BAC Information

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BAC

Clone NameB6Ng01-094B09
Chromosome6 (Build37)
Map Location 74,587,114 - 74,588,325
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094B09.bB6Ng01-094B09.g
ACCDH905397DH905398
length1,2551,183
definitionDH905397|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B09, 5' end.DH905398|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaaacaatctacagcaaacca
gtagccaacatcaaaggaaatggtgagaagctggaagcaatcccactaaa
atcatggactagacaaggctgcccactttctccctacctcttcaacatag
tacttgaagtcatagccagagcaattcgacaacaaaaggagatcaagggg
gtacaaattggaaaagaggaagtcaaaatatcactttttgcagatgaaat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaagtag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctttgcg
tgactctaactaaggaagtgaaaaatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaaaaagatctcagaagatggaaagatctcccatg
cctatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactgaattcttc
aactaattagaaagagcaatctgcaaattcatctggaataacaaaaaacc
taggatagcaaaagctcttctcaaggataaaagtacctctgctagaatca
ccatgcctgacctaaagctgtactacagagcaattgtgataaaaacagca
tggtactggtatagtgacagacaagtagaccaatggaatagaattgaaga
ctcagaaatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatccagtggaaaaagacagcattttcaacaaatggtgctggc
acactggttgttatcatgtagaagatgcgaatcgacccatttctctctcc
ttgtactaagtcaatctagtgatcaaggaactccacataaaatcagaaga
cactgaaactatagagagaaagtggggaaaagtctcaagaatgggcacag
gaaaaatttctgaatgaacagaattgctgtgctttagatcgaggatgaca
aatgggacctcatggactgcaatcttctgaaggcaaggattcgtcataac
aaagacaccaacgaatgggaaaggttctgttaccatactctaaattcagt
tgaac
gaattcatcgaaaatatacacatgacctatagacataaagcagtcaggaa
acactttcattggaaattactgaaaaaaaaaaacaaactaaagatataaa
tgaaaaacagatagatacatagatgtttgaaagtttcccttgttcatatt
atgatattttaagtaagcagaccttgggctttgtatataacccaaagacc
acagaaaatccatatagaatgtgaatgcattttccaaatgttctggcaat
atgagatcaaatttctgtactttatccaaaaaacttaaaaacaatactgg
aatatgataaatttatgttttaaaatctttctaatggctgagatataatt
gcattcatacttttctaacatgattccgtggtcccctaaaattacataaa
gttttaagaaacatgcagatatatcatgaatccaaatactgtttagaatc
taatttgttttggattattacttctgctttttatacattgatcatgaata
ttttcattccttctgtttcattttatttgatcatttcctccagaactatc
aacatccaagcaatttacctcaatcttctcagaatgttgtaataatatgc
aagtagcagacatcagacattaactaagcagaatgtttgagagcagagag
aatattgcttatggaacattatatatttacaaagcttgaaagtaaatgaa
agcctaggcttgaaatctgtattttacttaactgtagcagatgacttaga
catatatacctcgctgaaaattagaaccctttctatatcatttaccatgt
ctctaggtacttggagggtcaactgaattgactaaattcttctgatctta
tttcttcttttttcccttattcacataacaaggggaaaataatgagtttt
ttttgttggccatagatttgtatagaaaaaattgttaaaatactcaaata
ttttgatcattcttatttaaatctgcaaagatttcaataagaaactatat
atgtctcttcccgtcccttccagtattcgtcatgctttgttcacttttct
atttgttttaaaaatatctttggatttcatcaattgacatgaacatggag
tcaaagttgtgatcatcacgctagaagttcatttgtaaataaaccttcca
gtttcaccttgaagtttcccaattgcttcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74587114_74588325
seq2: B6Ng01-094B09.g_69_1251 (reverse)

seq1  AGCTGAAAGCAAATGTGGGAAACTTCTAAAGTTGAAAAACTGGGAAAGTT  50
      ||||| ||||||   |||||||||||  ||| ||  |||||||  ||| |
seq2  AGCTG-AAGCAA--TTGGGAAACTTC--AAGGTG--AAACTGG--AAGGT  41

seq1  TTATTTTACAAATGTGACTTCTAGC-TGTTGATTGATTCACAACTTTTGA  99
      ||| ||||||||||  ||||||||| || |||     ||||||| |||||
seq2  TTA-TTTACAAATG-AACTTCTAGCGTGATGA-----TCACAAC-TTTGA  83

seq1  CT-CATGTTCATGTCAATTTTGATGAAAATTCCAAAGGATA-TTATAAAA  147
      || ||||||||||||||  |||||||||  |||||| |||| || |||||
seq2  CTCCATGTTCATGTCAA--TTGATGAAA--TCCAAA-GATATTTTTAAAA  128

seq1  CAAATAGAAAAGTGAACAAAGCAATGAACGAATACTGGAAGGGGACGGGG  197
      |||||||||||||||||||||| ||| ||||||||||||| ||||| |||
seq2  CAAATAGAAAAGTGAACAAAGC-ATG-ACGAATACTGGAA-GGGAC-GGG  174

seq1  AAGAAGACATAATTATAGTTTCTTATTGAAATCTTTTGCAGATTTAAATA  247
      ||| |||||||  |||||||||||||||||||| ||||||||||||||||
seq2  AAG-AGACATA--TATAGTTTCTTATTGAAATC-TTTGCAGATTTAAATA  220

seq1  AGAATGATCAAAATATTTGAGTATTTTAACAATTTTTTTCTATTACAAAT  297
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  AGAATGATCAAAATATTTGAGTATTTTAACAA-TTTTTTCTA-TACAAAT  268

seq1  CTATGGCCAACAAAAAAAACTCATTATTTTCCCCTTGTTATGTGAATAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCCAACAAAAAAAACTCATTATTTTCCCCTTGTTATGTGAATAAG  318

seq1  GGAAAAAAGAAGAAATAAGATCAGAAGAATTTAGTCAATTCAGTTGACCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAGAAGAAATAAGATCAGAAGAATTTAGTCAATTCAGTTGACCC  368

seq1  TCCAAGTACCTAGAGACATGGTAAATGATATAGAAAGGGTTCTAATTTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTACCTAGAGACATGGTAAATGATATAGAAAGGGTTCTAATTTTC  418

seq1  AGCGAGGTATATATGTCTAAGTCATCTGCTACAGTTAAGTAAAATACAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGGTATATATGTCTAAGTCATCTGCTACAGTTAAGTAAAATACAGA  468

seq1  TTTCAAGCCTAGGCTTTCATTTACTTTCAAGCTTTGTAAATATATAATGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGCCTAGGCTTTCATTTACTTTCAAGCTTTGTAAATATATAATGT  518

seq1  TCCATAAGCAATATTCTCTCTGCTCTCAAACATTCTGCTTAGTTAATGTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAGCAATATTCTCTCTGCTCTCAAACATTCTGCTTAGTTAATGTC  568

seq1  TGATGTCTGCTACTTGCATATTATTACAACATTCTGAGAAGATTGAGGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTGCTACTTGCATATTATTACAACATTCTGAGAAGATTGAGGTA  618

seq1  AATTGCTTGGATGTTGATAGTTCTGGAGGAAATGATCAAATAAAATGAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTGGATGTTGATAGTTCTGGAGGAAATGATCAAATAAAATGAAA  668

seq1  CAGAAGGAATGAAAATATTCATGATCAATGTATAAAAAGCAGAAGTAATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAATGAAAATATTCATGATCAATGTATAAAAAGCAGAAGTAATA  718

seq1  ATCCAAAACAAATTAGATTCTAAACAGTATTTGGATTCATGATATATCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAACAAATTAGATTCTAAACAGTATTTGGATTCATGATATATCTG  768

seq1  CATGTTTCTTAAAACTTTATGTAATTTTAGGGGACCACGGAATCATGTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCTTAAAACTTTATGTAATTTTAGGGGACCACGGAATCATGTTA  818

seq1  GAAAAGTATGAATGCAATTATATCTCAGCCATTAGAAAGATTTTAAAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTATGAATGCAATTATATCTCAGCCATTAGAAAGATTTTAAAACA  868

seq1  TAAATTTATCATATTCCAGTATTGTTTTTAAGTTTTTTGGATAAAGTACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTATCATATTCCAGTATTGTTTTTAAGTTTTTTGGATAAAGTACA  918

seq1  GAAATTTGATCTCATATTGCCAGAACATTTGGAAAATGCATTCACATTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGATCTCATATTGCCAGAACATTTGGAAAATGCATTCACATTCT  968

seq1  ATATGGATTTTCTGTGGTCTTTGGGTTATATACAAAGCCCAAGGTCTGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATTTTCTGTGGTCTTTGGGTTATATACAAAGCCCAAGGTCTGCT  1018

seq1  TACTTAAAATATCATAATATGAACAAGGGAAACTTTCAAACATCTATGTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAATATCATAATATGAACAAGGGAAACTTTCAAACATCTATGTA  1068

seq1  TCTATCTGTTTTTCATTTATATCTTTAGTTTGTTTTTTTTTTTCAGTAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGTTTTTCATTTATATCTTTAGTTTGTTTTTTTTTTTCAGTAAT  1118

seq1  TTCCAATGAAAGTGTTTCCTGACTGCTTTATGTCTATAGGTCATGTGTAT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGAAAGTGTTTCCTGACTGCTTTATGTCTATAGGTCATGTGTAT  1168

seq1  ATTTTCGATGAATTC  1212
      |||||||||||||||
seq2  ATTTTCGATGAATTC  1183