BAC Information

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BAC

Clone NameB6Ng01-091K23
Chromosome6 (Build37)
Map Location 61,908,328 - 62,031,381
singlet/doubletdoublet
Overlap geneC130092O11Rik
Upstream geneMmrn1, LOC100041756, LOC100041764, LOC100042694
Downstream geneGA_x5J8B7W6GG0-4757855-4757501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K23.bB6Ng01-091K23.g
ACCDH903644DH903645
length5091,097
definitionDH903644|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K23, 5' end.DH903645|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,030,868 - 62,031,381)(61,908,328 - 61,909,431)
sequence
atagttagagtggtaaacctagtcagaacctcatggatcatatcattaac
cctagggatttatgctcatactctagaagtaaaactagaactattacatt
gttgagtggatatgctgtcaaacaaacttcagaatatttatgcttacacc
catagatggatggaataaagaacctttggccagagaagctttttgaagtg
tagagcagccaaaatagagacccaagcttgtcagaatacagagagtaagt
gattattggatgctcagccttctaaaggacctatattatgacatacctgc
ataccaataatttgactaaatttgttagagagggagggaatgaggatgga
gggagcaaaataaaaatgaaggtggcaaatgtcttagatattctgtatat
gttagttagtgtgtagggaattggatgatggtatgatcaagacatggtat
atgtacatggaattgccagagaataaaaggcatttctaaaaatactgaaa
aattcacta
gaattctcagttcttttattactttgcaggtctaaaggagaaaagcaggc
agggatacttgacattttatcaaatcccaatcaaattcataccatgcatg
catcaggtaaatcttacaatctaagagtgctgaaccattaaataattcta
attaataaaaaggaaagcataagggctgaagagatagtgtggcagttaat
tgcatttactgttctaagagaagacccatgttcagttccgatcattcaca
tagcaacttaaagctacttgtaactccagtatcagaagatctgattcctt
tttcgggtcttcattcacagacactacacacatgtaatacacagacatgc
ataaggacaaaacacccagacaccacacacacacacacacacacacacac
acacacacacaaacacaaaaattttaaagaaaggaacatctttatcctga
cttttagagctttaatcacaatatactattaactaattcatagaattaaa
atataataactaaaatcatcaaagactctctaaatcaaagcctgtattca
aagaaaccaagaatcagatatttaaagttgtataagagctacccatcaaa
atggctcagcgggtaagggtacttgacctctcttctagcacgactgggta
aggccatggctcctgaggatgacatcagagactctcataggtgcagtgac
tgcttttctttggaagtactaaagcatgttgacatacagaacacactgat
tacttcttatgtgatagtaccttctaagcagcagtgctatagttcctctg
tccttgttcggtgctctcagggacacctatggggaaggatacattatatc
cttgcaaaaatagggtaatattgttaagcccgtggaaaatataatttcat
ttcatcagtaaacattattttttaagattaacactactctaaaaacacat
tgtttggtcttcactgaaaagagtctcattgaagtctgctctaattttgc
attgcctcctatttattttttttctgtaaatacaatatgtataaggaata
tatcaatggtgtacttaataaaatattctgctccagtatttttgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_62030868_62031381
seq2: B6Ng01-091K23.b_48_562 (reverse)

seq1  TTGTGAATTTTTCAGTTTTTTTAG-AATGCCTTTTATTCTCTGGCAATTC  49
      | |||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  TAGTGAATTTTTCAGTATTTTTAGAAATGCCTTTTATTCTCTGGCAATTC  50

seq1  CATGTACATATACCATGTCTTGATCATACCATCATCCAATTCCCTACACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATATACCATGTCTTGATCATACCATCATCCAATTCCCTACACA  100

seq1  CTAACTAACATATACAGAATATCTAAGACATTTGCCACCTTCATTTTTAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAACATATACAGAATATCTAAGACATTTGCCACCTTCATTTTTAT  150

seq1  TTTGCTCCCTCCATCCTCATTCCCTCCCTCTCTAACAAATTTAGTCAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCCCTCCATCCTCATTCCCTCCCTCTCTAACAAATTTAGTCAAAT  200

seq1  TATTGGTATGCAGGTATGTCATAATATAGGTCCTTTAGAAGGCTGAGCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTATGCAGGTATGTCATAATATAGGTCCTTTAGAAGGCTGAGCAT  250

seq1  CCAATAATCACTTACTCTCTGTATTCTGACAAGCTTGGGTCTCTATTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATCACTTACTCTCTGTATTCTGACAAGCTTGGGTCTCTATTTTG  300

seq1  GCTGCTCTACACTTCAAAAAGCTTCTCTGGCCAAAGGTTCTTTATTCCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTACACTTCAAAAAGCTTCTCTGGCCAAAGGTTCTTTATTCCAT  350

seq1  CCATCTATGGGTGTAAGCATAAATATTCTGAAGTTTGTTTGACAGCATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTATGGGTGTAAGCATAAATATTCTGAAGTTTGTTTGACAGCATAT  400

seq1  CCACTCAACAATGTAATAGTTCTAGTTTTACTTCTAGAGTATGAGCATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAACAATGTAATAGTTCTAGTTTTACTTCTAGAGTATGAGCATAA  450

seq1  ATCCCTAGGGTTAATGATATGATCCATGAGGTTCTGACTAGGTTTACCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAGGGTTAATGATATGATCCATGAGGTTCTGACTAGGTTTACCAC  500

seq1  TCTAACTATGAATTC  514
      |||||||||||||||
seq2  TCTAACTATGAATTC  515

seq1: chr6_61908328_61909431
seq2: B6Ng01-091K23.g_70_1166

seq1  GAATTCTCAGTTCTTTTATTACTTTGCAGGTCTAAAGGAGAAAAGCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTCTTTTATTACTTTGCAGGTCTAAAGGAGAAAAGCAGGC  50

seq1  AGGGATACTTGACATTTTATCAAATCCCAATCAAATTCATACCATGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATACTTGACATTTTATCAAATCCCAATCAAATTCATACCATGCATG  100

seq1  CATCAGGTAAATCTTACAATCTAAGAGTGCTGAACCATTAAATAATTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGTAAATCTTACAATCTAAGAGTGCTGAACCATTAAATAATTCTA  150

seq1  ATTAATAAAAAGGAAAGCATAAGGGCTGAAGAGATAGTGTGGCAGTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAAAAAGGAAAGCATAAGGGCTGAAGAGATAGTGTGGCAGTTAAT  200

seq1  TGCATTTACTGTTCTAAGAGAAGACCCATGTTCAGTTCCGATCATTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTACTGTTCTAAGAGAAGACCCATGTTCAGTTCCGATCATTCACA  250

seq1  TAGCAACTTAAAGCTACTTGTAACTCCAGTATCAGAAGATCTGATTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTTAAAGCTACTTGTAACTCCAGTATCAGAAGATCTGATTCCTT  300

seq1  TTTCGGGTCTTCATTCACAGACACTACACACATGTAATACACAGACATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGGTCTTCATTCACAGACACTACACACATGTAATACACAGACATGC  350

seq1  ATAAGGACAAAACACCCAGACACCACACACACACACACACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGACAAAACACCCAGACACCACACACACACACACACACACACACAC  400

seq1  ACACACACACAAACACAAAAATTTTAAAGAAAGGAACATCTTTATCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAAACACAAAAATTTTAAAGAAAGGAACATCTTTATCCTGA  450

seq1  CTTTTAGAGCTTTAATCACAATATACTATTAACTAATTCATAGAATTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGAGCTTTAATCACAATATACTATTAACTAATTCATAGAATTAAA  500

seq1  ATATAATAACTAAAATCATCAAAGACTCTCTAAATCAAAGCCTGTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAACTAAAATCATCAAAGACTCTCTAAATCAAAGCCTGTATTCA  550

seq1  AAGAAACCAAGAATCAGATATTTAAAGTTGTATAAGAGCTACCCATCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCAAGAATCAGATATTTAAAGTTGTATAAGAGCTACCCATCAAA  600

seq1  ATGGCTCAGCGGGTAAGGGTACTTGACCTCTCTTCTAGCACGACTGGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAGCGGGTAAGGGTACTTGACCTCTCTTCTAGCACGACTGGGTA  650

seq1  AGGCCATGGCTCCTGAGGATGACATCAGAGACTCTCATAGGTGCAGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATGGCTCCTGAGGATGACATCAGAGACTCTCATAGGTGCAGTGAC  700

seq1  TGCTTTTCTTTGGAAGTACTAAAGCATGTTGACATACAGAACACACTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTTTGGAAGTACTAAAGCATGTTGACATACAGAACACACTGAT  750

seq1  TACTTCTTATGTGATAGTACCTTCTAAGCAGCAGTGCTATAGTTCCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTATGTGATAGTACCTTCTAAGCAGCAGTGCTATAGTTCCTCTG  800

seq1  TCCTTGTTCGGTGCTCTCAGGGACACCTATGGGGAAGGATACATTATATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTCGGTGCTCTCAGGGACACCTATGGGGAAGGATACATTATATC  850

seq1  CTTGCAAAAATAGGGTAATATTGTTAAG-CCGTGGAAAATATAA-TTCAT  898
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  CTTGCAAAAATAGGGTAATATTGTTAAGCCCGTGGAAAATATAATTTCAT  900

seq1  TTCATCAGTAAACATTA-TTTTTAAGATTAACACTACTCTAAAAACACAT  947
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCATCAGTAAACATTATTTTTTAAGATTAACACTACTCTAAAAACACAT  950

seq1  TGTTTGGTCTTCACTGAAAAGAGTTCTCATTGAAGTCTGCTTCTAATTTT  997
      ||||||||||||||||||||||| |||||||||||||||| ||||| |||
seq2  TGTTTGGTCTTCACTGAAAAGAG-TCTCATTGAAGTCTGC-TCTAA-TTT  997

seq1  TGCATTGCCTCCTATTTTATTTTTTTCTGTAAATACAATTATGTATAAGG  1047
      |||||||||||||||||  ||||||||||||||||||| |||||||||||
seq2  TGCATTGCCTCCTATTTATTTTTTTTCTGTAAATACAA-TATGTATAAGG  1046

seq1  AATATATCAATGGTGTACTTTAAATTAAAATATATTGCCTCACAAGTATT  1097
      ||||||||||||||||||||   | ||||||||  ||   | | ||||||
seq2  AATATATCAATGGTGTACTT---AATAAAATATTCTG---CTCCAGTATT  1090

seq1  TTTGACT  1104
      |||||||
seq2  TTTGACT  1097