BAC Information

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BAC

Clone NameB6Ng01-094G09
Chromosome6 (Build37)
Map Location 49,472,746 - 49,473,563
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666005, Atp6v0e2, Lrrc61, Rarres2, EG330305, Repin1, Zfp775, AI854703, Gimap8, LOC100040560, Gimap9, Gimap4, Gimap6, Gimap7, LOC100041450, Gimap1, Gimap5, Gimap3, Tmem176b, Tmem176a, EG666105, Abp1, 1600015I10Rik, LOC100040589, Doxl2, Svs1, Gpnmb, LOC666011, Igf2bp3, LOC100040626, Tra2a, Ccdc126, D330028D13Rik, Stk31
Downstream geneLOC384383, LOC666210, Npy, LOC100041653, LOC624524, Mpp6, Dfna5h, LOC100041681, Osbpl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G09.bB6Ng01-094G09.g
ACCDH905633DH905634
length1,1111,229
definitionDH905633|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G09, 5' end.DH905634|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcttagctctgtgccccatttttaatagggttatttgtttt
tctggagtccatcttcttgagttctttgtatatattggatattagtcccc
tgcaacattcttttaataagggttcaacctctcctctagcccaccaccca
gcagaggtagtggaagaaaaagttattaggaaagtgggtaattggaccta
ttcagcagtagttctttggggacaagctggattttctttggtagcagttc
agtcctgttgagtcatgactcagcagctgcagaccagttgtctaggtagg
cagacaccaggcatgaaccagcagctgcagtccaatcctttcagcaagca
agcaccaggcagctcaagttcaacctgaacaaactgccaggctttccaac
cagcctagggtgaggctgcagaggcaacaagctgctgcaggaacctcacg
agcagttcttgggagagtttctctcaatggtagcattatcacaggttaag
ctcaacaatacaatgtaaggcaaaccaattcatgtgggtcgttatcaaag
aatagcaaggcacagcaaaccaagccaaagctcagggctcatcccccact
gtccgtggggtcatatttgtacaccttcatcaagagtcctttcatgtgtc
tgctatatccaaacatccttttacctgtctgcttcaggaaaacagccttt
catgtgtctgctttagcaagacatcctttcacctgtgtgcctcagcaaaa
cattatttgacataaactgaactttccaaagagctagacatttccacttc
atgaaagttcttgggatttgggcacaagtgaagaaatctctttcccaagt
agtttggtgttagagagtacaagtggtggagacaagaacaaacactgggg
gcctctgttgctctacagaaaagaattctggacagtaagctcacagcatc
ggtagagggtgaaaagagccacatgatttttgcccagctctctgcagttg
agtgtttctggctttagagatactgctgggcaggaagcattttcttgagt
catgaactgttgctttgcatacctgcctgaggatcctcagtctcttcagt
tctctctcctc
gaattccttctttatgtcctctaccatcatcatgaaatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacagaatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgcagcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaggatggtgccgccccagaatctctgcgactctc
tcgcccgtcccagaaacggctggcactctgtattccacacggtcacccgt
gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc
ctgtgccacaaacctctcaggccaggcagacccccgtgctctcaccagga
aagtggccggctgtctggagctgaagatggcgccgccagaagctctgcga
ctctctcgcccgtcccagaaacagctggcactctgtattccacacggtca
cccgtgcagcctgccctccgcggagtcccggagccaagaagctcccgccg
gcgcctgtgccacaacctctcaggccaggtagacccccgtgctctcacca
ggaagtggccgctgtctggagctgagatggcgccgcccagagctctgcta
ctctctcgcccgtcccagaaacagctgcactctgtattcacacgtcaccc
gtgcagcttgccctccgcggagtcccggaacagaatgcttctgccggcac
gggcaaaaactctcaagcctagcaaccccagtcttcacagagggccgctt
tctggactagatgggcgcccgatgcttgcgaactctctgccttcgtaaac
gatggtaacttgataccacgttacagtgcactctccttccgaatctgagc
cacgatagttctccgtctgcctgtgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_49472746_49473563
seq2: B6Ng01-094G09.b_349_1155

seq1  CACCAGGCATGAACCAGCAGCTGCAGTCCAATCCTTTCAGCAAGCAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCATGAACCAGCAGCTGCAGTCCAATCCTTTCAGCAAGCAAGCA  50

seq1  CCAGGCAGCTCAAGTTCAACCTGAACAAACTGCCAGGCTTTCCAACCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGCTCAAGTTCAACCTGAACAAACTGCCAGGCTTTCCAACCAGC  100

seq1  CTAGGGTGAGGCTGCAGAGGCAACAAGCTGCTGCAGGAACCTCACGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTGAGGCTGCAGAGGCAACAAGCTGCTGCAGGAACCTCACGAGCA  150

seq1  GTTCTTGGGAGAGTTTCTCTCAATGGTAGCATTATCACAGGTTAAGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGGAGAGTTTCTCTCAATGGTAGCATTATCACAGGTTAAGCTCA  200

seq1  ACAATACAATGTAAGGCAAACCAATTCATGTGGGTCGTTATCAAAGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACAATGTAAGGCAAACCAATTCATGTGGGTCGTTATCAAAGAATA  250

seq1  GCAAGGCACAGCAAACCAAGCCAAAGCTCAGGGCTCATCCCCCACTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCACAGCAAACCAAGCCAAAGCTCAGGGCTCATCCCCCACTGTCC  300

seq1  GTGGGGTCATATTTGTACACCTTCATCAAGAGTCCTTTCATGTGTCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTCATATTTGTACACCTTCATCAAGAGTCCTTTCATGTGTCTGCT  350

seq1  ATATCCAAACATCCTTTTACCTGTCTGCTTCAGGAAAACAGCCTTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAAACATCCTTTTACCTGTCTGCTTCAGGAAAACAGCCTTTCATG  400

seq1  TGTCTGCTTTAGCAAGACATCCTTTCACCTGTGTGCCTCAGCAAAACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTTAGCAAGACATCCTTTCACCTGTGTGCCTCAGCAAAACATT  450

seq1  ATTTGACATAAACTGAACTTTCCAAAGAGCTAGACATTTCCACTTCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACATAAACTGAACTTTCCAAAGAGCTAGACATTTCCACTTCATGA  500

seq1  AAGTTCTTGGGATTTGGGCACAAGGTGAAGAAATCTCTTTCCCAAGTAGT  550
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTTCTTGGGATTTGGGCACAA-GTGAAGAAATCTCTTTCCCAAGTAGT  549

seq1  TTGGTGTTAGAGAGTACAAGTGGTGGAGACAAGAACAAACACTGGGGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTAGAGAGTACAAGTGGTGGAGACAAGAACAAACACTGGGGGCC  599

seq1  TCTGTTGCTCTACAGAAAAGAATTCTGGACAGTAAGCTCACAGCATCGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGCTCTACAGAAAAGAATTCTGGACAGTAAGCTCACAGCATCGGT  649

seq1  AGAGGGTGAAAAGAGCCACATGATTTTTGCCCAGCTCTTCTGCAGTTGAG  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAGGGTGAAAAGAGCCACATGATTTTTGCCCAGCTC-TCTGCAGTTGAG  698

seq1  TGTTTCTGGCTTTAGAGATACTGGCTGGCCAGGAAGGCATTTTCTTGAAG  750
      |||||||||||||||||||||| ||||| |||||| ||||||||||| ||
seq2  TGTTTCTGGCTTTAGAGATACT-GCTGGGCAGGAA-GCATTTTCTTG-AG  745

seq1  TCATAGACTGGTGCTTTTGCATACCTGCCTGAGGAATCCTCAGTCTCCCT  800
      ||||  |||| ||| ||||||||||||||||||| ||||||||||||   
seq2  TCATGAACTGTTGC-TTTGCATACCTGCCTGAGG-ATCCTCAGTCTC---  790

seq1  TTCCAGTCTCTCTTCCTC  818
      |||   |||||| |||||
seq2  TTCAGTTCTCTC-TCCTC  807