BAC Information

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BAC

Clone NameB6Ng01-091D14
Chromosome6 (Build37)
Map Location 68,528,741 - 68,529,350
singlet/doubletsinglet
Overlap geneIgk
Upstream geneIgkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98
Downstream geneIgkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516, Gm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077, Igkv13-57-2, Gm1418, Igkv13-57-1, Gm189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091D14.bB6Ng01-091D14.g
ACCDH903309DH903310
length9961,147
definitionDH903309|Mus musculus domesticus DNA, BAC clone: B6Ng01-091D14, 5' end.DH903310|Mus musculus domesticus DNA, BAC clone: B6Ng01-091D14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaattctagtataaatagcctactgtcactcatttatccaa
cagtgtaatgtccttttccatactttattgcttgtacaataccctagatt
ctcaattgcatgaataatcattattgcttgtgaattttcttgggtagctt
gttccaaactcagccttcaatagttgttttcaatgtgtatcttagagtta
ctactactgtgaagagagatcatcatagagagaaatttaaggtaatatca
cttcctggtcccattctagctcctaaatgtttcataaaaatacctattac
atttattatcaagttttaagcactatggatgggtagataatcatctattt
ttaccttctacgttatcttagctacttccaagtcatatgtcctttgtcac
atgcctcctcagttttgcctggatttgctttactccatatatatcttcat
ggaaaatcctttgacaacctgttctctacaattcatcctgaatccccttc
ctcatagccacatcttctctttttcctttcccctttgtgacctgtaacct
cccctccccagcctgaaacctgtttgctcaggtttaagtgttagagagca
ttggggcagagcttgccccaatcgtcctgccactcccactgcagctgcct
gccatcgcctgccacctagctcttctggagctatcacgtgttcacgtgtt
cacctgcaaccttactccaagatgatttggtgggaatcgggccccttccc
ctccttcataattcggtgcacgaattagtaaagttgagctttgattagaa
ttttatcttagcttcatctttctctcgtccgcctagctccctcttctctt
ccagattccaagatgcctttccagactagaacccagacatgtgagccact
ggccggacacaacagtgaccctcttcctgggatccaaagtcttcccttct
ctgtctagctgtaggatgatcaactctaattaaactatagagatca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tttagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccactcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgagaatgtggagaaagaggaacactcctccactgttggta
ggattgcaagcttgtacaaccactctggaaatcagtctggctgtttctca
gaaaattggacatagtactttcagagaatcccgcaataccttttttgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagcctaatttataatagccagaacctggaaagaacccagat
gcccctcaacagaagaatggatacagaaaatgtggtatatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggaaggcatcatcctgagtgagataacccaatcacaaa
ggaactcacacattatgtactcattgataattggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaatgcgtgaaactcaa
gaagaatgaaaaccaaagtgtggacactttgcccctacttagaatttgga
acaaaacacccatggaaggagttatagagacaaattttggagctgtgacg
aaaggatggaccttctagagattgccatatccggggatccagcccataat
cagcttccaaacgctgacaccattgcataaactagcaagattttgctgaa
agacccagatatacatgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctattgggatgtatcacagggcccca
atggagagctagagaaagtatccaagagctaaaggggtctgcactctata
gtggaacaacattgtgactactcgtacctgagctcttgtctctatctgca
ttgtatcaaagatgctagtgacatcactgaagagtgcccactgggcttgc
aacttaattgcccagtaaggatgcccggcaaacgtggaatggttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_68528741_68529350
seq2: B6Ng01-091D14.b_47_656 (reverse)

seq1  TCTGCCCCAATGCTCTCTAACACTTAAACCTGAGCAAACAGGTTTCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCCAATGCTCTCTAACACTTAAACCTGAGCAAACAGGTTTCAGGC  50

seq1  TGGGGAGGGGAGGTTACAGGTCACAAAGGGGAAAGGAAAAAGAGAAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGGGAGGTTACAGGTCACAAAGGGGAAAGGAAAAAGAGAAGATG  100

seq1  TGGCTATGAGGAAGGGGATTCAGGATGAATTGTAGAGAACAGGTTGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGAGGAAGGGGATTCAGGATGAATTGTAGAGAACAGGTTGTCAA  150

seq1  AGGATTTTCCATGAAGATATATATGGAGTAAAGCAAATCCAGGCAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTCCATGAAGATATATATGGAGTAAAGCAAATCCAGGCAAAACT  200

seq1  GAGGAGGCATGTGACAAAGGACATATGACTTGGAAGTAGCTAAGATAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGCATGTGACAAAGGACATATGACTTGGAAGTAGCTAAGATAACG  250

seq1  TAGAAGGTAAAAATAGATGATTATCTACCCATCCATAGTGCTTAAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTAAAAATAGATGATTATCTACCCATCCATAGTGCTTAAAACTT  300

seq1  GATAATAAATGTAATAGGTATTTTTATGAAACATTTAGGAGCTAGAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAAATGTAATAGGTATTTTTATGAAACATTTAGGAGCTAGAATGG  350

seq1  GACCAGGAAGTGATATTACCTTAAATTTCTCTCTATGATGATCTCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGAAGTGATATTACCTTAAATTTCTCTCTATGATGATCTCTCTTC  400

seq1  ACAGTAGTAGTAACTCTAAGATACACATTGAAAACAACTATTGAAGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGTAGTAACTCTAAGATACACATTGAAAACAACTATTGAAGGCTG  450

seq1  AGTTTGGAACAAGCTACCCAAGAAAATTCACAAGCAATAATGATTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGAACAAGCTACCCAAGAAAATTCACAAGCAATAATGATTATTCA  500

seq1  TGCAATTGAGAATCTAGGGTATTGTACAAGCAATAAAGTATGGAAAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTGAGAATCTAGGGTATTGTACAAGCAATAAAGTATGGAAAAGGA  550

seq1  CATTACACTGTTGGATAAATGAGTGACAGTAGGCTATTTATACTAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACACTGTTGGATAAATGAGTGACAGTAGGCTATTTATACTAGAATT  600

seq1  CTCTGAATTC  610
      ||||||||||
seq2  CTCTGAATTC  610