgtagagtaggacatatgccaaggagtggtgta gctgggttttacagaagagttattttcagctttccgaggattctgcacac tactttccagagtggctgcactcatttgtatggtcaccaagagaaaatag tgaattgtgttgaaactacagatagaccctgctagtatagcaaacctgac tggtgatgagtatctatagtagataagtgcttcttctgtgtgtttgatca gcatcttatactttgtagccaccgtctttatgtattttgttacatttttg ggggtacctcccctcagaatgaacatcttctgtcatcaattgtctcacaa agttcatggatgtccctcattttaacagcc	gaattcataattaactgtctctattgtttaatcacaagtaataaattcag cagtctaggatttatttccccaaatgctttagactaaatcatcaagctga aggctgctctttccttttaaaactttaaaaataatctgtgcttcagcaca gtgttctttgttgtacttagagatgctttctctgagttgctaagataata aatgaatgtttctaaaactaagtggctttcaagtaaccaggagaatccgt tcttaatgtaacttaataagcaaatctttatatctgactagctttcgctg tgactgtcaccagcctgatgttcttatacacaggccatgtttttctgtga agtgaattagattctgacagcatcagctggtagacctgtctatcttggtc ctctctcctggtatagaatgttggcaagtctatgaaatggcagggatcac caaaccctacacaacataagatagagaaacagaggtgcaacaagaccatg ttgagaatttgtccaaagcaagccactttgacattaaggtacactcttcc cagagcagactcttacggactatgtatgcctacatgttctctgtcccaca acctgctctcgaggtcttagcatttaattgagttgttctccttcctttat tttgtttcttggttgcagtcacttgctttatgtcagcagttgtcctccca gactttgctctatgggtggaaggaaactacaacacagagctagcaagaac tgagcaaatcaatgacttacttgtccctagagagaatgagccagagcttc acagagtaggtgaatcaaacacattacaaaagaaataagacacaagagcg cctaggtgagtggtgcttcccaagtagaggaggatgtatggacaaagggg ttggggcggggttaggaaggtgatacatctgaaggatgagtaattgatat ggatgcaatattaagtacaaaaatggtgggagatatgaaaacaggaatga aatccaagttagacccctgagattggagtagccactactcagttgcacga aatgcaaggaaacctgaaaggtgggggagatcttcatactaacctgaggg tagtgcaccctacaagcgaggaatatgctgtgctaaggctcagagaatct ggacatttctctgcagg
quality values	Open. Hide. 61 47 23 36 61 47 38 26 47 61 61 61 61 49 27 61 61 61 61 49 37 61 61 59 38 45 13 21 13 12 13 13 19 26 32 30 36 59 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 44 55 43 44 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 52 52 61 61 61 61 61 61 61 61 57 57 57 57 57 57 53 57 42 45 57 57 53 57 57 57 57 57 57 53 47 57 53 53 47 53 53 57 57 57 57 53 57 53 50 53 57 57 57 53 57 57 57 57 40 32 57 53 40 53 45 57 45 53 50 53 53 53 47 47 53 57 57 47 47 42 57 53 53 52 57 40 33 57 40 53 53 53 57 52 53 52 36 53 52 50 47 52 47 57 52 53 53 52 46 57 57 57 53 53 53 52 43 46 47 53 50 57 53 53 50 50 53 53 38 57 52 57 52 53 53 52 50 53 41 52 53 52 57 50 52 52 44 53 53 53 53 39 50 50 53 52 50 53 36 47 37 34 50 50 53 57 57 57 36 42 41 43 41 29 52 42 35 53 57 38 31 53 53 47 57 57 53 52 53 24 57 37 31 24 40 37 57 53 48 37 48 34 37 52 21 57 29 33 41 28 47 57 53 41 41 40 53 45 41 40 41 44 29 53 40 47 47 44 36 43 40 39 41 41 37 40 33 46 30 30 34 48 19 46 46 30 40 29 32 38 31 43 36 31 26 33 32 40 39 38 39 34 44 29 30 30 47 32 24 34 31 36 36 25 33 39 33 33 38 29 46 28 19 12 46 36 24 24 37 24 26 48 31 29 21 29 29 29 51 41 43 51 51 10 11 30 25 16 39 34 12 36 15 29 12 24 29 51 41 29 26 14 27 34 43 46 32 23 31 16 43 18 30 9 5 39 29 28 35 33 29 29 21 29 34 31 28 29 51 29 38 12 11 20 43 20 24 23 33 21 28 29 25 22 31 31 31 29 39 51 34 22 19 36 34 31 28 17 29 26 28 31 20 39 25 36 14 29 51 51 33 18 20 21 30 35 27 29 12 32 22 23 40 17 31 26 26 51 27 19 24 29 34 20 15 32 26 30 22 36 34 51 33 33 38 34 30 31 25 23 12 10 23 19 28 26 39 29 12 28 27 29 30 28 22 38 33 16 27 22 10 28 30 15 18 29 21 30 31 32 19 22 29 16 27 19 32 7 25 32 8 17 25 18 20 15 33 13 31 30 10 9 5 11 12 12 6 33 20 27 26 26 30 20 26 29 29 29 10 13 5 10 10 17 16 12 31 14 19 6 21 12 17 9 11 4 19 4 5 7 10 37 10 5 4 5 14 10 5 35 31 13 17 5 13 13 12 8 4 25 31 24 11 9 36 36 36 23 11 11 26 14 8 5 6 3 3 9 20 14 9 19 23 9 22 10 9 14 6 10 6 7 16 9 4 4 3 3 2 3 4 2 4 17 12 10 6 6 5 3 5 7 4 13 14 5 14 6 13 9 3 8 3 17 5 10 13 17 21 14 6 7 7 20 13 5 5 13 6 8 4 3 7 11	Open. Hide. 55 61 52 49 61 11 14 16 13 12 18 30 22 26 22 26 37 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 55 61 61 61 59 59 23 43 29 18 28 31 35 30 23 55 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 45 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 57 53 57 57 57 57 57 57 57 53 52 50 57 50 47 53 45 57 53 57 57 57 57 53 57 53 47 53 47 53 57 53 57 53 57 57 47 53 57 57 53 53 38 57 57 57 57 57 57 57 57 57 57 57 57 57 53 53 41 52 57 57 57 57 57 57 53 53 57 52 53 47 57 45 57 53 53 53 53 47 53 57 57 35 47 53 39 46 43 53 53 53 53 57 43 57 57 52 53 53 53 52 53 57 50 57 43 52 52 57 57 53 53 52 57 57 53 57 52 57 53 37 53 57 37 52 53 53 53 42 53 57 57 57 53 57 57 42 43 42 57 53 52 38 32 53 52 50 53 52 53 44 53 53 48 39 57 53 35 39 41 40 53 57 53 52 53 52 52 42 40 44 40 57 37 42 53 53 41 44 25 57 35 57 37 44 41 40 44 20 26 41 37 47 40 27 53 28 53 53 40 44 53 41 35 36 30 30 36 48 46 34 21 48 34 51 38 44 31 47 30 41 48 38 30 47 47 32 31 47 30 41 38 37 45 36 30 27 30 48 39 48 28 47 26 26 48 36 25 32 29 29 17 47 19 30 37 39 39 27 30 30 29 48 25 28 35 13 30 28 33 31 24 29 35 28 51 30 31 28 43 18 25 29 28 29 29 51 51 40 24 43 51 29 32 33 30 32 36 24 30 43 27 43 38 43 23 46 26 30 38 27 29 14 46 25 29 43 21 29 29 36 21 29 31 27 31 29 46 40 29 35 29 29 33 28 43 23 34 43 14 15 10 10 29 28 25 23 30 29 28 28 26 44 16 17 44 36 30 22 31 25 44 36 36 29 32 51 51 29 16 26 29 29 28 31 11 10 10 19 29 29 20 34 38 23 34 30 28 27 22 14 21 14 36 25 28 32 19 29 23 18 25 26 6 24 31 28 35 28 28 21 26 31 29 21 21 33 26 19 29 17 29 23 12 17 25 44 19 35 35 16 27 34 25 22 26 33 22 24 23 33 9 15 26 11 22 35 35 19 15 8 16 12 20 17 26 29 26 34 20 17 11 23 7 5 4 3 9 14 8 29 23 42 42 24 6 14 26 9 21 11 20 15 6 7 10 29 8 8 34 5 8 14 29 26 21 7 12 8 11 26 27 15 10 6 7 19 7 30 14 15 24 15 7 5 13 17 10 30 11 8 14 7 10 23 30 12 5 9 9 22 32 32 35 10 6 3 10 14 20 12 24 8 19 11 17 25 13 7 4 3 6 16 10 6 6 21 20 4 27 9 6 6 2 1 2 4 4 11 6 7 5 5 3 7 2 4 1 4 20 5 4 4 10 15 21 10 12 5 7 10 3 4 3 4 5 12 10 16 5 3 17 4 8 19 9 9 20 4 5 7 8 5 1 19 4 6 8 12 6 5 10 10 13 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_5555179_5556360
seq2: B6Ng01-087C24.b_37_1216

seq1  GAATTCTGTTAGGATTTTTCAAACACTCTTAGTGTTACTTGTCTCTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTAGGATTTTTCAAACACTCTTAGTGTTACTTGTCTCTCCTC  50

seq1  CTTCCTTCTGTATTGCTCTCCCTTCCCCTTTCCAATCAAAGGCCCCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTGTATTGCTCTCCCTTCCCCTTTCCAATCAAAGGCCCCTTCA  100

seq1  CATTTTTCTCATTTTCATATTGCCCCCACATACAACACTAGCACCATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTCATTTTCATATTGCCCCCACATACAACACTAGCACCATGGT  150

seq1  CTCTTCATACATGTTTGGTTTCTGATCCAAGAAGTATAGTCACATACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATACATGTTTGGTTTCTGATCCAAGAAGTATAGTCACATACGGA  200

seq1  GATGTAAAATTAGAAAGCTCAAATGAGAAAGAACATGCCATGTCTATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAAATTAGAAAGCTCAAATGAGAAAGAACATGCCATGTCTATCCT  250

seq1  TCTGGTTCTGGGTTTTCTCACTAATATAATAAAATCTTCTGGGTCCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCTGGGTTTTCTCACTAATATAATAAAATCTTCTGGGTCCATCC  300

seq1  ATTTACCTGCAAATTTCATTTTTCTTTACAGCTGAATTATATGTCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTGCAAATTTCATTTTTCTTTACAGCTGAATTATATGTCATAGT  350

seq1  ATACTTATACTTAGTTAGGGTTTTACTGCTGTGAACAGACACCATAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTATACTTAGTTAGGGTTTTACTGCTGTGAACAGACACCATAACCA  400

seq1  AGGCAACTCTTATGAGGATAGAGTTTAATTGGGACTAGCTTACAGGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTCTTATGAGGATAGAGTTTAATTGGGACTAGCTTACAGGTTCA  450

seq1  GTGGTTAAGTCCATTATTATCAAGGCAGGAACATGACAGCACCCAGGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAAGTCCATTATTATCAAGGCAGGAACATGACAGCACCCAGGTAG  500

seq1  GCATAGTGCAGAAGGAGTTCTACATCTTCATCTGAAGGCTGCTAACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTGCAGAAGGAGTTCTACATCTTCATCTGAAGGCTGCTAACAGAA  550

seq1  TACTGGCTTCCAGGTAGCTAGGTTAAGGGTCTTAAAGCCCACACCAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTTCCAGGTAGCTAGGTTAAGGGTCTTAAAGCCCACACCAATTG  600

seq1  AGACACACCTACTCCAACAAGGCCACACCCACTCCAACAGGACCACGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACCTACTCCAACAAGGCCACACCCACTCCAACAGGACCACGCCT  650

seq1  TTTAATAGTGCTATTCCCTGGACCGAGCATATACAAACCATAGCATATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAGTGCTATTCCCTGGACCGAGCATATACAAACCATAGCATATGT  700

seq1  CATAGTGTATATGCACCACATTTTTAGTATTCATTCATTATTTGAGGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTATATGCACCACATTTTTAGTATTCATTCATTATTTGAGGGAC  750

seq1  ATTTAGATTGTTTCCATTTCCTGGCTATTGTGAATCAAGCATAAGTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATTGTTTCCATTTCCTGGCTATTGTGAATCAAGCATAAGTGAGG  800

seq1  GTAGCTGAACAAGTATCTGTAGAGTAGGACATATGCCAAGGAGTGGTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGAACAAGTATCTGTAGAGTAGGACATATGCCAAGGAGTGGTGTA  850

seq1  GCTGGGTTTTACAGAAGAGTTATTTTCAGCTTTCCGAGGATTCTGCACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTTTACAGAAGAGTTATTTTCAGCTTTCCGAGGATTCTGCACAC  900

seq1  TACTTTCCAGAGTGGCTGCACTCATTTGTATGGTCACCAAGAGAAAATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCAGAGTGGCTGCACTCATTTGTATGGTCACCAAGAGAAAATAG  950

seq1  TGAATTGTGTTGAAACTACAGATAGACCCTGCTAGTATAGCAAACCTGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTGTTGAAACTACAGATAGACCCTGCTAGTATAGCAAACCTGAC  1000

seq1  TGGTGATGAGTATCTATAGTAGATAAGTGCTTCTTCTGTGTGTTTGATCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATGAGTATCTATAGTAGATAAGTGCTTCTTCTGTGTGTTTGATCA  1050

seq1  GCATCTTATACTTTGTAGCCAACCGTTCTTTATGTATTTTGTTACATTTT  1100
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  GCATCTTATACTTTGTAGCC-ACCG-TCTTTATGTATTTTGTTACATTTT  1098

seq1  TGGGGGTACCT-CACTCAGAATG-ACATCTTCTGGTTCTATCCATTTGTC  1148
      ||||||||||| | ||||||||| ||||||||||  || || || |||||
seq2  TGGGGGTACCTCCCCTCAGAATGAACATCTTCTG--TC-AT-CAATTGTC  1144

seq1  T-ACAAAGTTCAT-GATGT-CCTCATTTTTAACAGCC  1182
      | ||||||||||| ||||| ||||| |||||||||||
seq2  TCACAAAGTTCATGGATGTCCCTCA-TTTTAACAGCC  1180

seq1: chr6_5692604_5693778
seq2: B6Ng01-087C24.g_65_1231 (reverse)

seq1  CCTGCAGAG-AATGT-CAGATCTTCTTGGAG-CATAGCACAGCATATCTT  47
      ||||||||| ||||| ||||  ||||  ||| | |||||||||||||   
seq2  CCTGCAGAGAAATGTCCAGA--TTCTCTGAGCCTTAGCACAGCATATTCC  48

seq1  TCGC-TGTAGGGTGACCACTTACCTCAGTGTAGTATTGAAAGATCTCCCC  96
      |||| |||||||||  ||||  ||||||  ||||||   |||||||||||
seq2  TCGCTTGTAGGGTG--CACTACCCTCAGGTTAGTAT--GAAGATCTCCCC  94

seq1  CA-CTTTCAGGTTTCCTTGCATTTCCGTGCAAACTGGAGTAGTGGCTAAC  145
      || ||||||||||||||||||||| ||||| |||| ||||||||||||  
seq2  CACCTTTCAGGTTTCCTTGCATTT-CGTGC-AACT-GAGTAGTGGCTACT  141

seq1  TCAATCTCAGGGGTCTAACCTTGGATTTCATTCCTGTTTTCATATCTCCC  195
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCAATCTCAGGGGTCTAA-CTTGGATTTCATTCCTGTTTTCATATCTCCC  190

seq1  ACCATTTTTTGTACTTAATATTGCATCCATATCAAATTACTCATCCTTCA  245
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCA-TTTTTGTACTTAATATTGCATCCATATC-AATTACTCATCCTTCA  238

seq1  GATGTATCACCCTTCCTAACCCCGCCCCAACCCCTTTGTCCATACATCCT  295
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATCA-CCTTCCTAACCCCGCCCCAACCCCTTTGTCCATACATCCT  287

seq1  CCTCTACTTGGGAAGCACCACTCACCTAGGCGCTCTTGTGTCTTATTTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTTGGGAAGCACCACTCACCTAGGCGCTCTTGTGTCTTATTTCT  337

seq1  TTTGTAATGTGTTTGATTCACCTACTCTGTGAAGCTCTGGCTCATTCTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATGTGTTTGATTCACCTACTCTGTGAAGCTCTGGCTCATTCTCT  387

seq1  CTAGGGACAAGTAAGTCATTGATTTGCTCAGTTCTTGCTAGCTCTGTGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGACAAGTAAGTCATTGATTTGCTCAGTTCTTGCTAGCTCTGTGTT  437

seq1  GTAGTTTCCTTCCACCCATAGAGCAAAGTCTGGGAGGACAACTGCTGACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTCCTTCCACCCATAGAGCAAAGTCTGGGAGGACAACTGCTGACA  487

seq1  TAAAGCAAGTGACTGCAACCAAGAAACAAAATAAAGGAAGGAGAACAACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAGTGACTGCAACCAAGAAACAAAATAAAGGAAGGAGAACAACT  537

seq1  CAATTAAATGCTAAGACCTCGAGAGCAGGTTGTGGGACAGAGAACATGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAATGCTAAGACCTCGAGAGCAGGTTGTGGGACAGAGAACATGTA  587

seq1  GGCATACATAGTCCGTAAGAGTCTGCTCTGGGAAGAGTGTACCTTAATGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACATAGTCCGTAAGAGTCTGCTCTGGGAAGAGTGTACCTTAATGT  637

seq1  CAAAGTGGCTTGCTTTGGACAAATTCTCAACATGGTCTTGTTGCACCTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGGCTTGCTTTGGACAAATTCTCAACATGGTCTTGTTGCACCTCT  687

seq1  GTTTCTCTATCTTATGTTGTGTAGGGTTTGGTGATCCCTGCCATTTCATA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTATCTTATGTTGTGTAGGGTTTGGTGATCCCTGCCATTTCATA  737

seq1  GACTTGCCAACATTCTATACCAGGAGAGAGGACCAAGATAGACAGGTCTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCCAACATTCTATACCAGGAGAGAGGACCAAGATAGACAGGTCTA  787

seq1  CCAGCTGATGCTGTCAGAATCTAATTCACTTCACAGAAAAACATGGCCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGATGCTGTCAGAATCTAATTCACTTCACAGAAAAACATGGCCTG  837

seq1  TGTATAAGAACATCAGGCTGGTGACAGTCACAGCGAAAGCTAGTCAGATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAGAACATCAGGCTGGTGACAGTCACAGCGAAAGCTAGTCAGATA  887

seq1  TAAAGATTTGCTTATTAAGTTACATTAAGAACGGATTCTCCTGGTTACTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTTGCTTATTAAGTTACATTAAGAACGGATTCTCCTGGTTACTT  937

seq1  GAAAGCCACTTAGTTTTAGAAACATTCATTTATTATCTTAGCAACTCAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCACTTAGTTTTAGAAACATTCATTTATTATCTTAGCAACTCAGA  987

seq1  GAAAGCATCTCTAAGTACAACAAAGAACACTGTGCTGAAGCACAGATTAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATCTCTAAGTACAACAAAGAACACTGTGCTGAAGCACAGATTAT  1037

seq1  TTTTAAAGTTTTAAAAGGAAAGAGCAGCCTTCAGCTTGATGATTTAGTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTTTTAAAAGGAAAGAGCAGCCTTCAGCTTGATGATTTAGTCT  1087

seq1  AAAGCATTTGGGGAAATAAATCCTAGACTGCTGAATTTATTACTTGTGAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTTGGGGAAATAAATCCTAGACTGCTGAATTTATTACTTGTGAT  1137

seq1  TAAACAATAGAGACAGTTAATTATGAATTC  1175
      ||||||||||||||||||||||||||||||
seq2  TAAACAATAGAGACAGTTAATTATGAATTC  1167

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information