BAC Information

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BAC

Clone NameB6Ng01-092K06
Chromosome6 (Build37)
Map Location 24,841,364 - 24,842,524
singlet/doubletsinglet
Overlap geneHyal5
Upstream geneTas2r118, LOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1
Downstream gene6332401O19Rik, LOC384358, Gpr37, Pot1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092K06.bB6Ng01-092K06.g
ACCDH904346DH904347
length1,1501,213
definitionDH904346|Mus musculus domesticus DNA, BAC clone: B6Ng01-092K06, 5' end.DH904347|Mus musculus domesticus DNA, BAC clone: B6Ng01-092K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaatgactatctccacttgaaccctcagaactttcagattcatt
ttgtgaaacatggaaagtatgaaatccgtggcaatcccacccttgagaac
ctgctatacttttcccaaaaattccgttgcagctgttttgcccacctgaa
ctgtcaggagagagctgacatagaaagtgttagcactgtcagtgtgtgta
ctctggaagacatttgcatcaattcccttgtaatttcagacaaaagcgaa
ctacccaaggactggaatcgcccttactttgttaatagcaatcagtcaga
tattacatcatctgccacagtgagtccatgtgtgccaagaaaagatgtca
gtgggtatctcgttgttctctctctctattcacagcatttgaaatattcg
ctatagagttttaaccactcaaaaactggacaccacctttcaaaaataat
tccatctaaataatcaggattatactttgaatttcagaggcaaaatatat
attcttatatataagaaattctgattgtaaggctgtcatactttcagggt
taatggtctactgagaagagtgaagattaaataaaatcaagttgctataa
atgaatgtctttcagtaatttgtttttagaagtatgctattggttcaaat
ttggcaatgtttttgatcaatttatcattgattaaaagctttaagaaaat
gaacatttgtatcttttaaaatggaatttctgaagtgctctaatctgcat
aattttaatttttagccattctattttgaaaattatttatatttagtatt
tatggaaaagtaaactttaaaagcgatattttacatgaaaataaattttt
gaaatttatacttttaaagtattcaaattgacttttcatttctgatcaaa
attaattcgtgtacctaaaatagcctttttcatctaagcaacttgttcat
taatctgtatcctaaacttttattgagtttacttctttcaggcttggtat
tcaatgtcactaaatccttaggtggagtaaggcaagggttgaaatgtgct
atcttcaaatcaaataggcccacttcttctggtgggtgggaggggtcagg
ttcaatactatctttggaagaattcactgtcggcccacacatgggacacc

gaattctttgtttagctctgttccccatttttaatagagttatttggttc
tctggagtctaactttttgagttctttgtatgtattggaaattagctctt
tattggatgtgggattggtaaagatctttttccaatctgttgtttgctgt
tttgtcttattgacagtgtcctttgccttagagaagctttgcaattttat
gaggtaccatttgttgattcttgatattagagcataaacaattggtgttc
tgttcaggaaattttaccctgtgcccatgtgttggaggcttttccctact
ttctattctattagattcagtgtatctgtttttatctggaggttcttgat
ccacttggatttgacctttgtacagggagataagaatgaatcaatttgca
ttcttctacatgttgacctccaattgaaccagcaccatttgttgaaaagg
ctgtctttttttcactggatggttttagctcctttgtcaaagatcaagtg
accataggaggttgggttcatttctggtcttcaattctattccactgatc
tacctgcttgtcactgtaccagtaccatgcagtttttatcactattggtc
tatagtacaggttgaggtcagggatgatgattcctccaaaaggtttttta
ttgttgagaatagtttttactatgctggcattctttgttactccaaatga
atttcagaattgctctttcaaactctacaaatacttgagttggaattttg
atgtggattgcattagatttctatattgcttttggcaagatggccatttt
tactatattaatcctgcccaatccatgagcatgggagatctttccatctt
ctgaggtctaagtattacatatctcatatatcaattatttcttctaggct
aagaaactaatacaataattatgtataaggatatacataggtacaaatag
tatatctattactcaaaaaattttctgattttatttatgcaaatttgatg
attgtacatcaaacatttacttaagtttattctatcagtggtaatactac
gtagacaatcacttttaaatcagcgtaattatttttttttatttttgaaa
tctatatcatcaatgcgtccacatatgtcctgcactgacaaatgaactac
tgtcaaatcctgtccccttttttcttagatttaaattgaaccactgaacc
cctccacgggcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24841364_24842524
seq2: B6Ng01-092K06.b_47_1196

seq1  GAATTCTAATGACTATCTCCACTTGAACCCTCAGAACTTTCAGATTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGACTATCTCCACTTGAACCCTCAGAACTTTCAGATTCATT  50

seq1  TTGTGAAACATGGAAAGTATGAAATCCGTGGCAATCCCACCCTTGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAACATGGAAAGTATGAAATCCGTGGCAATCCCACCCTTGAGAAC  100

seq1  CTGCTATACTTTTCCCAAAAATTCCGTTGCAGCTGTTTTGCCCACCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATACTTTTCCCAAAAATTCCGTTGCAGCTGTTTTGCCCACCTGAA  150

seq1  CTGTCAGGAGAGAGCTGACATAGAAAGTGTTAGCACTGTCAGTGTGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGAGAGAGCTGACATAGAAAGTGTTAGCACTGTCAGTGTGTGTA  200

seq1  CTCTGGAAGACATTTGCATCAATTCCCTTGTAATTTCAGACAAAAGCGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAGACATTTGCATCAATTCCCTTGTAATTTCAGACAAAAGCGAA  250

seq1  CTACCCAAGGACTGGAATCGCCCTTACTTTGTTAATAGCAATCAGTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAAGGACTGGAATCGCCCTTACTTTGTTAATAGCAATCAGTCAGA  300

seq1  TATTACATCATCTGCCACAGTGAGTCCATGTGTGCCAAGAAAAGATGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATCATCTGCCACAGTGAGTCCATGTGTGCCAAGAAAAGATGTCA  350

seq1  GTGGGTATCTCGTTGTTCTCTCTCTCTATTCACAGCATTTGAAATATTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTATCTCGTTGTTCTCTCTCTCTATTCACAGCATTTGAAATATTCG  400

seq1  CTATAGAGTTTTAACCACTCAAAAACTGGACACCACCTTTCAAAAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAGTTTTAACCACTCAAAAACTGGACACCACCTTTCAAAAATAAT  450

seq1  TCCATCTAAATAATCAGGATTATACTTTGAATTTCAGAGGCAAAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTAAATAATCAGGATTATACTTTGAATTTCAGAGGCAAAATATAT  500

seq1  ATTCTTATATATAAGAAATTCTGATTGTAAGGCTGTCATACTTTCAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATATATAAGAAATTCTGATTGTAAGGCTGTCATACTTTCAGGGT  550

seq1  TAATGGTCTACTGAGAAGAGTGAAGATTAAATAAAATCAAGTTGCTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTCTACTGAGAAGAGTGAAGATTAAATAAAATCAAGTTGCTATAA  600

seq1  ATGAATGTCTTTCAGTAATTTGTTTTTAGAAGTATGCTATTGGTTCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTCTTTCAGTAATTTGTTTTTAGAAGTATGCTATTGGTTCAAAT  650

seq1  TTGGCAATGTTTTTGATCAATTTATCATTGATTAAAAGCTTTAAGAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATGTTTTTGATCAATTTATCATTGATTAAAAGCTTTAAGAAAAT  700

seq1  GAACATTTGTATCTTTTAAAATGGAATTTCTGAAGTGCTCTAATCTGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTGTATCTTTTAAAATGGAATTTCTGAAGTGCTCTAATCTGCAT  750

seq1  AATTTTAATTTTTAGCCATTCTATTTTGAAAATTATTTATATTTAGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAATTTTTAGCCATTCTATTTTGAAAATTATTTATATTTAGTATT  800

seq1  TATGGAAAAGTAAACTTTAAAAGCGATATTTTACATGAAAATAAATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAAGTAAACTTTAAAAGCGATATTTTACATGAAAATAAATTTTT  850

seq1  GAAATTTATACTTTTAAAGTATTCAAATTGACTTTTCATTTCTGATCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTATACTTTTAAAGTATTCAAATTGACTTTTCATTTCTGATCAAA  900

seq1  ATTAATTCGTGTACCTAAAATAGCCTTTTTCATCTAAGCAACTTGTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCGTGTACCTAAAATAGCCTTTTTCATCTAAGCAACTTGTTCAT  950

seq1  TAATCTGTATCCTAAAACTTTTATTGAGTTTTACTTCTTTCAGGCTTGGT  1000
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  TAATCTGTATCCT-AAACTTTTATTGAG-TTTACTTCTTTCAGGCTTGGT  998

seq1  ATTCAATGTCACTAAATCCTTAGGTTGGAGTAAGGCAAGTG-TGAAATGT  1049
      |||||||||||||||||||||||| |||||||||||||| | ||||||||
seq2  ATTCAATGTCACTAAATCCTTAGG-TGGAGTAAGGCAAGGGTTGAAATGT  1047

seq1  GCTATCTTCAAAATCCAAATAGGCCCACTTCTTCCTTGGT-GGTGGGAGG  1098
      ||||||||||||   |||||||||||||||||||  |||| |||||||||
seq2  GCTATCTTCAAA--TCAAATAGGCCCACTTCTTC--TGGTGGGTGGGAGG  1093

seq1  GGTCAGGTTCAATTACTTATCTTTGGAAAGAATATCACTGTACAGCCCAC  1148
      |||||||||||| ||| ||||||||| |||||| ||||||| | ||||||
seq2  GGTCAGGTTCAA-TAC-TATCTTTGG-AAGAAT-TCACTGT-CGGCCCAC  1138

seq1  ACCATTGGACACC  1161
      | ||| |||||||
seq2  A-CATGGGACACC  1150