BAC Information

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BAC

Clone NameB6Ng01-092F03
Chromosome6 (Build37)
Map Location 125,955,503 - 125,956,546
singlet/doubletsinglet
Overlap geneTmem16b
Upstream geneZfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
Downstream geneNtf3, LOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092F03.bB6Ng01-092F03.g
ACCDH904112DH904113
length1,046775
definitionDH904112|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F03, 5' end.DH904113|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattataaaggcaagtttgtcacctcttgttctatattctcttgt
gctctgttgcccttctgccttccccggtgggatgacacagcaaggagtgt
ctcatcagttgcttgaacttttgagagtccagagccatgagccaaatcca
tttttattgtgtttaagttacccagcctgtggcattctgttacagcaaca
cgaacctgactaagataaacagcttgctactatcctgctaagagctcaag
aaagcactcaggaaaacgagcacacaaacatcttagtcagtgtcacagag
tctgacagcagctgcaatcactgcatgctgtggagccagcaccaggcagg
aataacttgttcccctcagtaggtccctggaaagcacacaattagtcact
ggtgggtttgcctccaagaccaagaaaaagaaatgcagaaggcctgtttg
atgccgaaagttaagatctttcctgctcagatgactgacatccacaagct
ccctaggaaataaacacagcaaggaaaactcaattccattctgtctgcag
tttacacaattgcctgggcccgctccggaagcagagacagaagagacagg
ctggtagcacctatttaaacatgaagaatttgatgcatgccgggcagtgg
tggcacacacctttaatcccagcacttgggagtcagaggcaggcggattt
ctgagttcaaggccagcctggtctacaaagtgagttccaggacagccagg
gctatacagagaaaccctgtctcaaaaccaaaaagaagaatttgatgcac
gaaatgccagtgcaacacctggaccaaccactaaggagaggattctcctg
aatacatgcatggatacatggagtgatctgcttgctcttgtttaccttcc
acatgcacacaccacacacacacaacacataccacacacataccatacac
acacacagagaaacatatacacacacacacacacacacacatcatacaca
cagataccatacacacacaacatacgtacacccccacccacacaca
gaattcttttcaggtttatagtagttggcatgtgttgcctcttgtggagt
ggtcctcagataattatagagtcattggttacctccactacagtcatgcc
attgatgcagcagtgggcacatcttgcctggaaagttggtgtttgtctta
gtttggattttactgctgtgaacagacaccatgatcaagccaacttgcat
aaggacatttaagtgggactggttcagaggttcagttcattatcatcaag
gctggagtaaggcagcatctaggtaggcatggtggaggaggggttgagtg
ttctacatctccacctgaaggccactagaagactgactcccatgtggtta
agaggagggtctgagtgcccaccctcatagtgacacacttccttcaacaa
ggtcacaccttctcccacaaggctacactcactccaacaaggtcacacct
cctgatagtgccactctctggaccaaccgtattcaaactaccacagtatt
gtagttcagagagttcacaactgggtaagaagtctggtctgttactgtcc
ctgcagtctgaatagtgctggcactctacaggctaggcagcagcatgcag
ttcccagcttagtttcagctagatttctctaaatcttgcatccatggtgt
gtggtggttttagcaataaagtcatatcaactactggtgatggtgaaatg
gcaagagcctttattgtttgtggcattctggggccatttgctggccaaca
gttcttatggaggtatcccatatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_125955503_125956546
seq2: B6Ng01-092F03.b_44_1089 (reverse)

seq1  --TGTGTGTGT---GGTGTATGTATGTTGTGTGTGTATGGTATCTGTGTT  45
        |||||| ||   |||||| ||||||||||||||||||||||||||| |
seq2  TGTGTGTGGGTGGGGGTGTACGTATGTTGTGTGTGTATGGTATCTGTG-T  49

seq1  GTATGATGTGTGGTGTGTGTGTGGTGTGTGTATATGTTTCTCTGTGTGTG  95
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  GTATGATGTGT-GTGTGTGTGT-GTGTGTGTATATGTTTCTCTGTGTGTG  97

seq1  TGTATGGTATGTGTGTGGTATGTGTTGTGTGTGTGTGGTGTGTGCATGTG  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGTATGTGTGTGGTATGTGTTGTGTGTGTGTGGTGTGTGCATGTG  147

seq1  GAAGGTAAACAAGAGCAAGCAGATCACTCCATGTATCCATGCATGTATTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAAACAAGAGCAAGCAGATCACTCCATGTATCCATGCATGTATTC  197

seq1  AGGAGAATCCTCTCCTTAGTGGTTGGTCCAGGTGTTGCACTGGCATTTCG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATCCTCTCCTTAGTGGTTGGTCCAGGTGTTGCACTGGCATTTCG  247

seq1  TGCATCAAATTCTTCTTTTTGGTTTTGAGACAGGGTTTCTCTGTATAGCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAAATTCTTCTTTTTGGTTTTGAGACAGGGTTTCTCTGTATAGCC  297

seq1  CTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGA  347

seq1  AATCCGCCTGCCTCTGACTCCCAAGTGCTGGGATTAAAGGTGTGTGCCAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCGCCTGCCTCTGACTCCCAAGTGCTGGGATTAAAGGTGTGTGCCAC  397

seq1  CACTGCCCGGCATGCATCAAATTCTTCATGTTTAAATAGGTGCTACCAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCCGGCATGCATCAAATTCTTCATGTTTAAATAGGTGCTACCAGC  447

seq1  CTGTCTCTTCTGTCTCTGCTTCCGGAGCGGGCCCAGGCAATTGTGTAAAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTCTGTCTCTGCTTCCGGAGCGGGCCCAGGCAATTGTGTAAAC  497

seq1  TGCAGACAGAATGGAATTGAGTTTTCCTTGCTGTGTTTATTTCCTAGGGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACAGAATGGAATTGAGTTTTCCTTGCTGTGTTTATTTCCTAGGGA  547

seq1  GCTTGTGGATGTCAGTCATCTGAGCAGGAAAGATCTTAACTTTCGGCATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGGATGTCAGTCATCTGAGCAGGAAAGATCTTAACTTTCGGCATC  597

seq1  AAACAGGCCTTCTGCATTTCTTTTTCTTGGTCTTGGAGGCAAACCCACCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCCTTCTGCATTTCTTTTTCTTGGTCTTGGAGGCAAACCCACCA  647

seq1  GTGACTAATTGTGTGCTTTCCAGGGACCTACTGAGGGGAACAAGTTATTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAATTGTGTGCTTTCCAGGGACCTACTGAGGGGAACAAGTTATTC  697

seq1  CTGCCTGGTGCTGGCTCCACAGCATGCAGTGATTGCAGCTGCTGTCAGAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGTGCTGGCTCCACAGCATGCAGTGATTGCAGCTGCTGTCAGAC  747

seq1  TCTGTGACACTGACTAAGATGTTTGTGTGCTCGTTTTCCTGAGTGCTTTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACACTGACTAAGATGTTTGTGTGCTCGTTTTCCTGAGTGCTTTC  797

seq1  TTGAGCTCTTAGCAGGATAGTAGCAAGCTGTTTATCTTAGTCAGGTTCGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCTTAGCAGGATAGTAGCAAGCTGTTTATCTTAGTCAGGTTCGT  847

seq1  GTTGCTGTAACAGAATGCCACAGGCTGGGTAACTTAAACACAATAAAAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTAACAGAATGCCACAGGCTGGGTAACTTAAACACAATAAAAAT  897

seq1  GGATTTGGCTCATGGCTCTGGACTCTCAAAAGTTCAAGCAACTGATGAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGCTCATGGCTCTGGACTCTCAAAAGTTCAAGCAACTGATGAGA  947

seq1  CACTCCTTGCTGTGTCATCCCACCGGGGAAGGCAGAAGGGCAACAGAGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTGCTGTGTCATCCCACCGGGGAAGGCAGAAGGGCAACAGAGCA  997

seq1  CAAGAGAATATAGAACAAGAGGTGACAAACTTGCCTTTATAATGAATTC  1044
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAATATAGAACAAGAGGTGACAAACTTGCCTTTATAATGAATTC  1046