BAC Information

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BAC

Clone NameB6Ng01-092O23
Chromosome6 (Build37)
Map Location 36,253,639 - 36,254,616
singlet/doubletsinglet
Overlap gene9330158H04Rik
Upstream geneSlc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
Downstream geneChrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092O23.bB6Ng01-092O23.g
ACCDH904559DH904560
length9821,196
definitionDH904559|Mus musculus domesticus DNA, BAC clone: B6Ng01-092O23, 5' end.DH904560|Mus musculus domesticus DNA, BAC clone: B6Ng01-092O23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaaggtatgttgcctgagagccaagtaacatttggctctttc
tgaaatttatgtgattttagaatagtttttgttcctaatcaatatgcttg
taaatacacacataagtgcaaaagaatctgctacagaatatatgcagtta
gtgcacctcacctttattcctcactgtcattcagtctcggctccaaacct
acctccatgtcttcatgaaaatcaaaaagcatggtatttaataaaatgaa
ggagactgactagaacggcagtatacaaaaatctgtctctgtgtgtgtgc
gcatggtgtgtttgtgtgtgtgtgcacatgtgtgtgtgcacatgtgtgtg
tgtgtgcacatgtgtgtgtgccagagagatagggatagacagagacagat
acaaagagacaaagatagatacagagagagacagatacagagacagggag
acagatacagagagaaagagacagaaagacagagagacacagacagacaa
aatacagacacacacacagacacataaacacagagacagaaagacacaca
cagacaatacactaaccaacacacacacacacagaggattttatctaagg
aattggggaaatggagctgaagagggaggagagaaagagatgaacaagtg
tataacatgagtattggatatgtaatattttgttctttagtgcttttcat
gtttatagttttctataatgtatatgtgcagcttctataaaagtatagat
atataaattctaccatcataaatcccatgcaatatatttatctgacaact
ttactggtgcattatatacagcatggcatacataaagccttaatttagtt
cttgctttaggtgattgttttatgtttttgagaaaatagaatacagtttt
ctttgcctaggactaccaaactcagctgccagggagtggttttcaaattt
gcctggaaatttctacatctataaatgttgag
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttagtcatcagggaaattcaaatcaaaataacccttacat
tccacctcacaccagtcagaatggctaatatcgaaaattcaggtgacaga
agatgttggcaaggatgcagagaaagaggaacactcctccattgctggtg
ggattgcaagctcgtttaagcactctggaaattagtttggtggttcctct
gaaaattggacatagtactaccagaggatccagaaataccactcctgggc
atatacccagaagatgctccaacatgtaataaggacacatgctccactat
gttcatagcagctttatttatagtggccagaagctggaaagaaaccagat
ttccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattctcagacaa
gtgtatggatctggaggatatcaccctgagtgaggtaacccaatcacaga
agaactcacatgacatgcactcactgataagtagatattagccaagaacc
tacgaatacccaagatacaattcacaaaccacatgaaactcaagaagaag
gaagaccgaagtgtggatagtttgatccttcttagaagggggaacaaaat
aatcatggaaggagttacagtgacaaagtgtgaagcagagactaaaggaa
tgaccatccagagactgcccacctgaggatccattccataaacaaccagc
aaacccagacactattgtagatgcccacaagagcttgctgacagaagcat
gagatagctgtcttctgagaggatctgtcagtgcctggtaaatacagaag
tggatgctcacagccatccattggaccaagcacaagcctccctaatgaag
agctagagaaagttacccaaggaacctaagggtttgcctttctcgagaag
aacaaccatatgaactaaccagtaccttccagaccctcctggataactta
ccaacccaaagaaaaccctgtgggacctcatgttctagcctgccatatat
gccagagaatagtccatagatagtccatcaatgaggagccttgtccgtga
agctccctcattcctcaatgtaatggacatggtaccagggcccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_36253639_36254616
seq2: B6Ng01-092O23.b_49_1030 (reverse)

seq1  CTCAACATTTATAGATGTAGAAA-TTCCAGGCAAATTTG-AAACCACTCC  48
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CTCAACATTTATAGATGTAGAAATTTCCAGGCAAATTTGAAAACCACTCC  50

seq1  CTGGCAGCTGAGTTTGGTAGTCCTAGGCAA--GAAACTGTATTCTATTTT  96
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  CTGGCAGCTGAGTTTGGTAGTCCTAGGCAAAGAAAACTGTATTCTATTTT  100

seq1  CTCAAAAACATAAAACAATCACCTAAAGCAAGAACTAAATTAAGGCTTTA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAACATAAAACAATCACCTAAAGCAAGAACTAAATTAAGGCTTTA  150

seq1  TGTATGCCATGCTGTATATAATGCACCAGTAAAGTTGTCAGATAAATATA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCATGCTGTATATAATGCACCAGTAAAGTTGTCAGATAAATATA  200

seq1  TTGCATGGGATTTATGATGGTAGAATTTATATATCTATACTTTTATAGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGGGATTTATGATGGTAGAATTTATATATCTATACTTTTATAGAA  250

seq1  GCTGCACATATACATTATAGAAAACTATAAACATGAAAAGCACTAAAGAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACATATACATTATAGAAAACTATAAACATGAAAAGCACTAAAGAA  300

seq1  CAAAATATTACATATCCAATACTCATGTTATACACTTGTTCATCTCTTTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATTACATATCCAATACTCATGTTATACACTTGTTCATCTCTTTC  350

seq1  TCTCCTCCCTCTTCAGCTCCATTTCCCCAATTCCTTAGATAAAATCCTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCTCTTCAGCTCCATTTCCCCAATTCCTTAGATAAAATCCTCT  400

seq1  GTGTGTGTGTGTGTTGGTTAGTGTATTGTCTGTGTGTGTCTTTCTGTCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTTGGTTAGTGTATTGTCTGTGTGTGTCTTTCTGTCTC  450

seq1  TGTGTTTATGTGTCTGTGTGTGTGTCTGTATTTTGTCTGTCTGTGTCTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTATGTGTCTGTGTGTGTGTCTGTATTTTGTCTGTCTGTGTCTCT  500

seq1  CTGTCTTTCTGTCTCTTTCTCTCTGTATCTGTCTCCCTGTCTCTGTATCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCTGTCTCTTTCTCTCTGTATCTGTCTCCCTGTCTCTGTATCT  550

seq1  GTCTCTCTCTGTATCTATCTTTGTCTCTTTGTATCTGTCTCTGTCTATCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTCTGTATCTATCTTTGTCTCTTTGTATCTGTCTCTGTCTATCC  600

seq1  CTATCTCTCTGGCACACACACATGTGCACACACACACACATGTGCACACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTCTGGCACACACACATGTGCACACACACACACATGTGCACACA  650

seq1  CACATGTGCACACACACACAAACACACCATGCGCACACACACAGAGACAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGCACACACACACAAACACACCATGCGCACACACACAGAGACAG  700

seq1  ATTTTTGTATACTGCCGTTCTAGTCAGTCTCCTTCATTTTATTAAATACC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTATACTGCCGTTCTAGTCAGTCTCCTTCATTTTATTAAATACC  750

seq1  ATGCTTTTTGATTTTCATGAAGACATGGAGGTAGGTTTGGAGCCGAGACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTTGATTTTCATGAAGACATGGAGGTAGGTTTGGAGCCGAGACT  800

seq1  GAATGACAGTGAGGAATAAAGGTGAGGTGCACTAACTGCATATATTCTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACAGTGAGGAATAAAGGTGAGGTGCACTAACTGCATATATTCTGT  850

seq1  AGCAGATTCTTTTGCACTTATGTGTGTATTTACAAGCATATTGATTAGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATTCTTTTGCACTTATGTGTGTATTTACAAGCATATTGATTAGGA  900

seq1  ACAAAAACTATTCTAAAATCACATAAATTTCAGAAAGAGCCAAATGTTAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACTATTCTAAAATCACATAAATTTCAGAAAGAGCCAAATGTTAC  950

seq1  TTGGCTCTCAGGCAACATACCTTTCAGAATTC  978
      ||||||||||||||||||||||||||||||||
seq2  TTGGCTCTCAGGCAACATACCTTTCAGAATTC  982