BAC Information

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BAC

Clone NameB6Ng01-094E12
Chromosome6 (Build37)14 (Build37)
Map Location 18,835,448 - 18,835,96895,367,723 - 95,368,870
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094E12.bB6Ng01-094E12.g
ACCDH905545DH905546
length9491,145
definitionDH905545|Mus musculus domesticus DNA, BAC clone: B6Ng01-094E12, 5' end.DH905546|Mus musculus domesticus DNA, BAC clone: B6Ng01-094E12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(95,367,723 - 95,368,870)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatctactttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatatat
gaattcctgtggccatttgaaatgtattagctttgcttctattagtttta
ttttgaagagcttggcaaaaagcaaggcagtgcaataaagagtttagaat
cagccttgtgaaaacacctgctaagagaggcactcttgaatccctagtct
atatttactgggaaatgtgtgggtctttgtaaggctttagaaaaaaagac
tcctttcagtgaaaaagccacatttatctagtagatacaaaatgttaggg
gtagttttaggatccccaaagtgaaaccagggagggagaaatgtcctatc
atgaatgtatattctgaaataatattatttatattttccaagaaattcta
caacattgatgggttctaaaaactacaagttgtatctcaaatctctgaca
tcttcatagttcattaatgaagcacccgacttctatgataaacttgtaca
ttacaaggctatttaaatgtgttcaatcattgtggcaagtagcgtaagtt
ttgaggatgatgaattaaatgtacatgactgttttgattaaagtctattc
cttcataatatttgggtcaataaattatatttacaaagacttataccttc
attgctataaataatgagtattattaatgggttctatgtcagttgaacac
tatattaactataatcacttaacaaattttacgtcttaaaacatggtatt
cttccattgattctaaaacataagtgataacattattagttgtggtattt
tttgagagagtgaattttgatgatggttttcaattgagttgaacccccta
ccctcctatactaggcctagttatattggatgaaatttgtcaggaaattg
ctcaatgatttgagacttaggactccttatcagaaaggtcctttgtctcc
ctctagtatatttgatgcagtatgcagtgcagggattattatacttatta
tacttcttaagaccatgaagtctaccattcccgttgttgtagctaaatgg
ttgttaaatcaagaaatgagttttacattggtgtcattgaaggcaatgcc
tccaaatcaatggtagagacgtccatggtggctaataaagttttgagaag
aggcctgctcctgataaggctcagaatacttggaggtcattctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-094E12.b_46_567 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr14_95367723_95368870
seq2: B6Ng01-094E12.g_70_1214

seq1  GAATTCCTGTGGCCATTTGAAATGTATTAGCTTTGCTTCTATTAGTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGCCATTTGAAATGTATTAGCTTTGCTTCTATTAGTTTTA  50

seq1  TTTTGAAGAGCTTGGCAAAAAGCAAGGCAGTGCAATAAAGAGTTTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGAGCTTGGCAAAAAGCAAGGCAGTGCAATAAAGAGTTTAGAAT  100

seq1  CAGCCTTGTGAAAACACCTGCTAAGAGAGGCACTCTTGAATCCCTAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTGTGAAAACACCTGCTAAGAGAGGCACTCTTGAATCCCTAGTCT  150

seq1  ATATTTACTGGGAAATGTGTGGGTCTTTGTAAGGCTTTAGAAAAAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTGGGAAATGTGTGGGTCTTTGTAAGGCTTTAGAAAAAAAGAC  200

seq1  TCCTTTCAGTGAAAAAGCCACATTTATCTAGTAGATACAAAATGTTAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAGTGAAAAAGCCACATTTATCTAGTAGATACAAAATGTTAGGG  250

seq1  GTAGTTTTAGGATCCCCAAAGTGAAACCAGGGAGGGAGAAATGTCCTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTAGGATCCCCAAAGTGAAACCAGGGAGGGAGAAATGTCCTATC  300

seq1  ATGAATGTATATTCTGAAATAATATTATTTATATTTTCCAAGAAATTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTATATTCTGAAATAATATTATTTATATTTTCCAAGAAATTCTA  350

seq1  CAACATTGATGGGTTCTAAAAACTACAAGTTGTATCTCAAATCTCTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGATGGGTTCTAAAAACTACAAGTTGTATCTCAAATCTCTGACA  400

seq1  TCTTCATAGTTCATTAATGAAGCACCCGACTTCTATGATAAACTTGTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAGTTCATTAATGAAGCACCCGACTTCTATGATAAACTTGTACA  450

seq1  TTACAAGGCTATTTAAATGTGTTCAATCATTGTGGCAAGTAGCGTAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGGCTATTTAAATGTGTTCAATCATTGTGGCAAGTAGCGTAAGTT  500

seq1  TTGAGGATGATGAATTAAATGTACATGACTGTTTTGATTAAAGTCTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGATGATGAATTAAATGTACATGACTGTTTTGATTAAAGTCTATTC  550

seq1  CTTCATAATATTTGGGTCAATAAATTATATTTACAAAGACTTATACCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAATATTTGGGTCAATAAATTATATTTACAAAGACTTATACCTTC  600

seq1  ATTGCTATAAATAATGAGTATTATTAATGGGTTCTATGTCAGTTGAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATAAATAATGAGTATTATTAATGGGTTCTATGTCAGTTGAACAC  650

seq1  TATATTAACTATAATCACTTAACAAATTTTACGTCTTAAAACATGGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAACTATAATCACTTAACAAATTTTACGTCTTAAAACATGGTATT  700

seq1  CTTCCATTGATTCTAAAACATAAGTGATAACATTATTAGTTGTGGTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTGATTCTAAAACATAAGTGATAACATTATTAGTTGTGGTATTT  750

seq1  TTTGAGAGAGTGAATTTTGATGATGGTTTTCAATTGAGTTGAACCCCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGAGTGAATTTTGATGATGGTTTTCAATTGAGTTGAACCCCCTA  800

seq1  CCCTCCTATACTAGGCCTAGTTATATTGGATGAAATTTGTCAGGGAAATT  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCCTCCTATACTAGGCCTAGTTATATTGGATGAAATTTGTCA-GGAAATT  849

seq1  GCTCAATGATTTGAGACTTAGGACTCCTTATCAGAAAGGTCCTTTGTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATGATTTGAGACTTAGGACTCCTTATCAGAAAGGTCCTTTGTCTC  899

seq1  CCTCTAGTATATTTGATGCAGTATGCAGTGCAGGGATTATTATACTTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGTATATTTGATGCAGTATGCAGTGCAGGGATTATTATACTTATT  949

seq1  ATACTTCTTAAGACCATGAAGTCTACCA-TCCCGTTGTTGTAGGCTAAAT  999
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  ATACTTCTTAAGACCATGAAGTCTACCATTCCCGTTGTTGTA-GCTAAAT  998

seq1  GGTTGTTAAATCAGGAAATGAGTTTAACATGGTGGTCATTG-AGGCAATG  1048
      ||||||||||||| ||||||||||| |||| |  ||||||| ||||||||
seq2  GGTTGTTAAATCAAGAAATGAGTTTTACATTGGTGTCATTGAAGGCAATG  1048

seq1  CCTCCAAAATCAAGTGTAGAGACGT-CAGTGTGGCTAATAAAGTTATGAG  1097
      ||||| |||||||  |||||||||| ||  ||||||||||||||| ||||
seq2  CCTCC-AAATCAATGGTAGAGACGTCCATGGTGGCTAATAAAGTTTTGAG  1097

seq1  AGAGAGCCTGGCTCCTGATAGAGCTCAGAATCACCTTGGAGGTCATTCTG  1147
      | |||| |  ||||||||||  |||||||||   ||||||||||||||||
seq2  A-AGAGGCCTGCTCCTGATAAGGCTCAGAAT--ACTTGGAGGTCATTCTG  1144

seq1  A  1148
      |
seq2  A  1145