BAC Information

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BAC

Clone NameB6Ng01-094D17
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,452 - 18,835,96893,584,995 - 93,586,075
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094D17.bB6Ng01-094D17.g
ACCDH905507DH905508
length9841,070
definitionDH905507|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D17, 5' end.DH905508|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(93,584,995 - 93,586,075)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgata
ttctgaagtccactttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccacatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagattttaccttagtacaaggagataagtatggatcgattcgc
atttttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccatttg
gtctgcttgtctgtctctataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtctggcatggtgattccgccagaagttctt
ttatccttgagaagactttttgctatcctaggttttttgttattccagac
aaatttgcaaattgctccttccaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatcttccatctt
ctgagatcttccttaatttcttttcttcagagatttgaagttttatcata
cagatctttcacttccttagttagagtcacgccagatattttatattatt
tgtgactattgagaagggtgtgtttcccttaatt
gaattctctatttacacattaggtcttttattatgaaatttctgggatat
atatatatatatatatatgttgaatatcagccctcagtcagatgaaaggc
catgaaagggtgctgctaactggcttgtttctcatagcatgctcagccta
ccatccaaggattaccagcacacatatgacaccacccacaatgggctgga
ttctcccctatcagtcacttattaagcaaatgccttgcagttaaatattc
tggaggcattttactcaattaaggttccctcctctcagatacctctagtt
tgtgatgttaatatgagaccggccagcatgtttagtaaagctgggtatcc
cttgacttattaataatttgcacattctccttaacaatgatgtgcctgct
caactgctgttttaataattgctcaacctgtgtttttggcttgtttgttt
gttttttatttaatgtttgtgtgtttggtttcattttagatattaattca
tttaagaaggatgccatcaattcaaataaactcgtttcccagagcagcct
tactctgtatcctcggctaccacttcagcttaggttcttctgcctctgat
cttgaatataattttcagaaggacacctttgactttaccttcatagttca
tcttttggggagtcatatttaagggtgtggatgttgaagtgagatttgtg
agtttgttttggatttggagacagaatctccatatgtatgatggacacat
agatcaagcactcaggactctctgaatttcccaatgcaggccccttagaa
tatcacactttttaggtatatagagaaaacagttattttcaccccttcta
gacaggatttgattcattgttcacaatcttgtctataagcaattcctgag
acatctcagactatgtgaactaaaaacattaataaccctccacaaatgac
aaaccaatttcatgttgatttgagttctctccgcttcaccccattctctc
tcaggaacaaatgtctttacatggccttggcctgtttggaacttattctt
agatcaagttgacataaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-094D17.b_51_568 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| ||||||| |||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAAAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATGTGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      |||| ||||||||||||| |||||||||||||||||| ||||||||||||
seq2  AGAAAGTGGACTTCAGAATATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr3_93584995_93586075
seq2: B6Ng01-094D17.g_69_1138 (reverse)

seq1  TTTTTATGTCCAACTTGATCTAAAGAATAAGTTCCAAAACAGCCAAGGCC  50
      ||||||||| ||||||||||| ||||||||||||||||   |||||||||
seq2  TTTTTATGT-CAACTTGATCT-AAGAATAAGTTCCAAACAGGCCAAGGCC  48

seq1  ATGTAAAGACACTCTGTTTCATGAGAGAGATGGGGGCGAGGGGGGAGAGA  100
      ||||||||||| | || ||| |||||||||  |||| ||  | |||||||
seq2  ATGTAAAGACA-TTTG-TTCCTGAGAGAGAATGGGGTGA-AGCGGAGAGA  95

seq1  ACTCAAATCAACATGAAAATGGTTTGTCATTTTGTGGAGGGTTATTAATG  150
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  ACTCAAATCAACATGAAATTGGTTTGTCA-TTTGTGGAGGGTTATTAATG  144

seq1  TTTTTAGTTCACAATAGTCTTGAGATTGTCTCAGGAAATTGCTTATAGAC  200
      |||||||||||| |||||| ||||| ||||||||| ||||||||||||||
seq2  TTTTTAGTTCAC-ATAGTC-TGAGA-TGTCTCAGG-AATTGCTTATAGAC  190

seq1  AAGATTGTGAACAATGAATCAAAATCCTGTCTAGAAGGGGTGAAAATAAC  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGATTGTGAACAATGAATC-AAATCCTGTCTAGAAGGGGTGAAAATAAC  239

seq1  TGTTTTCTCTATATACCTAAAAAGTGTGATATTCTAAGGGGCCTGCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTCTATATACCTAAAAAGTGTGATATTCTAAGGGGCCTGCATTG  289

seq1  GGAAATTCAGAGAGTCCTGAGTGCTTGATCTATGTGTCCATCATACATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTCAGAGAGTCCTGAGTGCTTGATCTATGTGTCCATCATACATAT  339

seq1  GGAGATTCTGTCTCCAAATCCAAAACAAACTCACAAATCTCACTTCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTCTGTCTCCAAATCCAAAACAAACTCACAAATCTCACTTCAACA  389

seq1  TCCACACCCTTAAATATGACTCCCCAAAAGATGAACTATGAAGGTAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACCCTTAAATATGACTCCCCAAAAGATGAACTATGAAGGTAAAGT  439

seq1  CAAAGGTGTCCTTCTGAAAATTATATTCAAGATCAGAGGCAGAAGAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGTCCTTCTGAAAATTATATTCAAGATCAGAGGCAGAAGAACCT  489

seq1  AAGCTGAAGTGGTAGCCGAGGATACAGAGTAAGGCTGCTCTGGGAAACGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAGTGGTAGCCGAGGATACAGAGTAAGGCTGCTCTGGGAAACGA  539

seq1  GTTTATTTGAATTGATGGCATCCTTCTTAAATGAATTAATATCTAAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTGAATTGATGGCATCCTTCTTAAATGAATTAATATCTAAAATG  589

seq1  AAACCAAACACACAAACATTAAATAAAAAACAAACAAACAAGCCAAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAACACACAAACATTAAATAAAAAACAAACAAACAAGCCAAAAAC  639

seq1  ACAGGTTGAGCAATTATTAAAACAGCAGTTGAGCAGGCACATCATTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTGAGCAATTATTAAAACAGCAGTTGAGCAGGCACATCATTGTTA  689

seq1  AGGAGAATGTGCAAATTATTAATAAGTCAAGGGATACCCAGCTTTACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGTGCAAATTATTAATAAGTCAAGGGATACCCAGCTTTACTAA  739

seq1  ACATGCTGGCCGGTCTCATATTAACATCACAAACTAGAGGTATCTGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGGCCGGTCTCATATTAACATCACAAACTAGAGGTATCTGAGAG  789

seq1  GAGGGAACCTTAATTGAGTAAAATGCCTCCAGAATATTTAACTGCAAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACCTTAATTGAGTAAAATGCCTCCAGAATATTTAACTGCAAGGC  839

seq1  ATTTGCTTAATAAGTGACTGATAGGGGAGAATCCAGCCCATTGTGGGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTAATAAGTGACTGATAGGGGAGAATCCAGCCCATTGTGGGTGG  889

seq1  TGTCATATGTGTGCTGGTAATCCTTGGATGGTAGGCTGAGCATGCTATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATGTGTGCTGGTAATCCTTGGATGGTAGGCTGAGCATGCTATGA  939

seq1  GAAACAAGCCAGTTAGCAGCACCCTTTCATGGCCTTTCATCTGACTGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGCCAGTTAGCAGCACCCTTTCATGGCCTTTCATCTGACTGAGG  989

seq1  GCTGATATTCAACATATATATATATATATATATATCCCAGAAATTTCATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATATTCAACATATATATATATATATATATATCCCAGAAATTTCATA  1039

seq1  ATAAAAGACCTAATGTGTAAATAGAGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  ATAAAAGACCTAATGTGTAAATAGAGAATTC  1070