BAC Information

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BAC

Clone NameB6Ng01-088L15
Chromosome6 (Build37)
Map Location 12,516,047 - 12,517,195
singlet/doubletsinglet
Overlap geneThsd7a
Upstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879
Downstream geneLOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088L15.bB6Ng01-088L15.g
ACCDH901502DH901503
length1,128243
definitionDH901502|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L15, 5' end.DH901503|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagatgctcacgttctcttgagtgaaaaaaaatttttttctag
tgtcaaacctattgtacctgctcttgaaattgctagtccttggtcataat
cgctaaagatgttgacagagaagctctatacacaccagtttcaaacaggc
tcaaagttggtattcaggttgtagcaattaaagcttcaggacttgtggac
aataggaagaaccagcttacagatatgctattgccactggtggtgcggtg
tttggaaaagaggagttgaaattaaatcttgaagatgttcaagctcatga
cttatgaaaagttggaaagatgattgtcaccaaagatgatgccatgctat
tgagagcaaaatgtgtcgaagctcaaattgaaagatatattccctgagta
gctagacatcacagctggtgaatatgaaaagaaacggctgaatgagcggc
tcgctaaactctcaggagtacctgcgctcaagcatggagggacaagtggt
gtggaattgagtgagaagaacgacagttacagatgctctcagggctacaa
gagcagcagtagacgaaggcattgttctaggaggggttgtgtctgcttct
gtgcaccctacccttggattcattaaagcctgataatgaagatcagaaaa
taggtatagaaattattaaaaggatactcaaaatccctgcaatgacaatt
gctaagaatgcaggtgttgaaggacctttcatagttgagaaaattctgca
gagttcctcagaagttggttatgacgccatgcttggagattttgtgaacg
tggtggaaaatggaatcattgattcaactaaagttgtaagaattgcctta
ctgagctgggcagtggtggtgcacacctttaatcccagcacttgggaggc
agaggcaggaggatttctgagttcgaggctagcctggtctacaaagtgag
ctccaggacagccaggctacacagaaaaccttgtctcaaaaacaaaacac
aacaaaaaaccaaacaacaaaaacaaactgccttactgggtgctgctggg
gtggcttcttgctattgcagcaagctgtatgaagaattcctaaagaaaat
aagaaccctgaaatgtggcatgggttca
atgttggagactattaatgtgaatgaagaacagggagagggagataagga
agagggatggaggagagggaaggaaagggagatgaatgagttggagaggg
agggagggtggtgtggttttagggtatgagatggttatctagatctaaac
tccctaattagaaatatgacttgggtgtgaaagccattgcccttggagtg
taagacctcatacctggcctctaagactttaggtgactttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_12516047_12517195
seq2: B6Ng01-088L15.b_50_1177

seq1  GAATTCCAAGATGCTCACGTTCTCTTGAGTGAAAAAAAATTTTTTTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATGCTCACGTTCTCTTGAGTGAAAAAAAATTTTTTTCTAG  50

seq1  TGTCAAACCTATTGTACCTGCTCTTGAAATTGCTAGTCCTTGGTCATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAACCTATTGTACCTGCTCTTGAAATTGCTAGTCCTTGGTCATAAT  100

seq1  CGCTAAAGATGTTGACAGAGAAGCTCTATACACACCAGTTTCAAACAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAAAGATGTTGACAGAGAAGCTCTATACACACCAGTTTCAAACAGGC  150

seq1  TCAAAGTTGGTATTCAGGTTGTAGCAATTAAAGCTTCAGGACTTGTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTTGGTATTCAGGTTGTAGCAATTAAAGCTTCAGGACTTGTGGAC  200

seq1  AATAGGAAGAACCAGCTTACAGATATGCTATTGCCACTGGTGGTGCGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAGAACCAGCTTACAGATATGCTATTGCCACTGGTGGTGCGGTG  250

seq1  TTTGGAAAAGAGGAGTTGAAATTAAATCTTGAAGATGTTCAAGCTCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAAGAGGAGTTGAAATTAAATCTTGAAGATGTTCAAGCTCATGA  300

seq1  CTTATGAAAAGTTGGAAAGATGATTGTCACCAAAGATGATGCCATGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAAAAGTTGGAAAGATGATTGTCACCAAAGATGATGCCATGCTAT  350

seq1  TGAGAGCAAAATGTGTCGAAGCTCAAATTGAAAGATATATTCCCTGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAAAATGTGTCGAAGCTCAAATTGAAAGATATATTCCCTGAGTA  400

seq1  GCTAGACATCACAGCTGGTGAATATGAAAAGAAACGGCTGAATGAGCGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACATCACAGCTGGTGAATATGAAAAGAAACGGCTGAATGAGCGGC  450

seq1  TCGCTAAACTCTCAGGAGTACCTGCGCTCAAGCATGGAGGGACAAGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTAAACTCTCAGGAGTACCTGCGCTCAAGCATGGAGGGACAAGTGGT  500

seq1  GTGGAATTGAGTGAGAAGAACGACAGTTACAGATGCTCTCAGGGCTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTGAGTGAGAAGAACGACAGTTACAGATGCTCTCAGGGCTACAA  550

seq1  GAGCAGCAGTAGACGAAGGCATTGTTCTAGGAGGGGTTGTGTCTGCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCAGTAGACGAAGGCATTGTTCTAGGAGGGGTTGTGTCTGCTTCT  600

seq1  GTGCACCCTACCCTTGGATTCATTAAAGCCTGATAATGAAGATCAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCCTACCCTTGGATTCATTAAAGCCTGATAATGAAGATCAGAAAA  650

seq1  TAGGTATAGAAATTATTAAAAGGATACTCAAAATCCCTGCAATGACAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATAGAAATTATTAAAAGGATACTCAAAATCCCTGCAATGACAATT  700

seq1  GCTAAGAATGCAGGTGTTGAAGGACCTTTCATAGTTGAGAAAATTCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAATGCAGGTGTTGAAGGACCTTTCATAGTTGAGAAAATTCTGCA  750

seq1  GAGTTCCTCAGAAGTTGGTTATGACGCCATGCTTGGAGATTTTGTGAACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTCAGAAGTTGGTTATGACGCCATGCTTGGAGATTTTGTGAACG  800

seq1  TGGTGGAAAATGGAATCATTGATTCAACTAAGGTTGTAAGAATTGCCTTA  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGTGGAAAATGGAATCATTGATTCAACTAAAGTTGTAAGAATTGCCTTA  850

seq1  CTGAGCTGGGCAGTGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGGGCAGTGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGGC  900

seq1  AGAGGCAGGAGGATTTCTGAGTTCGAGGCTAGCCTGGTCTACAAAGTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGAGGATTTCTGAGTTCGAGGCTAGCCTGGTCTACAAAGTGAG  950

seq1  CTCCAGGACAGCCAGGGCTACACAGAAAAACCTTGTCTCAAAAAACAAAA  1000
      |||||||||||||| |||||||||| ||||||||||||| ||||||||||
seq2  CTCCAGGACAGCCA-GGCTACACAG-AAAACCTTGTCTC-AAAAACAAAA  997

seq1  AACAACAAAACAAAAAAACCAAACAAACAAAAAACAAAACTGCCTTACTG  1050
       |||||      |||||||||||| ||||||||   ||||||||||||||
seq2  CACAAC------AAAAAACCAAAC-AACAAAAA--CAAACTGCCTTACTG  1038

seq1  GGTGCTGCTGGGGTGGCTTCCTTGCTAATTGCAGCCAAAGCTGTAGTGAC  1100
      ||||||||||||||||||| |||||| ||||||||  |||||||| ||| 
seq2  GGTGCTGCTGGGGTGGCTT-CTTGCT-ATTGCAGC--AAGCTGTA-TGA-  1082

seq1  AGAAATCCCTAAAGAAAATAAGGACCCTGAAATGTGTGCAATGGGTTCA  1149
      || ||| ||||||||||||||| ||||||||||||| || |||||||||
seq2  AG-AATTCCTAAAGAAAATAAGAACCCTGAAATGTG-GC-ATGGGTTCA  1128