BAC Information

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BAC

Clone NameB6Ng01-092D22
Chromosome6 (Build37)
Map Location 13,586,017 - 13,725,976
singlet/doubletdoublet
Overlap geneB630005N14Rik
Upstream geneThsd7a, LOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168
Downstream geneGpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797, Ppp1r3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092D22.bB6Ng01-092D22.g
ACCDH904058DH904059
length1,1101,046
definitionDH904058|Mus musculus domesticus DNA, BAC clone: B6Ng01-092D22, 5' end.DH904059|Mus musculus domesticus DNA, BAC clone: B6Ng01-092D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,724,863 - 13,725,976)(13,586,017 - 13,587,066)
sequence
gaattccacttctgccttctgaatctagaattacagggtcgacatcattc
ccacttagtcttcacatgggtcctgagaatctgaactcttattttcacac
ttggatggcaaatgcttagccagtcagccatctgtctggcctgtttttgc
aggaatagtttgttattattctgtgtcttttgtgtactttactgttaagg
tccaagtccatctctaaggccatttttaactggttagtgaaaactattac
atatgtttaggccaaccacaaagaatgtgtcaaaacatctatgaagaatc
taactgactgcattacacctgacaatatctgaaataaccgacatgataca
aactaatatcagcacttcagtacttactgagtaaaccaaaaccataccag
gtttacttaaggtcatgtgtgagttatttgcttgccaatggtaatcaatc
taccagtggttaaaatgccatagagtctaccccatgaacacaaaagcagc
acaaaatgaactcagtgggtttaaaagagaggatctcagagttagaagag
acaggtatcgggggaggcaccaagaggagctggaaggaaagagtgggggt
ggatatcatcaagatgtattgtccacatgtatgaaatttccaataataaa
taaaaataaatttaaggcactttctcttcaaaaaaatgtaatgcctgagg
caacatctcagttgttaaaatgcatgcattgcaagaaagaccccagagtc
acataaaaatctaggcatgttggtgcacgcattgtatcccaacagatcta
aatggacctataggtctcactaccagcaaagtctagcctatttgatgaga
tccagactcataatgtagcctgtctcagatgaagtggaccatgcttccaa
gggtgacacctgaggctatcctaagaactccatgtagacacacacccaat
gttgtataccaatttttctcagaattgatacatttcagtcctggagaaat
gctccttaacctcagaatattctaaatgggggtgaccatttcatcctgca
gaaagtgttcttaggtttcaggagtagcacatagaatctttagaaaagtc
ctggaactga
gaattcatttcttaaattatctttttatactttgtgtaaagtatcactac
gtttccattagattaaattaaattgaatttcagttaacaaatcaataata
atttgctttaggtagtaaatctaaatagtgatgggtacatatttcacaga
attatattaaaaatattataaccttagactaagaagatgtttaaatgatt
taaaactcttataaagaaggtatatttattttatatgttcctccaaaaag
tatttatttcagtagaaaatattttgtacttgtgattttcctttaaatat
aatatattccagatatttggatcatgattctggtctcatgactatttccc
agctgagctgttacccagatggtatttgaatttgtattatcattacattc
attcttgaccaatactttgagtccttaccagaaaggtcagaattttggaa
ctttatctatttcttcccatttttcaaaagtagcttgaaaagtagacact
attggtctttaaatttatctactatttgcttttcatatacattcattcta
tatatttttagcttacagccctctgagtttagttattgttgccagtatgt
tcacagacacaggggatggataacctaagacaggccatgcctctccagaa
aactaactcctcctccacagtcagccatctactataaatagcgctcagat
aggagtggagccttgtgagtccctctccctccatgctggaatgctgcctg
acttgatcttctgcagatctcagatagggagctacagatgctttgagttc
gtgagtacaatgatcctgtcatatcaaaaaccacttgacctcttgacctc
tagttcttataatcttccacagtgttcccaaagccttgtgggtagggact
gactaatagaagtctcattcagagctcagcactcctcagtcacttttatg
tgtagtttgttcagttgcgaatctctatcagccacactggcttatgaagg
tgtgatggcttgtactttcaacacaacagcagtcttataggacgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13724863_13725976
seq2: B6Ng01-092D22.b_44_1153 (reverse)

seq1  TCAGTTTCAGGGACTTTCTGAGGATTCTATGTTGCTTACTTCCTG-AATC  49
      |||||| ||||   ||||| | ||||||||| ||| ||| ||||| || |
seq2  TCAGTTCCAGGACTTTTCTAAAGATTCTATG-TGC-TAC-TCCTGAAACC  47

seq1  TTAGGACACTTTTCTGCAGGATGAAATGGTTCACCCCCATTTAGAATATT  99
      | || |||| ||||||||||||||||||| ||||||||||||||||||||
seq2  TAAGAACAC-TTTCTGCAGGATGAAATGG-TCACCCCCATTTAGAATATT  95

seq1  CTGAGGTTTAAGGAGCATTTCTCCAGGACTG-AATGTATCAATTCTGGAG  148
      |||||| |||||||||||||||||||||||| |||||||||||||||   
seq2  CTGAGG-TTAAGGAGCATTTCTCCAGGACTGAAATGTATCAATTCTGAGA  144

seq1  AAAATTGGTATACAACATTGGGTGTGTGTCTACATGGAGTTCTTAGGATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGTATACAACATTGGGTGTGTGTCTACATGGAGTTCTTAGGATA  194

seq1  GCCTCAGGTGTCACCCTTGGAAGCATGGTCCACTTCATCTGAGACAGGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGTGTCACCCTTGGAAGCATGGTCCACTTCATCTGAGACAGGCT  244

seq1  ACATTATGAGTCTGGATCTCATCAAATAGGCTAGACTTTGCTGGTAGTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATGAGTCTGGATCTCATCAAATAGGCTAGACTTTGCTGGTAGTGA  294

seq1  GACCTATAGGTCCATTTAGATCTGTTGGGATACAATGCGTGCACCAACAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATAGGTCCATTTAGATCTGTTGGGATACAATGCGTGCACCAACAT  344

seq1  GCCTAGATTTTTATGTGACTCTGGGGTCTTTCTTGCAATGCATGCATTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGATTTTTATGTGACTCTGGGGTCTTTCTTGCAATGCATGCATTTT  394

seq1  AACAACTGAGATGTTGCCTCAGGCATTACATTTTTTTGAAGAGAAAGTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTGAGATGTTGCCTCAGGCATTACATTTTTTTGAAGAGAAAGTGC  444

seq1  CTTAAATTTATTTTTATTTATTATTGGAAATTTCATACATGTGGACAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTTATTTTTATTTATTATTGGAAATTTCATACATGTGGACAATA  494

seq1  CATCTTGATGATATCCACCCCCACTCTTTCCTTCCAGCTCCTCTTGGTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGATGATATCCACCCCCACTCTTTCCTTCCAGCTCCTCTTGGTGC  544

seq1  CTCCCCCGATACCTGTCTCTTCTAACTCTGAGATCCTCTCTTTTAAACCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCGATACCTGTCTCTTCTAACTCTGAGATCCTCTCTTTTAAACCC  594

seq1  ACTGAGTTCATTTTGTGCTGCTTTTGTGTTCATGGGGTAGACTCTATGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTCATTTTGTGCTGCTTTTGTGTTCATGGGGTAGACTCTATGGC  644

seq1  ATTTTAACCACTGGTAGATTGATTACCATTGGCAAGCAAATAACTCACAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACCACTGGTAGATTGATTACCATTGGCAAGCAAATAACTCACAC  694

seq1  ATGACCTTAAGTAAACCTGGTATGGTTTTGGTTTACTCAGTAAGTACTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTTAAGTAAACCTGGTATGGTTTTGGTTTACTCAGTAAGTACTGA  744

seq1  AGTGCTGATATTAGTTTGTATCATGTCGGTTATTTCAGATATTGTCAGGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGATATTAGTTTGTATCATGTCGGTTATTTCAGATATTGTCAGGT  794

seq1  GTAATGCAGTCAGTTAGATTCTTCATAGATGTTTTGACACATTCTTTGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGCAGTCAGTTAGATTCTTCATAGATGTTTTGACACATTCTTTGTG  844

seq1  GTTGGCCTAAACATATGTAATAGTTTTCACTAACCAGTTAAAAATGGCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCTAAACATATGTAATAGTTTTCACTAACCAGTTAAAAATGGCCT  894

seq1  TAGAGATGGACTTGGACCTTAACAGTAAAGTACACAAAAGACACAGAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGGACTTGGACCTTAACAGTAAAGTACACAAAAGACACAGAATA  944

seq1  ATAACAAACTATTCCTGCAAAAACAGGCCAGACAGATGGCTGACTGGCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAACTATTCCTGCAAAAACAGGCCAGACAGATGGCTGACTGGCTA  994

seq1  AGCATTTGCCATCCAAGTGTGAAAATAAGAGTTCAGATTCTCAGGACCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGCCATCCAAGTGTGAAAATAAGAGTTCAGATTCTCAGGACCCA  1044

seq1  TGTGAAGACTAAGTGGGAATGATGTCGACCCTGTAATTCTAGATTCAGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGACTAAGTGGGAATGATGTCGACCCTGTAATTCTAGATTCAGAA  1094

seq1  GGCAGAAGTGGAATTC  1114
      ||||||||||||||||
seq2  GGCAGAAGTGGAATTC  1110

seq1: chr6_13586017_13587066
seq2: B6Ng01-092D22.g_68_1113

seq1  GAATTCATTTCTTAAATTATCTTTTTATACTTTGTGTAAAGTATCACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTTAAATTATCTTTTTATACTTTGTGTAAAGTATCACTAC  50

seq1  GTTTCCATTAGATTAAATTAAATTGAATTTCAGTTAACAAATCAATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATTAGATTAAATTAAATTGAATTTCAGTTAACAAATCAATAATA  100

seq1  ATTTGCTTTAGGTAGTAAATCTAAATAGTGATGGGTACATATTTCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTAGGTAGTAAATCTAAATAGTGATGGGTACATATTTCACAGA  150

seq1  ATTATATTAAAAATATTATAACCTTAGACTAAGAAGATGTTTAAATGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTAAAAATATTATAACCTTAGACTAAGAAGATGTTTAAATGATT  200

seq1  TAAAACTCTTATAAAGAAGGTATATTTATTTTATATGTTCCTCCAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCTTATAAAGAAGGTATATTTATTTTATATGTTCCTCCAAAAAG  250

seq1  TATTTATTTCAGTAGAAAATATTTTGTACTTGTGATTTTCCTTTAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTCAGTAGAAAATATTTTGTACTTGTGATTTTCCTTTAAATAT  300

seq1  AATATATTCCAGATATTTGGATCATGATTCTGGTCTCATGACTATTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTCCAGATATTTGGATCATGATTCTGGTCTCATGACTATTTCCC  350

seq1  AGCTGAGCTGTTACCCAGATGGTATTTGAATTTGTATTATCATTACATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGCTGTTACCCAGATGGTATTTGAATTTGTATTATCATTACATTC  400

seq1  ATTCTTGACCAATACTTTGAGTCCTTACCAGAAAGGTCAGAATTTTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGACCAATACTTTGAGTCCTTACCAGAAAGGTCAGAATTTTGGAA  450

seq1  CTTTATCTATTTCTTCCCATTTTTCAAAAGTAGCTTGAAAAGTAGACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTATTTCTTCCCATTTTTCAAAAGTAGCTTGAAAAGTAGACACT  500

seq1  ATTGGTCTTTAAATTTATCTACTATTTGCTTTTCATATACATTCATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCTTTAAATTTATCTACTATTTGCTTTTCATATACATTCATTCTA  550

seq1  TATATTTTTAGCTTACAGCCCTCTGAGTTTAGTTATTGTTGCCAGTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTAGCTTACAGCCCTCTGAGTTTAGTTATTGTTGCCAGTATGT  600

seq1  TCACAGACACAGGGGATGGATAACCTAAGACAGGCCATGCCTCTCCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACACAGGGGATGGATAACCTAAGACAGGCCATGCCTCTCCAGAA  650

seq1  AACTAACTCCTCCTCCACAGTCAGCCATCTACTATAAATAGCGCTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTCCTCCTCCACAGTCAGCCATCTACTATAAATAGCGCTCAGAT  700

seq1  AGGAGTGGAGCCTTGTGAGTCCCTCTCCCTCCATGCTGGAATGCTGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGAGCCTTGTGAGTCCCTCTCCCTCCATGCTGGAATGCTGCCTG  750

seq1  ACTTGATCTTCTGCAGATCTCAGATAGGGAGCTACAGATGCTTTGAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATCTTCTGCAGATCTCAGATAGGGAGCTACAGATGCTTTGAGTTC  800

seq1  GTGAGTACAATGATCCTGTCATATCAAAAACCACTTGACCTCTTGACCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTACAATGATCCTGTCATATCAAAAACCACTTGACCTCTTGACCTC  850

seq1  TAGTTCTTATAATCTTCCACAGTGTTCCCAAAGCCTTGTGGGTAGGGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTATAATCTTCCACAGTGTTCCCAAAGCCTTGTGGGTAGGGACT  900

seq1  GACTAATAGAAGTCTCATTCAGAGCTCAGCACTCCTCAGTCACTTTTATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATAGAAGTCTCATTCAGAGCTCAGCACTCCTCAGTCACTTTTATG  950

seq1  TGTAGTTTGTTCAGTTGCGAATCTCTATCAGCCACCACTGGCTTATGAAG  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TGTAGTTTGTTCAGTTGCGAATCTCTATCAGCCA-CACTGGCTTATGAA-  998

seq1  GGTGTGATGGCTTGTAACTTTCAACACAAACAGCAGTCTTATAGGACGAC  1050
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  GGTGTGATGGCTTGT-ACTTTCAACAC-AACAGCAGTCTTATAGGACGAC  1046