BAC Information

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BAC

Clone NameB6Ng01-094C17
Chromosome6 (Build37)10 (Build37)
Map Location 110,597,237 - 110,597,96117,450,786 - 17,451,353
singlet/doubletsingletsinglet
Overlap geneGrm7
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094C17.bB6Ng01-094C17.g
ACCDH905459DH905460
length724780
definitionDH905459|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C17, 5' end.DH905460|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,597,237 - 110,597,961)(17,450,786 - 17,451,353)
sequence
gaattcaggctctagctgggaaacaagcctgctctgcccaaaaacagcgg
atgtgctaaagcgggttatgcaggtcttatgccctgggttcaaaaaggca
gatctagggctccaaccgccctgctctgcctttggtccctgcagcctctg
tctcctaaactgcactgcactgggtaaaaatggatagttttgagggttag
aaattgaattcagggaactctgacaaggtgtccttatgcttctctgtttc
cttgattggtttcccttcctcatatgaatttctcgacccctgtttccttt
tgtcactctcatgttcttgcctcagatcaggaagagtatgactttcttat
taacccaaggcttgctcactcctttggtggtatccagatccagccaaccc
tttctcttagctgtgcaagttggtgcctgcaggattgtgctgcccaagtc
taagaagtgactcttgctcacatgctttcccggatggtaggagttttatg
agggactcgttggtgcttgatgtccacgccaacaaaggacctgcttcata
ttccaagagaattttgtgctctaacaacatgagtgctcctctgaatctta
gtgggtcccttccatcaacacagcacaccaatggctcctgaatgtgcctg
ccccggagacttcttgctgcgtgccctctcctaaagtgatatgaaagcag
acttcactctacgtagcttgaatt
gaattctgatagaagggacatatgtgtgtatatatttaatacatatatat
atgtgtgtattattcaatacaatatattatagtgatatatatgtatatat
aatagaatgtgtggctatgtatcacaataaagtattatatgaatatgtat
atatgtatatatatatatatatatatatatatatatatatatatatataa
aaagttaaatctaatgggcagactcttctgtaattgttttatagccgtgc
gcttaataactgaggaccatgtaaagcaaggttcctcaccctttctaata
atgggacctcttcatacagttcctcatgttgtggtcattcccaaccttaa
tatgattttgttgttccttcctaactttaattttgctagtattctgaacc
gtaatgtaaatatctgcgttttctaagggttttcttaagagattcccgtg
aaagggttgaaactcacgggttgagaacggctaatatagagctttttctc
ctgtgcagtcggtgccatcttaagacgtcttggcttatctcaagagtgct
gtgtaagcaccatctccaagtcccaccgcagcctcccacgccctggagca
aatcgctttcttttctgaatgccacattcttaacttacgttggggatgat
acgggtttttgcggggaccgctgtattagagaaatgtgcacgcgtgaggc
gccttcttccaatttctgaagcacagttacgcactcaactgagccagcca
caagaaacttcatgtcaaggacgagatcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110597237_110597961
seq2: B6Ng01-094C17.b_37_760

seq1  GAATTCCAGGCTCTAAGCTGGGAAACTCAGTCTGCTCTGCCCAAGAACAG  50
      ||||| |||||||| |||||||||||  || ||||||||||||| |||||
seq2  GAATT-CAGGCTCT-AGCTGGGAAAC-AAGCCTGCTCTGCCCAAAAACAG  47

seq1  TGGATGTGCTAAAGCGGGTTATGCAGGTCTTATGCCCTGGGTTCAAAAAG  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGTGCTAAAGCGGGTTATGCAGGTCTTATGCCCTGGGTTCAAAAAG  97

seq1  GCAGATCTAGGGCTCCAACCGCAGTGCTCTGCCTTTGGTCCCTGCAGCCT  150
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  GCAGATCTAGGGCTCCAACCGCCCTGCTCTGCCTTTGGTCCCTGCAGCCT  147

seq1  CTGTCTCCTAGACTGCACTGCACTGGGTAGAAATGGATAGCTTTGAGGGT  200
      |||||||||| |||||||||||||||||| |||||||||| |||||||||
seq2  CTGTCTCCTAAACTGCACTGCACTGGGTAAAAATGGATAGTTTTGAGGGT  197

seq1  TAGAAATTGAGTTCAGGGAACTCTGACAAGGTGTCCTTATGCTTCTCTGT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTGAATTCAGGGAACTCTGACAAGGTGTCCTTATGCTTCTCTGT  247

seq1  TTCCTTGTTTGGTTTCCCTTCCTCATAGGCATTTCTCAACCCCTGTTTCC  300
      ||||||| ||||||||||||||||||| | ||||||| ||||||||||||
seq2  TTCCTTGATTGGTTTCCCTTCCTCATATGAATTTCTCGACCCCTGTTTCC  297

seq1  TTTTCTCACACTCATGTTCTTGCCTCAAGTCAGTTTGAGTATGACTTTCT  350
      |||| |||| |||||||||||||||||  ||||   ||||||||||||||
seq2  TTTTGTCACTCTCATGTTCTTGCCTCAGATCAGGAAGAGTATGACTTTCT  347

seq1  TATTAACCCAGGGCTTGCTCACTCCTTTGGTGGTAGCCAGATCCAGCCAA  400
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  TATTAACCCAAGGCTTGCTCACTCCTTTGGTGGTATCCAGATCCAGCCAA  397

seq1  CCCTTTCTCTTAGCTGTGCAAGTTGGTGCCTGCAGGATTGTGCTGCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTCTTAGCTGTGCAAGTTGGTGCCTGCAGGATTGTGCTGCCCAA  447

seq1  GTCTAAGAAGTGACTCTTGCTCACATGCTTTCCCGGAGGGTAGGAGTTTT  500
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTCTAAGAAGTGACTCTTGCTCACATGCTTTCCCGGATGGTAGGAGTTTT  497

seq1  ATGAGGGACCTGCTGGTGGGTGATGTCCAGGCCAGCAAAGGACCTGCATC  550
      |||||||||  | |||||  ||||||||| |||| |||||||||||| ||
seq2  ATGAGGGACTCGTTGGTGCTTGATGTCCACGCCAACAAAGGACCTGCTTC  547

seq1  AT-CTCCAGGAGAACTTTGTGCTCAAGCAGCAGGAGTGCTCCCCTGAAGC  599
      ||  |||| ||||| ||||||||| | || || ||||||||| ||||| |
seq2  ATATTCCAAGAGAATTTTGTGCTCTAACAACATGAGTGCTCCTCTGAATC  597

seq1  -TAGTGGGTCCCTTCTAATCAACAGAGCACACCAATGGCTCCTGAATGTG  648
       ||||||||||||||  ||||||| |||||||||||||||||||||||||
seq2  TTAGTGGGTCCCTTC-CATCAACACAGCACACCAATGGCTCCTGAATGTG  646

seq1  CCTG-CCCGGAGACTTCTTGCTGCTTGCACTCTCCTAAAGTGATTTGAGG  697
      |||| ||||||||||||||||||| ||| ||||||||||||||| |||  
seq2  CCTGCCCCGGAGACTTCTTGCTGCGTGCCCTCTCCTAAAGTGATATGAAA  696

seq1  GCAGACTTCACTCTAGGTTGCTTGAATT  725
      ||||||||||||||| || |||||||||
seq2  GCAGACTTCACTCTACGTAGCTTGAATT  724

seq1: chr10_17450786_17451353
seq2: B6Ng01-094C17.g_276_848 (reverse)

seq1  CCGATCTCGTCCTTGACACTGAGTTTCTTGTGGCTGGCTCAGTTGAGTGC  50
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  CCGATCTCGTCCTTGACATGAAGTTTCTTGTGGCTGGCTCAGTTGAGTGC  50

seq1  GT-ACTGTGCTTCAGAAATTGGAAGAAGGCGCCTCACGCGTGCACACTTC  99
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTAACTGTGCTTCAGAAATTGGAAGAAGGCGCCTCACGCGTGCACATTTC  100

seq1  TCTAATACAGCGGT-CCCGC-AAAACCCGTATCAT-CCCAACGTAAGTTA  146
      |||||||||||||| ||||| |||||||||||||| ||||||||||||||
seq2  TCTAATACAGCGGTCCCCGCAAAAACCCGTATCATCCCCAACGTAAGTTA  150

seq1  AGAATGTGGCATTCAGAAAAG-AAGCGATTTGCTCCAGGGCGTGGGAGGC  195
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAATGTGGCATTCAGAAAAGAAAGCGATTTGCTCCAGGGCGTGGGAGGC  200

seq1  TGCGGTGGGACTTGGAGATGGTGCTTACACAGCACTCTTGAGATAAGCCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTGGGACTTGGAGATGGTGCTTACACAGCACTCTTGAGATAAGCCA  250

seq1  AGACGTCTTAAGATGGCACCGACTGCACAGGAGAAAAAGCTCTATATTAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTCTTAAGATGGCACCGACTGCACAGGAGAAAAAGCTCTATATTAG  300

seq1  CCGTTCTCAACCCGTGAGTTTCAACCCTTTCACGGGAATCTCCTAAGAAA  345
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCGTTCTCAACCCGTGAGTTTCAACCCTTTCACGGGAATCTCTTAAGAAA  350

seq1  ACCCTTAGAAAACGCAGATATTTACATTACGGTTCAGAATACTAGCAAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTAGAAAACGCAGATATTTACATTACGGTTCAGAATACTAGCAAAA  400

seq1  TTAAAGTTAGGAAGGAACAACAAAATCATATTAAGGTTGGGAATGACCAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTAGGAAGGAACAACAAAATCATATTAAGGTTGGGAATGACCAC  450

seq1  AACATGAGGAACTGTATGAAGAGGTCCCATTATTAGAAAGGGTGAGGACC  495
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACATGAGGAACTGTATGAAGAGGTCCCATTATTAGAAAGGGTGAGGAAC  500

seq1  CCTGCTTTACATGGTCCTCAGCTATAAAGCGCACGGCTATAAAACAACTA  545
      | ||||||||||||||||||| ||| ||||||||||||||||||||| ||
seq2  CTTGCTTTACATGGTCCTCAGTTATTAAGCGCACGGCTATAAAACAATTA  550

seq1  CAGATGTGTCTGCCCATTCGATT  568
      |||| | ||||||||||| ||||
seq2  CAGAAGAGTCTGCCCATTAGATT  573