BAC Information

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BAC

Clone NameB6Ng01-088L06
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088L06.bB6Ng01-088L06.g
ACCDH901486DH901487
length1,0371,288
definitionDH901486|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L06, 5' end.DH901487|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcgagatttggaagtttttatcata
cagatctttcacctccttagtagagtcacgccagatattttatattattg
tgactattgagaaggtgttgttccctaatttcttctcagcctgttattct
ttgtatagagaaggccattgacttgtttgagttattt

gaattcactcactttgcataacacaaaaaataatttcccactctctcctc
cctccagcttctggcatccttgactccattccactctgtgattttatgac
tttgactattttagaaacctcacataaagggatcatctatagtatttgtc
attctgtgactggtttatttcagataatataatgtgctctgggttaatcc
aggtgatggcaaatggctatacatcttctcttttgaagactgaataagat
gaagttgcatttatatctcatatgttctttattctatatataattttact
actcaacctatgcctctctgaattatatgccatgttctgcagattcaaga
agcccctaggaaggagcaggaagatccaaatatatgaagaacaattcatg
tttatcacagcatatattagttaatttaattgttgctgggacaagatgcc
tgacaaaaagcaatttgaaggaggaagatcttacactggttcaaagtgta
aggagattatttcataattgggtgtaaggagctatgggagttaagtggaa
aaggcaaggtggcaagatcagaatgccagctgatattataacatttacag
tcagaaagcagagaatgaaccaaacagcatcccaaacagcactgccagca
gggtaccaagtacccaaacacatgaatccttgggggaatatttcacactc
gaaccacatgttgcccctctctcttacaggcttctagccatcattcagtg
aaaactgaatttcagtgaatcttcagacatttttatgaacactgttttga
acaatgccaacactgtttaaagcccaaagtctaagtctcttctgaaactc
agggtaacctcttgactgtgactggcagtaattttttaagttatatactt
cccatacagaatcacactgaataactctatagaccaaaagaaatcaatag
gggtatatctaggaaagatcagatttagcaaaactgacagtgcatggggt
agaagtagaatttggcaagactacagttctttgtccagtatctagattat
gacagaagattatatggtctctaaaacactgttgccctactccttcagct
ttgagttggaagaaatatgtaggtctcttaccagaaccaagcatatatga
ctttcatctttctcacagatgaaacagggccctgtgaatccttaaatttc
aatgaccattacagttggactctctcaggtcctatacatgtcctcaagaa
gcactctttgcaccaggcccaccaccccctacattaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-088L06.b_52_579 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528


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